RNA–Protein interactions for RNA: ENST00000604842.1

AP004372.1-201, humanhuman

BASIC

Gene AP004372.1, Length 844 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004372.1-201ENST00000604842 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
AP004372.1-201ENST00000604842 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
AP004372.1-201ENST00000604842 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
AP004372.1-201ENST00000604842 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
AP004372.1-201ENST00000604842 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
AP004372.1-201ENST00000604842 ADRA2BP18089 450 aa15.53■□□□□ 0.08
AP004372.1-201ENST00000604842 FOXD1Q16676 465 aa15.37■□□□□ 0.05
AP004372.1-201ENST00000604842 PPP6R1Q9UPN7 881 aa15.33■□□□□ 0.04
AP004372.1-201ENST00000604842 KCNA4P22459 653 aa15.22■□□□□ 0.03
AP004372.1-201ENST00000604842 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
AP004372.1-201ENST00000604842 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
AP004372.1-201ENST00000604842 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
AP004372.1-201ENST00000604842 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
AP004372.1-201ENST00000604842 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
AP004372.1-201ENST00000604842 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
AP004372.1-201ENST00000604842 MSH5O43196 834 aa14.26□□□□□ -0.13
AP004372.1-201ENST00000604842 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
AP004372.1-201ENST00000604842 ZBTB22O15209 634 aa14.09□□□□□ -0.15
AP004372.1-201ENST00000604842 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
AP004372.1-201ENST00000604842 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
AP004372.1-201ENST00000604842 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
AP004372.1-201ENST00000604842 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
AP004372.1-201ENST00000604842 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
AP004372.1-201ENST00000604842 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
AP004372.1-201ENST00000604842 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
AP004372.1-201ENST00000604842 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
AP004372.1-201ENST00000604842 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
AP004372.1-201ENST00000604842 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
AP004372.1-201ENST00000604842 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
AP004372.1-201ENST00000604842 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
AP004372.1-201ENST00000604842 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
AP004372.1-201ENST00000604842 FKBP8Q14318 412 aa13.08□□□□□ -0.32
AP004372.1-201ENST00000604842 MYCNP04198 464 aaPredicted RBP13.07□□□□□ -0.32
AP004372.1-201ENST00000604842 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
AP004372.1-201ENST00000604842 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
AP004372.1-201ENST00000604842 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
AP004372.1-201ENST00000604842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.39
AP004372.1-201ENST00000604842 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
AP004372.1-201ENST00000604842 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
AP004372.1-201ENST00000604842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
AP004372.1-201ENST00000604842 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
AP004372.1-201ENST00000604842 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
AP004372.1-201ENST00000604842 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
AP004372.1-201ENST00000604842 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
AP004372.1-201ENST00000604842 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
AP004372.1-201ENST00000604842 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
AP004372.1-201ENST00000604842 PROM2Q8N271 834 aa12.19□□□□□ -0.46
AP004372.1-201ENST00000604842 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
AP004372.1-201ENST00000604842 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
AP004372.1-201ENST00000604842 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
AP004372.1-201ENST00000604842 APLP2Q06481 763 aa12.1□□□□□ -0.47
AP004372.1-201ENST00000604842 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
AP004372.1-201ENST00000604842 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
AP004372.1-201ENST00000604842 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
AP004372.1-201ENST00000604842 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
AP004372.1-201ENST00000604842 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
AP004372.1-201ENST00000604842 FBLN2P98095 1184 aa12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 PKD2Q13563 968 aa12.02□□□□□ -0.49
AP004372.1-201ENST00000604842 POLA2Q14181 598 aa12□□□□□ -0.49
AP004372.1-201ENST00000604842 CAPN15O75808 1086 aa11.88□□□□□ -0.51
AP004372.1-201ENST00000604842 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
AP004372.1-201ENST00000604842 ABCB7O75027 752 aa11.82□□□□□ -0.52
AP004372.1-201ENST00000604842 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
AP004372.1-201ENST00000604842 BCANQ96GW7 911 aa11.79□□□□□ -0.52
AP004372.1-201ENST00000604842 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
AP004372.1-201ENST00000604842 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
AP004372.1-201ENST00000604842 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
AP004372.1-201ENST00000604842 SPOCK2Q92563 424 aa11.75□□□□□ -0.53
AP004372.1-201ENST00000604842 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
AP004372.1-201ENST00000604842 TAOK2Q9UL54 1235 aa11.73□□□□□ -0.53
AP004372.1-201ENST00000604842 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
AP004372.1-201ENST00000604842 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
AP004372.1-201ENST00000604842 RGL2O15211 777 aa11.69□□□□□ -0.54
AP004372.1-201ENST00000604842 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
AP004372.1-201ENST00000604842 ZBTB12Q9Y330 459 aaPredicted RBP11.68□□□□□ -0.54
AP004372.1-201ENST00000604842 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
AP004372.1-201ENST00000604842 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
AP004372.1-201ENST00000604842 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
AP004372.1-201ENST00000604842 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
AP004372.1-201ENST00000604842 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
AP004372.1-201ENST00000604842 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
AP004372.1-201ENST00000604842 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
AP004372.1-201ENST00000604842 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
AP004372.1-201ENST00000604842 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
AP004372.1-201ENST00000604842 DSG3P32926 999 aa11.53□□□□□ -0.56
AP004372.1-201ENST00000604842 MIER1Q8N108 512 aa11.53□□□□□ -0.56
AP004372.1-201ENST00000604842 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
AP004372.1-201ENST00000604842 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
AP004372.1-201ENST00000604842 CHGAP10645 457 aaKnown RBP11.48□□□□□ -0.57
AP004372.1-201ENST00000604842 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
AP004372.1-201ENST00000604842 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
AP004372.1-201ENST00000604842 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
AP004372.1-201ENST00000604842 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
AP004372.1-201ENST00000604842 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
AP004372.1-201ENST00000604842 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
AP004372.1-201ENST00000604842 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
AP004372.1-201ENST00000604842 NBR1Q14596 966 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms