RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
PTPN23-206ENST00000602307 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
PTPN23-206ENST00000602307 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
PTPN23-206ENST00000602307 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
PTPN23-206ENST00000602307 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
PTPN23-206ENST00000602307 FAM9AQ8IZU1 332 aaPredicted RBP19.11■□□□□ 0.65
PTPN23-206ENST00000602307 APLP2Q06481 763 aa18.99■□□□□ 0.63
PTPN23-206ENST00000602307 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
PTPN23-206ENST00000602307 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
PTPN23-206ENST00000602307 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
PTPN23-206ENST00000602307 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
PTPN23-206ENST00000602307 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
PTPN23-206ENST00000602307 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
PTPN23-206ENST00000602307 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
PTPN23-206ENST00000602307 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
PTPN23-206ENST00000602307 ZEB1P37275 1124 aaPredicted RBP18.33■□□□□ 0.52
PTPN23-206ENST00000602307 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
PTPN23-206ENST00000602307 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
PTPN23-206ENST00000602307 MYT1Q01538 1121 aa18.16■□□□□ 0.5
PTPN23-206ENST00000602307 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
PTPN23-206ENST00000602307 HRCP23327 699 aa18.09■□□□□ 0.49
PTPN23-206ENST00000602307 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
PTPN23-206ENST00000602307 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
PTPN23-206ENST00000602307 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
PTPN23-206ENST00000602307 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
PTPN23-206ENST00000602307 ITGAEP38570 1179 aa17.91■□□□□ 0.46
PTPN23-206ENST00000602307 NEFLP07196 543 aa17.9■□□□□ 0.46
PTPN23-206ENST00000602307 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
PTPN23-206ENST00000602307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.77■□□□□ 0.43
PTPN23-206ENST00000602307 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
PTPN23-206ENST00000602307 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
PTPN23-206ENST00000602307 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
PTPN23-206ENST00000602307 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
PTPN23-206ENST00000602307 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
PTPN23-206ENST00000602307 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
PTPN23-206ENST00000602307 ABCC9O60706 1549 aa17.41■□□□□ 0.38
PTPN23-206ENST00000602307 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
PTPN23-206ENST00000602307 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
PTPN23-206ENST00000602307 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
PTPN23-206ENST00000602307 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
PTPN23-206ENST00000602307 NEUROD1Q13562 356 aa17.27■□□□□ 0.36
PTPN23-206ENST00000602307 TRIM52Q96A61 297 aa17.26■□□□□ 0.35
PTPN23-206ENST00000602307 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
PTPN23-206ENST00000602307 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
PTPN23-206ENST00000602307 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
PTPN23-206ENST00000602307 FBLN2P98095 1184 aa17.09■□□□□ 0.33
PTPN23-206ENST00000602307 BCANQ96GW7 911 aa17.08■□□□□ 0.33
PTPN23-206ENST00000602307 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
PTPN23-206ENST00000602307 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
PTPN23-206ENST00000602307 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
PTPN23-206ENST00000602307 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
PTPN23-206ENST00000602307 ANP32CO43423 234 aa16.98■□□□□ 0.31
PTPN23-206ENST00000602307 ZNF316A6NFI3 1004 aaPredicted RBP16.96■□□□□ 0.31
PTPN23-206ENST00000602307 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
PTPN23-206ENST00000602307 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
PTPN23-206ENST00000602307 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.29
PTPN23-206ENST00000602307 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
PTPN23-206ENST00000602307 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
PTPN23-206ENST00000602307 BCL11AQ9H165 835 aa16.77■□□□□ 0.27
PTPN23-206ENST00000602307 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
PTPN23-206ENST00000602307 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
PTPN23-206ENST00000602307 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
PTPN23-206ENST00000602307 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
PTPN23-206ENST00000602307 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
PTPN23-206ENST00000602307 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
PTPN23-206ENST00000602307 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
PTPN23-206ENST00000602307 NACADO15069 1562 aa16.61■□□□□ 0.25
PTPN23-206ENST00000602307 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
PTPN23-206ENST00000602307 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
PTPN23-206ENST00000602307 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
PTPN23-206ENST00000602307 NEFMP07197 916 aa16.57■□□□□ 0.24
PTPN23-206ENST00000602307 FKBP8Q14318 412 aa16.56■□□□□ 0.24
PTPN23-206ENST00000602307 CHGAP10645 457 aaKnown RBP16.55■□□□□ 0.24
PTPN23-206ENST00000602307 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN23-206ENST00000602307 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
PTPN23-206ENST00000602307 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
PTPN23-206ENST00000602307 SALL2Q9Y467 1007 aaPredicted RBP16.52■□□□□ 0.23
PTPN23-206ENST00000602307 MIER1Q8N108 512 aa16.5■□□□□ 0.23
PTPN23-206ENST00000602307 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
PTPN23-206ENST00000602307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.237e-7■■□□□ 13.5
PTPN23-206ENST00000602307 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
PTPN23-206ENST00000602307 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
PTPN23-206ENST00000602307 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
PTPN23-206ENST00000602307 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
PTPN23-206ENST00000602307 CECR2Q9BXF3 1484 aa16.41■□□□□ 0.22
PTPN23-206ENST00000602307 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
PTPN23-206ENST00000602307 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
PTPN23-206ENST00000602307 NPM1P06748 294 aaKnown RBP eCLIP16.36■□□□□ 0.21
PTPN23-206ENST00000602307 MTUS2Q5JR59 1369 aa16.36■□□□□ 0.21
PTPN23-206ENST00000602307 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
PTPN23-206ENST00000602307 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
PTPN23-206ENST00000602307 CLIP1P30622 1438 aa16.35■□□□□ 0.21
PTPN23-206ENST00000602307 MRS2Q9HD23 443 aa16.33■□□□□ 0.21
PTPN23-206ENST00000602307 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
PTPN23-206ENST00000602307 BAZ1AQ9NRL2 1556 aaPredicted RBP16.32■□□□□ 0.2
PTPN23-206ENST00000602307 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
PTPN23-206ENST00000602307 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
PTPN23-206ENST00000602307 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
PTPN23-206ENST00000602307 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
PTPN23-206ENST00000602307 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms