RNA–Protein interactions for RNA: ENST00000566349.5

KLHDC4-215, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 1,377 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-215ENST00000566349 ZNF622Q969S3 477 aaKnown RBP eCLIP21.75■■□□□ 1.073e-13■□□□□ 9.8
KLHDC4-215ENST00000566349 AQRO60306 1485 aaKnown RBP eCLIP29.31■■■□□ 2.283e-9■■□□□ 14.2
KLHDC4-215ENST00000566349 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.06■□□□□ 0.645e-9■■■□□ 18.9
KLHDC4-215ENST00000566349 SF3A3Q12874 501 aaKnown RBP eCLIP16.35■□□□□ 0.212e-8■■■□□ 14.8
KLHDC4-215ENST00000566349 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.26□□□□□ -0.133e-8■■■□□ 17.7
KLHDC4-215ENST00000566349 PPIGQ13427 754 aaKnown RBP eCLIP19.12■□□□□ 0.653e-8■■■□□ 19
KLHDC4-215ENST00000566349 EIF4G2P78344 907 aaKnown RBP eCLIP24.51■■□□□ 1.514e-8■■■■■ 65.3
KLHDC4-215ENST00000566349 AATFQ9NY61 560 aaKnown RBP eCLIP20.97■□□□□ 0.952e-7■■■■■ 44.2
KLHDC4-215ENST00000566349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.21■□□□□ 0.352e-7■■■■■ 64.2
KLHDC4-215ENST00000566349 ZRANB2O95218 330 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■■■■ 37.1
KLHDC4-215ENST00000566349 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.272e-7■■■■□ 20.1
KLHDC4-215ENST00000566349 TAF15Q92804 592 aaKnown RBP eCLIP13.83□□□□□ -0.22e-7■■■□□ 15
KLHDC4-215ENST00000566349 TARDBPQ13148 414 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■■■■ 40.5
KLHDC4-215ENST00000566349 DDX6P26196 483 aaKnown RBP eCLIP18.21■□□□□ 0.514e-7■■■■■ 56.6
KLHDC4-215ENST00000566349 SF3B4Q15427 424 aaKnown RBP eCLIP15.58■□□□□ 0.084e-7■■■■□ 21.9
KLHDC4-215ENST00000566349 NONOQ15233 471 aaKnown RBP eCLIP19.84■□□□□ 0.774e-7■■■□□ 16.6
KLHDC4-215ENST00000566349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.21■□□□□ 0.516e-7■■■■□ 26.4
KLHDC4-215ENST00000566349 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.38■□□□□ 0.377e-7■■■■□ 22.8
KLHDC4-215ENST00000566349 EFTUD2Q15029 972 aaKnown RBP eCLIP17.13■□□□□ 0.337e-7■■■■■ 30.5
KLHDC4-215ENST00000566349 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.07■□□□□ 0.489e-7■■■■■ 55
KLHDC4-215ENST00000566349 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■■■■□ 19.3
KLHDC4-215ENST00000566349 HNRNPMP52272 730 aaKnown RBP eCLIP26.68■■□□□ 1.861e-6■■■■□ 19.4
KLHDC4-215ENST00000566349 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■□ 25.6
KLHDC4-215ENST00000566349 U2AF2P26368 475 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■■■■ 28.8
KLHDC4-215ENST00000566349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.69■□□□□ 0.581e-6■■■■■ 116.5
KLHDC4-215ENST00000566349 FUSP35637 526 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■■■□□ 15.7
KLHDC4-215ENST00000566349 GTF2F1P35269 517 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■■□ 24
KLHDC4-215ENST00000566349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■■□□ 15.7
KLHDC4-215ENST00000566349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.49■□□□□ 0.552e-6■■□□□ 12
KLHDC4-215ENST00000566349 KHSRPQ92945 711 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■■■□ 20
KLHDC4-215ENST00000566349 SF3B1O75533 1304 aaKnown RBP eCLIP18.7■□□□□ 0.582e-6■■■■■ 92.8
KLHDC4-215ENST00000566349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■■□□ 16.2
KLHDC4-215ENST00000566349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■□□□□ 9.5
KLHDC4-215ENST00000566349 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.192e-6■■■■□ 22.7
KLHDC4-215ENST00000566349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.07■□□□□ 0.483e-6■■■□□ 17.1
KLHDC4-215ENST00000566349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.03■□□□□ 0.83e-6■■■■■ 30.5
KLHDC4-215ENST00000566349 DKC1O60832 514 aaKnown RBP eCLIP19.46■□□□□ 0.713e-6■■■■□ 24.5
KLHDC4-215ENST00000566349 PCBP2Q15366 365 aaKnown RBP eCLIP16.74■□□□□ 0.273e-6■■■■□ 25.7
KLHDC4-215ENST00000566349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.13■■□□□ 1.934e-6■■■■□ 21.7
KLHDC4-215ENST00000566349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.754e-6■■□□□ 11.5
KLHDC4-215ENST00000566349 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.06■□□□□ 0.964e-6■■■■■ 34.4
KLHDC4-215ENST00000566349 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.316e-6■□□□□ 8.6
KLHDC4-215ENST00000566349 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.687e-6■■■■□ 20
KLHDC4-215ENST00000566349 LSM11P83369 360 aaKnown RBP eCLIP15.59■□□□□ 0.097e-6■■■■□ 21.1
KLHDC4-215ENST00000566349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.3□□□□□ -0.129e-6■□□□□ 9.4
KLHDC4-215ENST00000566349 SMNDC1O75940 238 aaKnown RBP eCLIP15.4■□□□□ 0.069e-6■■■■□ 24.8
KLHDC4-215ENST00000566349 LARP4Q71RC2 724 aaKnown RBP eCLIP16.4■□□□□ 0.229e-6■■■■■ 29.6
KLHDC4-215ENST00000566349 SRSF1Q07955 248 aaKnown RBP eCLIP15.4■□□□□ 0.069e-6■□□□□ 8.7
Retrieved 48 of 48 RNA–protein pairs in 12 ms