RNA–Protein interactions for RNA: ENST00000613657.4

PCDH15-226, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 6,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-226ENST00000613657 NISCHQ9Y2I1 1504 aa16.08■□□□□ 0.16
PCDH15-226ENST00000613657 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
PCDH15-226ENST00000613657 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
PCDH15-226ENST00000613657 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
PCDH15-226ENST00000613657 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
PCDH15-226ENST00000613657 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
PCDH15-226ENST00000613657 NACADO15069 1562 aa13.14□□□□□ -0.31
PCDH15-226ENST00000613657 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
PCDH15-226ENST00000613657 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
PCDH15-226ENST00000613657 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.36
PCDH15-226ENST00000613657 ABCC9O60706 1549 aa12.76□□□□□ -0.37
PCDH15-226ENST00000613657 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
PCDH15-226ENST00000613657 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.4
PCDH15-226ENST00000613657 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
PCDH15-226ENST00000613657 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
PCDH15-226ENST00000613657 EEA1Q15075 1411 aa12.39□□□□□ -0.43
PCDH15-226ENST00000613657 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
PCDH15-226ENST00000613657 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PCDH15-226ENST00000613657 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
PCDH15-226ENST00000613657 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
PCDH15-226ENST00000613657 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
PCDH15-226ENST00000613657 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
PCDH15-226ENST00000613657 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
PCDH15-226ENST00000613657 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
PCDH15-226ENST00000613657 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
PCDH15-226ENST00000613657 MYT1Q01538 1121 aa12.05□□□□□ -0.48
PCDH15-226ENST00000613657 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
PCDH15-226ENST00000613657 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
PCDH15-226ENST00000613657 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
PCDH15-226ENST00000613657 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
PCDH15-226ENST00000613657 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
PCDH15-226ENST00000613657 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
PCDH15-226ENST00000613657 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
PCDH15-226ENST00000613657 APLP2Q06481 763 aa11.92□□□□□ -0.5
PCDH15-226ENST00000613657 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
PCDH15-226ENST00000613657 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
PCDH15-226ENST00000613657 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
PCDH15-226ENST00000613657 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
PCDH15-226ENST00000613657 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
PCDH15-226ENST00000613657 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
PCDH15-226ENST00000613657 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
PCDH15-226ENST00000613657 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
PCDH15-226ENST00000613657 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
PCDH15-226ENST00000613657 CFTRP13569 1480 aa11.83□□□□□ -0.52
PCDH15-226ENST00000613657 WIZO95785 1651 aa11.8□□□□□ -0.52
PCDH15-226ENST00000613657 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
PCDH15-226ENST00000613657 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
PCDH15-226ENST00000613657 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
PCDH15-226ENST00000613657 CLIP1P30622 1438 aa11.63□□□□□ -0.55
PCDH15-226ENST00000613657 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 HRCP23327 699 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 KIF21BO75037 1637 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.55
PCDH15-226ENST00000613657 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.55
PCDH15-226ENST00000613657 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
PCDH15-226ENST00000613657 LOC105371045A0A1W2PR82 267 aa11.57□□□□□ -0.56
PCDH15-226ENST00000613657 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
PCDH15-226ENST00000613657 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
PCDH15-226ENST00000613657 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
PCDH15-226ENST00000613657 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
PCDH15-226ENST00000613657 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 CUX2O14529 1486 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 SOGA1O94964 1423 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
PCDH15-226ENST00000613657 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 MAP3K1Q13233 1512 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
PCDH15-226ENST00000613657 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
PCDH15-226ENST00000613657 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
PCDH15-226ENST00000613657 IGF1RP08069 1367 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 EFCAB5A4FU69 1503 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
PCDH15-226ENST00000613657 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
PCDH15-226ENST00000613657 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
PCDH15-226ENST00000613657 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
PCDH15-226ENST00000613657 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCDH15-226ENST00000613657 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
PCDH15-226ENST00000613657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCDH15-226ENST00000613657 CUX1P39880 1505 aa11.36□□□□□ -0.59
PCDH15-226ENST00000613657 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
PCDH15-226ENST00000613657 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-226ENST00000613657 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-226ENST00000613657 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
PCDH15-226ENST00000613657 CUL7Q14999 1698 aa11.3□□□□□ -0.6
PCDH15-226ENST00000613657 GAPVD1Q14C86 1478 aa11.3□□□□□ -0.6
PCDH15-226ENST00000613657 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
PCDH15-226ENST00000613657 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
PCDH15-226ENST00000613657 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
PCDH15-226ENST00000613657 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
PCDH15-226ENST00000613657 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
PCDH15-226ENST00000613657 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms