RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 LARP4Q71RC2 724 aaKnown RBP eCLIP11.47□□□□□ -0.579e-10■■□□□ 14.3
PTPN23-206ENST00000602307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.62□□□□□ -0.552e-9■■□□□ 11.6
PTPN23-206ENST00000602307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.46□□□□□ -0.572e-9■□□□□ 10.1
PTPN23-206ENST00000602307 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.282e-9■■■■■ 29.1
PTPN23-206ENST00000602307 DDX6P26196 483 aaKnown RBP eCLIP11.79□□□□□ -0.527e-9■■■□□ 15.5
PTPN23-206ENST00000602307 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.132e-8■■■■■ 33.2
PTPN23-206ENST00000602307 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.472e-8■■□□□ 12.7
PTPN23-206ENST00000602307 DDX3XO00571 662 aaKnown RBP eCLIP12.5□□□□□ -0.412e-8■■■■□ 21.8
PTPN23-206ENST00000602307 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.212e-8■■■□□ 17.8
PTPN23-206ENST00000602307 RPS3P23396 243 aaKnown RBP eCLIP11.49□□□□□ -0.573e-8■■■■■ 30.4
PTPN23-206ENST00000602307 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.184e-8■□□□□ 9.7
PTPN23-206ENST00000602307 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.514e-8■■□□□ 12.7
PTPN23-206ENST00000602307 SF3B4Q15427 424 aaKnown RBP eCLIP11.11□□□□□ -0.636e-8■■■■□ 23.5
PTPN23-206ENST00000602307 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.371e-7■■□□□ 12.2
PTPN23-206ENST00000602307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.25□□□□□ -0.451e-7■■■□□ 18.3
PTPN23-206ENST00000602307 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■□□□□ 8.9
PTPN23-206ENST00000602307 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■□□ 17
PTPN23-206ENST00000602307 SF3B1O75533 1304 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■■■■■ 149.6
PTPN23-206ENST00000602307 HNRNPKP61978 463 aaKnown RBP eCLIP11.45□□□□□ -0.582e-7■■■■■ 28.2
PTPN23-206ENST00000602307 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■■■■ 27.5
PTPN23-206ENST00000602307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■□□□□ 9.2
PTPN23-206ENST00000602307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.04□□□□□ -0.323e-7■■■■□ 21.9
PTPN23-206ENST00000602307 FTOQ9C0B1 505 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■□□□□ 10.3
PTPN23-206ENST00000602307 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.86□□□□□ -0.514e-7■■■■■ 40.1
PTPN23-206ENST00000602307 PCBP2Q15366 365 aaKnown RBP eCLIP11.83□□□□□ -0.525e-7■■■■■ 31.7
PTPN23-206ENST00000602307 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.015e-7■■■■■ 29
PTPN23-206ENST00000602307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.72□□□□□ -0.215e-7■■■□□ 15
PTPN23-206ENST00000602307 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.436e-7■■■□□ 19
PTPN23-206ENST00000602307 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.076e-7■■■□□ 17.8
PTPN23-206ENST00000602307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.237e-7■■□□□ 13.5
PTPN23-206ENST00000602307 EFTUD2Q15029 972 aaKnown RBP eCLIP12.7□□□□□ -0.387e-7■■■■■ 36.5
PTPN23-206ENST00000602307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.278e-7■■■■■ 107.7
PTPN23-206ENST00000602307 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.688e-7■□□□□ 10
PTPN23-206ENST00000602307 NIPBLQ6KC79 2804 aaeCLIP7.18□□□□□ -1.269e-7■■■■□ 19.5
PTPN23-206ENST00000602307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■■■□ 25.1
PTPN23-206ENST00000602307 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.511e-6■■□□□ 13.7
PTPN23-206ENST00000602307 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■■□ 21.5
PTPN23-206ENST00000602307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.141e-6■■■■■ 82.6
PTPN23-206ENST00000602307 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■□□□ 12.1
PTPN23-206ENST00000602307 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.042e-6■■■□□ 14.6
PTPN23-206ENST00000602307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 11.5
PTPN23-206ENST00000602307 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.78□□□□□ -0.042e-6■■□□□ 12.5
PTPN23-206ENST00000602307 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.262e-6■□□□□ 8.7
PTPN23-206ENST00000602307 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■□□□□ 10.2
PTPN23-206ENST00000602307 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■■■□ 25.4
PTPN23-206ENST00000602307 SRSF1Q07955 248 aaKnown RBP eCLIP9.86□□□□□ -0.833e-6■■■■□ 22.2
PTPN23-206ENST00000602307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.054e-6■■□□□ 12.5
PTPN23-206ENST00000602307 IGF2BP3O00425 579 aaKnown RBP eCLIP12.56□□□□□ -0.49e-6■■■□□ 17.5
Retrieved 48 of 48 RNA–protein pairs in 28.7 ms