RNA–Protein interactions for RNA: ENST00000627532.2

ZEB2-227, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 9,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-227ENST00000627532 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.81e-18■■■■□ 23.9
ZEB2-227ENST00000627532 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.23□□□□□ -1.092e-17■■□□□ 12.7
ZEB2-227ENST00000627532 NIPBLQ6KC79 2804 aaeCLIP4.39□□□□□ -1.714e-11■□□□□ 10.6
ZEB2-227ENST00000627532 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.961e-9■■■■■ 92
ZEB2-227ENST00000627532 PUM1Q14671 1186 aaKnown RBP eCLIP8.23□□□□□ -1.092e-9■□□□□ 10.7
ZEB2-227ENST00000627532 SRSF1Q07955 248 aaKnown RBP eCLIP7.04□□□□□ -1.289e-9■■□□□ 11.9
ZEB2-227ENST00000627532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.57□□□□□ -1.21e-8■■□□□ 11.6
ZEB2-227ENST00000627532 DDX6P26196 483 aaKnown RBP eCLIP8.31□□□□□ -1.083e-8■□□□□ 9.5
ZEB2-227ENST00000627532 EFTUD2Q15029 972 aaKnown RBP eCLIP8.59□□□□□ -1.035e-8■□□□□ 8.4
ZEB2-227ENST00000627532 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.928e-8■■■■□ 23.1
ZEB2-227ENST00000627532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.89□□□□□ -0.839e-8■■■□□ 16.5
ZEB2-227ENST00000627532 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.791e-7■■■■□ 21.2
ZEB2-227ENST00000627532 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■□□□ 12.1
ZEB2-227ENST00000627532 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.93e-7■■■□□ 16.3
ZEB2-227ENST00000627532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.25□□□□□ -0.933e-7■■■□□ 16.4
ZEB2-227ENST00000627532 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.87□□□□□ -1.153e-7■■■□□ 15.7
ZEB2-227ENST00000627532 PTBP1P26599 531 aaKnown RBP eCLIP7.7□□□□□ -1.183e-7■■■■□ 19.3
ZEB2-227ENST00000627532 AGGF1Q8N302 714 aaeCLIP8.59□□□□□ -1.034e-7■■□□□ 13.6
ZEB2-227ENST00000627532 TRA2AQ13595 282 aaKnown RBP eCLIP6.83□□□□□ -1.326e-7■□□□□ 10
ZEB2-227ENST00000627532 NONOQ15233 471 aaKnown RBP eCLIP9.14□□□□□ -0.957e-7■■□□□ 14.3
ZEB2-227ENST00000627532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.05□□□□□ -1.127e-7■■■□□ 15.3
ZEB2-227ENST00000627532 RBM15Q96T37 977 aaKnown RBP eCLIP8.18□□□□□ -1.18e-7■■■□□ 16.8
ZEB2-227ENST00000627532 TARDBPQ13148 414 aaKnown RBP eCLIP7.79□□□□□ -1.169e-7■■■■□ 19.4
ZEB2-227ENST00000627532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.9□□□□□ -1.149e-7■■□□□ 13.6
ZEB2-227ENST00000627532 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.191e-6■■■□□ 14.9
ZEB2-227ENST00000627532 HNRNPLP14866 589 aaKnown RBP eCLIP7.74□□□□□ -1.171e-6■■■□□ 15.7
ZEB2-227ENST00000627532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.88□□□□□ -1.151e-6■■■□□ 16.4
ZEB2-227ENST00000627532 AQRO60306 1485 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■■□□ 19.1
ZEB2-227ENST00000627532 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.281e-6■■■□□ 14.8
ZEB2-227ENST00000627532 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.71□□□□□ -1.012e-6■□□□□ 9.4
ZEB2-227ENST00000627532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.79□□□□□ -0.842e-6■■■■■ 70.6
ZEB2-227ENST00000627532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.21□□□□□ -1.12e-6■■■□□ 15
ZEB2-227ENST00000627532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■□□□□ 10.3
ZEB2-227ENST00000627532 SF3B4Q15427 424 aaKnown RBP eCLIP7.73□□□□□ -1.172e-6■■■■□ 19.7
ZEB2-227ENST00000627532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.25□□□□□ -0.932e-6■■□□□ 11.4
ZEB2-227ENST00000627532 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.35□□□□□ -1.232e-6■■■■□ 26.2
ZEB2-227ENST00000627532 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.89□□□□□ -1.152e-6■□□□□ 10.2
ZEB2-227ENST00000627532 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.79□□□□□ -12e-6■■□□□ 13.1
ZEB2-227ENST00000627532 MATR3P43243 847 aaKnown RBP eCLIP9.19□□□□□ -0.942e-6■■■□□ 18.3
ZEB2-227ENST00000627532 SF3B1O75533 1304 aaKnown RBP eCLIP8.67□□□□□ -1.023e-6■■■■■ 39.2
ZEB2-227ENST00000627532 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.133e-6■■■■■ 40.8
ZEB2-227ENST00000627532 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.96□□□□□ -0.983e-6■■■■■ 46.1
ZEB2-227ENST00000627532 HNRNPKP61978 463 aaKnown RBP eCLIP8□□□□□ -1.133e-6■■■□□ 15.5
ZEB2-227ENST00000627532 FTOQ9C0B1 505 aaKnown RBP eCLIP8.46□□□□□ -1.054e-6■■■□□ 16.5
ZEB2-227ENST00000627532 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.87□□□□□ -1.155e-6■■■■■ 56.5
ZEB2-227ENST00000627532 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.885e-6■■□□□ 14.2
ZEB2-227ENST00000627532 SRSF7Q16629 238 aaKnown RBP eCLIP6.68□□□□□ -1.346e-6■□□□□ 11.2
ZEB2-227ENST00000627532 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.017e-6■■■■□ 20.7
ZEB2-227ENST00000627532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.56□□□□□ -1.047e-6■■■□□ 16.3
ZEB2-227ENST00000627532 GPKOWQ92917 476 aaPredicted RBP eCLIP7.91□□□□□ -1.147e-6■□□□□ 8.1
ZEB2-227ENST00000627532 ILF3Q12906 894 aaKnown RBP eCLIP8.57□□□□□ -1.041e-5■■■■□ 19.3
Retrieved 51 of 51 RNA–protein pairs in 31.9 ms