RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CHIC1Q5VXU3 224 aa14.37□□□□□ -0.11
LINC01538-201ENST00000588074 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
LINC01538-201ENST00000588074 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
LINC01538-201ENST00000588074 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
LINC01538-201ENST00000588074 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.48
LINC01538-201ENST00000588074 KCNA4P22459 653 aa11.81□□□□□ -0.52
LINC01538-201ENST00000588074 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
LINC01538-201ENST00000588074 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
LINC01538-201ENST00000588074 ADRA2BP18089 450 aa11.53□□□□□ -0.56
LINC01538-201ENST00000588074 SENP3Q9H4L4 574 aaPredicted RBP11.39□□□□□ -0.59
LINC01538-201ENST00000588074 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
LINC01538-201ENST00000588074 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
LINC01538-201ENST00000588074 PPP6R1Q9UPN7 881 aa11.13□□□□□ -0.63
LINC01538-201ENST00000588074 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
LINC01538-201ENST00000588074 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
LINC01538-201ENST00000588074 ZBTB22O15209 634 aa10.97□□□□□ -0.65
LINC01538-201ENST00000588074 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
LINC01538-201ENST00000588074 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
LINC01538-201ENST00000588074 FOXD1Q16676 465 aa10.65□□□□□ -0.71
LINC01538-201ENST00000588074 NCBP3Q53F19 620 aaKnown RBP10.61□□□□□ -0.71
LINC01538-201ENST00000588074 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
LINC01538-201ENST00000588074 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
LINC01538-201ENST00000588074 FKBP8Q14318 412 aa10.4□□□□□ -0.74
LINC01538-201ENST00000588074 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
LINC01538-201ENST00000588074 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
LINC01538-201ENST00000588074 PIAS4Q8N2W9 510 aaPredicted RBP10.23□□□□□ -0.77
LINC01538-201ENST00000588074 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
LINC01538-201ENST00000588074 CNKSR2Q8WXI2 1034 aa10.19□□□□□ -0.78
LINC01538-201ENST00000588074 MYT1Q01538 1121 aa10.19□□□□□ -0.78
LINC01538-201ENST00000588074 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
LINC01538-201ENST00000588074 BCANQ96GW7 911 aa10.12□□□□□ -0.79
LINC01538-201ENST00000588074 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
LINC01538-201ENST00000588074 TIMELESSQ9UNS1 1208 aa10.01□□□□□ -0.81
LINC01538-201ENST00000588074 DNAJC5BQ9UF47 199 aa10.01□□□□□ -0.81
LINC01538-201ENST00000588074 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
LINC01538-201ENST00000588074 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
LINC01538-201ENST00000588074 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
LINC01538-201ENST00000588074 TULP1O00294 542 aaPredicted RBP9.88□□□□□ -0.83
LINC01538-201ENST00000588074 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
LINC01538-201ENST00000588074 MAPK8IP2Q13387 824 aaPredicted RBP9.86□□□□□ -0.83
LINC01538-201ENST00000588074 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
LINC01538-201ENST00000588074 DCAF8L2P0C7V8 631 aa9.83□□□□□ -0.84
LINC01538-201ENST00000588074 FBLN2P98095 1184 aa9.83□□□□□ -0.84
LINC01538-201ENST00000588074 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
LINC01538-201ENST00000588074 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
LINC01538-201ENST00000588074 ARXQ96QS3 562 aa9.76□□□□□ -0.85
LINC01538-201ENST00000588074 RNF216Q9NWF9 866 aaPredicted RBP9.76□□□□□ -0.85
LINC01538-201ENST00000588074 MYCNP04198 464 aaPredicted RBP9.73□□□□□ -0.85
LINC01538-201ENST00000588074 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
LINC01538-201ENST00000588074 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
LINC01538-201ENST00000588074 PKD2Q13563 968 aa9.64□□□□□ -0.87
LINC01538-201ENST00000588074 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
LINC01538-201ENST00000588074 NPM1P06748 294 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC01538-201ENST00000588074 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
LINC01538-201ENST00000588074 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
LINC01538-201ENST00000588074 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
LINC01538-201ENST00000588074 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
LINC01538-201ENST00000588074 TSHZ2Q9NRE2 1034 aa9.52□□□□□ -0.89
LINC01538-201ENST00000588074 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
LINC01538-201ENST00000588074 HOXD11P31277 338 aaPredicted RBP9.49□□□□□ -0.89
LINC01538-201ENST00000588074 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
LINC01538-201ENST00000588074 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
LINC01538-201ENST00000588074 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
LINC01538-201ENST00000588074 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
LINC01538-201ENST00000588074 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
LINC01538-201ENST00000588074 C14orf37Q86TY3 774 aa9.37□□□□□ -0.91
LINC01538-201ENST00000588074 NBR1Q14596 966 aa9.36□□□□□ -0.91
LINC01538-201ENST00000588074 PROM2Q8N271 834 aa9.35□□□□□ -0.91
LINC01538-201ENST00000588074 APLP2Q06481 763 aa9.34□□□□□ -0.91
LINC01538-201ENST00000588074 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
LINC01538-201ENST00000588074 ECM2O94769 699 aaPredicted RBP9.3□□□□□ -0.92
LINC01538-201ENST00000588074 DMRT2Q9Y5R5 561 aa9.3□□□□□ -0.92
LINC01538-201ENST00000588074 RGL2O15211 777 aa9.3□□□□□ -0.92
LINC01538-201ENST00000588074 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
LINC01538-201ENST00000588074 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
LINC01538-201ENST00000588074 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
LINC01538-201ENST00000588074 MKRN4PQ13434 485 aaPredicted RBP9.25□□□□□ -0.93
LINC01538-201ENST00000588074 MSH5O43196 834 aa9.2□□□□□ -0.94
LINC01538-201ENST00000588074 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
LINC01538-201ENST00000588074 CHGAP10645 457 aaKnown RBP9.15□□□□□ -0.94
LINC01538-201ENST00000588074 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
LINC01538-201ENST00000588074 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
LINC01538-201ENST00000588074 SPOCK2Q92563 424 aa9.13□□□□□ -0.95
LINC01538-201ENST00000588074 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
LINC01538-201ENST00000588074 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
LINC01538-201ENST00000588074 UBTFP17480 764 aaKnown RBP9.1□□□□□ -0.95
LINC01538-201ENST00000588074 HRCP23327 699 aa9.1□□□□□ -0.95
LINC01538-201ENST00000588074 TRIM26Q12899 539 aaPredicted RBP9.07□□□□□ -0.96
LINC01538-201ENST00000588074 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
LINC01538-201ENST00000588074 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
LINC01538-201ENST00000588074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC01538-201ENST00000588074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.04□□□□□ -0.96
LINC01538-201ENST00000588074 HNRNPUL2Q1KMD3 747 aaKnown RBP9.04□□□□□ -0.96
LINC01538-201ENST00000588074 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
LINC01538-201ENST00000588074 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
LINC01538-201ENST00000588074 NKX1-1Q15270 411 aaPredicted RBP8.97□□□□□ -0.97
LINC01538-201ENST00000588074 DCAF8L1A6NGE4 600 aa8.93□□□□□ -0.98
LINC01538-201ENST00000588074 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
LINC01538-201ENST00000588074 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
LINC01538-201ENST00000588074 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 249.5 ms