RNA–Protein interactions for RNA: ENST00000589533.5

ABCA8-211, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 2,106 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-211ENST00000589533 AEBP2Q6ZN18 517 aaPredicted RBP13.25□□□□□ -0.29
ABCA8-211ENST00000589533 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
ABCA8-211ENST00000589533 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
ABCA8-211ENST00000589533 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.52
ABCA8-211ENST00000589533 PHF23Q9BUL5 403 aaPredicted RBP11.3□□□□□ -0.6
ABCA8-211ENST00000589533 MSH5O43196 834 aa11.08□□□□□ -0.64
ABCA8-211ENST00000589533 FOXD1Q16676 465 aa11□□□□□ -0.65
ABCA8-211ENST00000589533 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
ABCA8-211ENST00000589533 POTEHQ6S545 545 aa10.09□□□□□ -0.79
ABCA8-211ENST00000589533 PIAS4Q8N2W9 510 aaPredicted RBP9.97□□□□□ -0.81
ABCA8-211ENST00000589533 PLPPR3Q6T4P5 718 aa9.95□□□□□ -0.82
ABCA8-211ENST00000589533 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
ABCA8-211ENST00000589533 ADRA2BP18089 450 aa9.44□□□□□ -0.9
ABCA8-211ENST00000589533 KCNA4P22459 653 aa9.43□□□□□ -0.9
ABCA8-211ENST00000589533 PPP6R1Q9UPN7 881 aa9.25□□□□□ -0.93
ABCA8-211ENST00000589533 NISCHQ9Y2I1 1504 aa9.21□□□□□ -0.94
ABCA8-211ENST00000589533 RNF39Q9H2S5 420 aa9.19□□□□□ -0.94
ABCA8-211ENST00000589533 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
ABCA8-211ENST00000589533 C1QBPQ07021 282 aaKnown RBP9.07□□□□□ -0.96
ABCA8-211ENST00000589533 DMRT2Q9Y5R5 561 aa9.05□□□□□ -0.96
ABCA8-211ENST00000589533 SLC4A1APQ9BWU0 796 aaKnown RBP9.04□□□□□ -0.96
ABCA8-211ENST00000589533 PLSCR2Q9NRY7 297 aa8.96□□□□□ -0.98
ABCA8-211ENST00000589533 ABCC9O60706 1549 aa8.91□□□□□ -0.98
ABCA8-211ENST00000589533 PPP4R3CPQ6ZMV5 832 aa8.89□□□□□ -0.99
ABCA8-211ENST00000589533 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
ABCA8-211ENST00000589533 NCBP3Q53F19 620 aaKnown RBP8.75□□□□□ -1.01
ABCA8-211ENST00000589533 DCAF8L1A6NGE4 600 aa8.73□□□□□ -1.01
ABCA8-211ENST00000589533 ZBTB22O15209 634 aa8.73□□□□□ -1.01
ABCA8-211ENST00000589533 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
ABCA8-211ENST00000589533 NPM3O75607 178 aaKnown RBP8.72□□□□□ -1.01
ABCA8-211ENST00000589533 SLC24A1O60721 1099 aa8.71□□□□□ -1.01
ABCA8-211ENST00000589533 CCDC180Q9P1Z9 1646 aa8.65□□□□□ -1.02
ABCA8-211ENST00000589533 MAPK8IP2Q13387 824 aaPredicted RBP8.65□□□□□ -1.03
ABCA8-211ENST00000589533 RTN4Q9NQC3 1192 aaKnown RBP8.61□□□□□ -1.03
ABCA8-211ENST00000589533 DNAJC5Q9H3Z4 198 aa8.5□□□□□ -1.05
ABCA8-211ENST00000589533 SCAF1Q9H7N4 1312 aaKnown RBP8.48□□□□□ -1.05
ABCA8-211ENST00000589533 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
ABCA8-211ENST00000589533 CNKSR2Q8WXI2 1034 aa8.45□□□□□ -1.06
ABCA8-211ENST00000589533 FOXD4L1Q9NU39 408 aa8.42□□□□□ -1.06
ABCA8-211ENST00000589533 RB1CC1Q8TDY2 1594 aa8.4□□□□□ -1.06
ABCA8-211ENST00000589533 UNC13AQ9UPW8 1703 aa8.26□□□□□ -1.09
ABCA8-211ENST00000589533 NACADO15069 1562 aa8.23□□□□□ -1.09
ABCA8-211ENST00000589533 FKBP8Q14318 412 aa8.22□□□□□ -1.09
ABCA8-211ENST00000589533 LHX8Q68G74 356 aa8.21□□□□□ -1.09
ABCA8-211ENST00000589533 CHRDL2Q6WN34 429 aa8.21□□□□□ -1.1
ABCA8-211ENST00000589533 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
ABCA8-211ENST00000589533 BICRAQ9NZM4 1560 aa8.13□□□□□ -1.11
ABCA8-211ENST00000589533 HOXD11P31277 338 aaPredicted RBP8.13□□□□□ -1.11
ABCA8-211ENST00000589533 CECR2Q9BXF3 1484 aa8.12□□□□□ -1.11
ABCA8-211ENST00000589533 CC2D2AQ9P2K1 1620 aa8.12□□□□□ -1.11
ABCA8-211ENST00000589533 SLC4A2P04920 1241 aa8.11□□□□□ -1.11
ABCA8-211ENST00000589533 PABPN1Q86U42 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
ABCA8-211ENST00000589533 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
ABCA8-211ENST00000589533 DSG3P32926 999 aa8.08□□□□□ -1.12
ABCA8-211ENST00000589533 CUX2O14529 1486 aa8.03□□□□□ -1.12
ABCA8-211ENST00000589533 ATXN8OSP0DMR3 200 aa8.01□□□□□ -1.13
ABCA8-211ENST00000589533 MYO15BQ96JP2 1530 aa7.98□□□□□ -1.13
ABCA8-211ENST00000589533 MYCNP04198 464 aaPredicted RBP7.98□□□□□ -1.13
ABCA8-211ENST00000589533 HAX1O00165 279 aa7.97□□□□□ -1.13
ABCA8-211ENST00000589533 EIF4G1Q04637 1599 aaKnown RBP7.97□□□□□ -1.13
ABCA8-211ENST00000589533 PCDH10Q9P2E7 1040 aa7.95□□□□□ -1.14
ABCA8-211ENST00000589533 RBM42Q9BTD8 480 aaKnown RBP7.92□□□□□ -1.14
ABCA8-211ENST00000589533 ATF5Q9Y2D1 282 aaPredicted RBP7.86□□□□□ -1.15
ABCA8-211ENST00000589533 PLCB2Q00722 1185 aa7.84□□□□□ -1.15
ABCA8-211ENST00000589533 CAPN15O75808 1086 aa7.81□□□□□ -1.16
ABCA8-211ENST00000589533 PRKCSHP14314 528 aaPredicted RBP7.81□□□□□ -1.16
ABCA8-211ENST00000589533 TRIM41Q8WV44 630 aa7.81□□□□□ -1.16
ABCA8-211ENST00000589533 POTEMA6NI47 508 aa7.79□□□□□ -1.16
ABCA8-211ENST00000589533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.77□□□□□ -1.17
ABCA8-211ENST00000589533 ERCC6Q03468 1493 aa7.77□□□□□ -1.17
ABCA8-211ENST00000589533 DCAF8L2P0C7V8 631 aa7.76□□□□□ -1.17
ABCA8-211ENST00000589533 HAP1P54257 671 aaPredicted RBP7.76□□□□□ -1.17
ABCA8-211ENST00000589533 POTEGQ6S5H5 508 aa7.7□□□□□ -1.18
ABCA8-211ENST00000589533 BCANQ96GW7 911 aa7.69□□□□□ -1.18
ABCA8-211ENST00000589533 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
ABCA8-211ENST00000589533 SCRIBQ14160 1630 aa7.67□□□□□ -1.18
ABCA8-211ENST00000589533 DCAF1Q9Y4B6 1507 aa7.67□□□□□ -1.18
ABCA8-211ENST00000589533 THOC2Q8NI27 1593 aaKnown RBP7.66□□□□□ -1.18
ABCA8-211ENST00000589533 PIP4P2Q8N4L2 257 aa7.66□□□□□ -1.18
ABCA8-211ENST00000589533 FBXO3Q9UK99 471 aa7.64□□□□□ -1.19
ABCA8-211ENST00000589533 SPINK5Q9NQ38 1064 aaPredicted RBP7.63□□□□□ -1.19
ABCA8-211ENST00000589533 SAMD1Q6SPF0 538 aaPredicted RBP7.61□□□□□ -1.19
ABCA8-211ENST00000589533 VASPP50552 380 aaPredicted RBP7.6□□□□□ -1.19
ABCA8-211ENST00000589533 SPDYE4A6NLX3 237 aa7.59□□□□□ -1.19
ABCA8-211ENST00000589533 EVX2Q03828 476 aa7.59□□□□□ -1.19
ABCA8-211ENST00000589533 IFNLR1Q8IU57 520 aaPredicted RBP7.59□□□□□ -1.19
ABCA8-211ENST00000589533 VSIG10Q8N0Z9 540 aa7.58□□□□□ -1.2
ABCA8-211ENST00000589533 TPRNQ4KMQ1 711 aa7.58□□□□□ -1.2
ABCA8-211ENST00000589533 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
ABCA8-211ENST00000589533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
ABCA8-211ENST00000589533 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
ABCA8-211ENST00000589533 PKD2Q13563 968 aa7.57□□□□□ -1.2
ABCA8-211ENST00000589533 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
ABCA8-211ENST00000589533 BAZ1AQ9NRL2 1556 aaPredicted RBP7.56□□□□□ -1.2
ABCA8-211ENST00000589533 KDM2AQ9Y2K7 1162 aa7.55□□□□□ -1.2
ABCA8-211ENST00000589533 NCAPD3P42695 1498 aa7.54□□□□□ -1.2
ABCA8-211ENST00000589533 ZCCHC6Q5VYS8 1495 aaKnown RBP7.53□□□□□ -1.2
ABCA8-211ENST00000589533 FBLN2P98095 1184 aa7.53□□□□□ -1.2
ABCA8-211ENST00000589533 KIF21AQ7Z4S6 1674 aa7.52□□□□□ -1.21
ABCA8-211ENST00000589533 LAMC3Q9Y6N6 1575 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms