RNA–Protein interactions for RNA: ENST00000569275.1

LINC00890-202, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LINC00890, Length 4,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00890-202ENST00000569275 CHIC1Q5VXU3 224 aa10.28□□□□□ -0.76
LINC00890-202ENST00000569275 AEBP2Q6ZN18 517 aaPredicted RBP10.19□□□□□ -0.78
LINC00890-202ENST00000569275 PHF23Q9BUL5 403 aaPredicted RBP9.14□□□□□ -0.95
LINC00890-202ENST00000569275 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
LINC00890-202ENST00000569275 PLPPR3Q6T4P5 718 aa8.49□□□□□ -1.05
LINC00890-202ENST00000569275 ADRA2BP18089 450 aa8.01□□□□□ -1.13
LINC00890-202ENST00000569275 PPP6R1Q9UPN7 881 aa7.93□□□□□ -1.14
LINC00890-202ENST00000569275 FOXD1Q16676 465 aa7.89□□□□□ -1.15
LINC00890-202ENST00000569275 KCNA4P22459 653 aa7.85□□□□□ -1.15
LINC00890-202ENST00000569275 EHMT2Q96KQ7 1210 aa7.76□□□□□ -1.17
LINC00890-202ENST00000569275 PPP4R3CPQ6ZMV5 832 aa7.55□□□□□ -1.2
LINC00890-202ENST00000569275 CSRNP3Q8WYN3 585 aa7.53□□□□□ -1.2
LINC00890-202ENST00000569275 SLC4A1APQ9BWU0 796 aaKnown RBP7.5□□□□□ -1.21
LINC00890-202ENST00000569275 PIAS4Q8N2W9 510 aaPredicted RBP7.5□□□□□ -1.21
LINC00890-202ENST00000569275 NCBP3Q53F19 620 aaKnown RBP7.4□□□□□ -1.22
LINC00890-202ENST00000569275 NPM3O75607 178 aaKnown RBP7.38□□□□□ -1.23
LINC00890-202ENST00000569275 ZBTB22O15209 634 aa7.28□□□□□ -1.24
LINC00890-202ENST00000569275 CNKSR2Q8WXI2 1034 aa7.23□□□□□ -1.25
LINC00890-202ENST00000569275 SCAF1Q9H7N4 1312 aaKnown RBP7.15□□□□□ -1.26
LINC00890-202ENST00000569275 DNAJC5BQ9UF47 199 aa7.12□□□□□ -1.27
LINC00890-202ENST00000569275 MAPK8IP2Q13387 824 aaPredicted RBP7.08□□□□□ -1.28
LINC00890-202ENST00000569275 FOXD4L1Q9NU39 408 aa7.07□□□□□ -1.28
LINC00890-202ENST00000569275 MSH5O43196 834 aa7.05□□□□□ -1.28
LINC00890-202ENST00000569275 RNF216Q9NWF9 866 aaPredicted RBP7.01□□□□□ -1.29
LINC00890-202ENST00000569275 SLC4A2P04920 1241 aa6.9□□□□□ -1.3
LINC00890-202ENST00000569275 HOXD11P31277 338 aaPredicted RBP6.89□□□□□ -1.31
LINC00890-202ENST00000569275 DMRT2Q9Y5R5 561 aa6.87□□□□□ -1.31
LINC00890-202ENST00000569275 RTN4Q9NQC3 1192 aaKnown RBP6.86□□□□□ -1.31
LINC00890-202ENST00000569275 AMER1Q5JTC6 1135 aaPredicted RBP6.8□□□□□ -1.32
LINC00890-202ENST00000569275 SLC24A1O60721 1099 aa6.8□□□□□ -1.32
LINC00890-202ENST00000569275 ATXN8OSP0DMR3 200 aa6.78□□□□□ -1.32
LINC00890-202ENST00000569275 MYCNP04198 464 aaPredicted RBP6.77□□□□□ -1.33
LINC00890-202ENST00000569275 FKBP8Q14318 412 aa6.73□□□□□ -1.33
LINC00890-202ENST00000569275 ATF5Q9Y2D1 282 aaPredicted RBP6.64□□□□□ -1.35
LINC00890-202ENST00000569275 U3KPZ7 1027 aaPredicted RBP6.52□□□□□ -1.37
LINC00890-202ENST00000569275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.51□□□□□ -1.37
LINC00890-202ENST00000569275 DCAF8L1A6NGE4 600 aa6.49□□□□□ -1.37
LINC00890-202ENST00000569275 SAMD1Q6SPF0 538 aaPredicted RBP6.49□□□□□ -1.37
LINC00890-202ENST00000569275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.48□□□□□ -1.37
LINC00890-202ENST00000569275 HNRNPUL2Q1KMD3 747 aaKnown RBP6.48□□□□□ -1.37
LINC00890-202ENST00000569275 ZNF219Q9P2Y4 722 aaPredicted RBP6.42□□□□□ -1.38
LINC00890-202ENST00000569275 MKRN4PQ13434 485 aaPredicted RBP6.36□□□□□ -1.39
LINC00890-202ENST00000569275 PROM2Q8N271 834 aa6.35□□□□□ -1.39
LINC00890-202ENST00000569275 SPDYE4A6NLX3 237 aa6.35□□□□□ -1.39
LINC00890-202ENST00000569275 FBXO3Q9UK99 471 aa6.34□□□□□ -1.39
LINC00890-202ENST00000569275 PLCB2Q00722 1185 aa6.3□□□□□ -1.4
LINC00890-202ENST00000569275 VASPP50552 380 aaPredicted RBP6.29□□□□□ -1.4
LINC00890-202ENST00000569275 APLP2Q06481 763 aa6.28□□□□□ -1.4
LINC00890-202ENST00000569275 IFNLR1Q8IU57 520 aaPredicted RBP6.27□□□□□ -1.41
LINC00890-202ENST00000569275 SPINK5Q9NQ38 1064 aaPredicted RBP6.22□□□□□ -1.41
LINC00890-202ENST00000569275 PKD2Q13563 968 aa6.22□□□□□ -1.41
LINC00890-202ENST00000569275 FBLN2P98095 1184 aa6.21□□□□□ -1.42
LINC00890-202ENST00000569275 POLA2Q14181 598 aa6.2□□□□□ -1.42
LINC00890-202ENST00000569275 TRHP20396 242 aaPredicted RBP6.19□□□□□ -1.42
LINC00890-202ENST00000569275 HAP1P54257 671 aaPredicted RBP6.17□□□□□ -1.42
LINC00890-202ENST00000569275 DCAF8L2P0C7V8 631 aa6.15□□□□□ -1.43
LINC00890-202ENST00000569275 RNF39Q9H2S5 420 aa6.13□□□□□ -1.43
LINC00890-202ENST00000569275 CAPN15O75808 1086 aa6.11□□□□□ -1.43
LINC00890-202ENST00000569275 VSIG10Q8N0Z9 540 aa6.1□□□□□ -1.43
LINC00890-202ENST00000569275 BCANQ96GW7 911 aa6.09□□□□□ -1.43
LINC00890-202ENST00000569275 NPM1P06748 294 aaKnown RBP eCLIP6.09□□□□□ -1.44
LINC00890-202ENST00000569275 PRKCSHP14314 528 aaPredicted RBP6.08□□□□□ -1.44
LINC00890-202ENST00000569275 SPOCK2Q92563 424 aa6.07□□□□□ -1.44
LINC00890-202ENST00000569275 KDM2AQ9Y2K7 1162 aa6.07□□□□□ -1.44
LINC00890-202ENST00000569275 ABCB7O75027 752 aa6.06□□□□□ -1.44
LINC00890-202ENST00000569275 ZBTB12Q9Y330 459 aaPredicted RBP6.06□□□□□ -1.44
LINC00890-202ENST00000569275 BBXQ8WY36 941 aaPredicted RBP6.06□□□□□ -1.44
LINC00890-202ENST00000569275 TAOK2Q9UL54 1235 aa6.05□□□□□ -1.44
LINC00890-202ENST00000569275 ECM2O94769 699 aaPredicted RBP6.04□□□□□ -1.44
LINC00890-202ENST00000569275 C1QBPQ07021 282 aaKnown RBP6.04□□□□□ -1.44
LINC00890-202ENST00000569275 KLHL34Q8N239 644 aa6.03□□□□□ -1.44
LINC00890-202ENST00000569275 RGL2O15211 777 aa6.03□□□□□ -1.44
LINC00890-202ENST00000569275 PAXIP1Q6ZW49 1069 aaPredicted RBP6.01□□□□□ -1.45
LINC00890-202ENST00000569275 ZNF692Q9BU19 519 aaPredicted RBP6.01□□□□□ -1.45
LINC00890-202ENST00000569275 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.01□□□□□ -1.45
LINC00890-202ENST00000569275 STAG3Q9UJ98 1225 aa6.01□□□□□ -1.45
LINC00890-202ENST00000569275 SSUH2Q9Y2M2 353 aa6.01□□□□□ -1.45
LINC00890-202ENST00000569275 CFAP44Q96MT7 982 aa5.99□□□□□ -1.45
LINC00890-202ENST00000569275 OSCARQ8IYS5 282 aa5.98□□□□□ -1.45
LINC00890-202ENST00000569275 DSG3P32926 999 aa5.98□□□□□ -1.45
LINC00890-202ENST00000569275 SPDYE2BA6NHP3 402 aa5.97□□□□□ -1.45
LINC00890-202ENST00000569275 SPDYE6P0CI01 402 aa5.97□□□□□ -1.45
LINC00890-202ENST00000569275 SPDYE2Q495Y8 402 aa5.97□□□□□ -1.45
LINC00890-202ENST00000569275 PLCD3Q8N3E9 789 aa5.97□□□□□ -1.45
LINC00890-202ENST00000569275 PABPN1Q86U42 306 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC00890-202ENST00000569275 TSHZ2Q9NRE2 1034 aa5.95□□□□□ -1.46
LINC00890-202ENST00000569275 MIER1Q8N108 512 aa5.95□□□□□ -1.46
LINC00890-202ENST00000569275 TPRNQ4KMQ1 711 aa5.94□□□□□ -1.46
LINC00890-202ENST00000569275 SPRYD3Q8NCJ5 442 aa5.94□□□□□ -1.46
LINC00890-202ENST00000569275 NISCHQ9Y2I1 1504 aa5.93□□□□□ -1.46
LINC00890-202ENST00000569275 CHGAP10645 457 aaKnown RBP5.91□□□□□ -1.46
LINC00890-202ENST00000569275 DNAJC5Q9H3Z4 198 aa5.9□□□□□ -1.46
LINC00890-202ENST00000569275 CIZ1Q9ULV3 898 aaPredicted RBP5.89□□□□□ -1.47
LINC00890-202ENST00000569275 RNF25Q96BH1 459 aaPredicted RBP5.87□□□□□ -1.47
LINC00890-202ENST00000569275 HS6ST3Q8IZP7 471 aa5.87□□□□□ -1.47
LINC00890-202ENST00000569275 ZBTB47Q9UFB7 747 aaPredicted RBP5.86□□□□□ -1.47
LINC00890-202ENST00000569275 TRIM41Q8WV44 630 aa5.84□□□□□ -1.47
LINC00890-202ENST00000569275 NKX1-1Q15270 411 aaPredicted RBP5.83□□□□□ -1.48
LINC00890-202ENST00000569275 PLEKHG5O94827 1062 aa5.82□□□□□ -1.48
LINC00890-202ENST00000569275 NUBP1P53384 320 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms