RNA–Protein interactions for RNA: ENST00000583960.1

SS18L2P2-201, Transcript of SS18 like 2 pseudogene 2, humanhuman

BASIC

Gene SS18L2P2, Length 235 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2P2-201ENST00000583960 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
SS18L2P2-201ENST00000583960 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
SS18L2P2-201ENST00000583960 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.09
SS18L2P2-201ENST00000583960 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
SS18L2P2-201ENST00000583960 SENP3Q9H4L4 574 aaPredicted RBP13.38□□□□□ -0.27
SS18L2P2-201ENST00000583960 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
SS18L2P2-201ENST00000583960 KCNA4P22459 653 aa12.81□□□□□ -0.36
SS18L2P2-201ENST00000583960 ADRA2BP18089 450 aa12.79□□□□□ -0.36
SS18L2P2-201ENST00000583960 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
SS18L2P2-201ENST00000583960 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
SS18L2P2-201ENST00000583960 FOXD1Q16676 465 aa12.35□□□□□ -0.43
SS18L2P2-201ENST00000583960 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
SS18L2P2-201ENST00000583960 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
SS18L2P2-201ENST00000583960 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
SS18L2P2-201ENST00000583960 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
SS18L2P2-201ENST00000583960 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
SS18L2P2-201ENST00000583960 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
SS18L2P2-201ENST00000583960 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
SS18L2P2-201ENST00000583960 ZBTB22O15209 634 aa11.79□□□□□ -0.52
SS18L2P2-201ENST00000583960 ABCC9O60706 1549 aa11.7□□□□□ -0.54
SS18L2P2-201ENST00000583960 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
SS18L2P2-201ENST00000583960 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
SS18L2P2-201ENST00000583960 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
SS18L2P2-201ENST00000583960 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
SS18L2P2-201ENST00000583960 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
SS18L2P2-201ENST00000583960 NISCHQ9Y2I1 1504 aa11.46□□□□□ -0.57
SS18L2P2-201ENST00000583960 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
SS18L2P2-201ENST00000583960 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
SS18L2P2-201ENST00000583960 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
SS18L2P2-201ENST00000583960 FKBP8Q14318 412 aa11.17□□□□□ -0.62
SS18L2P2-201ENST00000583960 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
SS18L2P2-201ENST00000583960 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
SS18L2P2-201ENST00000583960 MSH5O43196 834 aa11.02□□□□□ -0.65
SS18L2P2-201ENST00000583960 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
SS18L2P2-201ENST00000583960 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
SS18L2P2-201ENST00000583960 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
SS18L2P2-201ENST00000583960 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
SS18L2P2-201ENST00000583960 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
SS18L2P2-201ENST00000583960 PLCB2Q00722 1185 aa10.69□□□□□ -0.7
SS18L2P2-201ENST00000583960 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
SS18L2P2-201ENST00000583960 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
SS18L2P2-201ENST00000583960 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
SS18L2P2-201ENST00000583960 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
SS18L2P2-201ENST00000583960 FBXO3Q9UK99 471 aa10.54□□□□□ -0.72
SS18L2P2-201ENST00000583960 BCANQ96GW7 911 aa10.52□□□□□ -0.73
SS18L2P2-201ENST00000583960 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
SS18L2P2-201ENST00000583960 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
SS18L2P2-201ENST00000583960 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
SS18L2P2-201ENST00000583960 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
SS18L2P2-201ENST00000583960 TAOK2Q9UL54 1235 aa10.43□□□□□ -0.74
SS18L2P2-201ENST00000583960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
SS18L2P2-201ENST00000583960 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
SS18L2P2-201ENST00000583960 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
SS18L2P2-201ENST00000583960 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
SS18L2P2-201ENST00000583960 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
SS18L2P2-201ENST00000583960 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
SS18L2P2-201ENST00000583960 DCAF8L1A6NGE4 600 aa10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 PROM2Q8N271 834 aa10.31□□□□□ -0.76
SS18L2P2-201ENST00000583960 CUX2O14529 1486 aa10.3□□□□□ -0.76
SS18L2P2-201ENST00000583960 PKD2Q13563 968 aa10.28□□□□□ -0.76
SS18L2P2-201ENST00000583960 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
SS18L2P2-201ENST00000583960 BICRAQ9NZM4 1560 aa10.25□□□□□ -0.77
SS18L2P2-201ENST00000583960 NACADO15069 1562 aa10.23□□□□□ -0.77
SS18L2P2-201ENST00000583960 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
SS18L2P2-201ENST00000583960 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
SS18L2P2-201ENST00000583960 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
SS18L2P2-201ENST00000583960 APLP2Q06481 763 aa10.16□□□□□ -0.78
SS18L2P2-201ENST00000583960 FBLN2P98095 1184 aa10.15□□□□□ -0.78
SS18L2P2-201ENST00000583960 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
SS18L2P2-201ENST00000583960 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
SS18L2P2-201ENST00000583960 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
SS18L2P2-201ENST00000583960 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
SS18L2P2-201ENST00000583960 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
SS18L2P2-201ENST00000583960 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
SS18L2P2-201ENST00000583960 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
SS18L2P2-201ENST00000583960 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
SS18L2P2-201ENST00000583960 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
SS18L2P2-201ENST00000583960 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
SS18L2P2-201ENST00000583960 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
SS18L2P2-201ENST00000583960 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
SS18L2P2-201ENST00000583960 RGL2O15211 777 aa9.94□□□□□ -0.82
SS18L2P2-201ENST00000583960 POLA2Q14181 598 aa9.93□□□□□ -0.82
SS18L2P2-201ENST00000583960 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
SS18L2P2-201ENST00000583960 NBR1Q14596 966 aa9.88□□□□□ -0.83
SS18L2P2-201ENST00000583960 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
SS18L2P2-201ENST00000583960 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
SS18L2P2-201ENST00000583960 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
SS18L2P2-201ENST00000583960 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
SS18L2P2-201ENST00000583960 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
SS18L2P2-201ENST00000583960 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
SS18L2P2-201ENST00000583960 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
SS18L2P2-201ENST00000583960 SPINK5Q9NQ38 1064 aaPredicted RBP9.81□□□□□ -0.84
SS18L2P2-201ENST00000583960 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
SS18L2P2-201ENST00000583960 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms