RNA–Protein interactions for RNA: ENST00000563724.1

LINC02516-201, Transcript of long intergenic non-protein coding RNA 2516, humanhuman

TSL 2 BASIC

Gene LINC02516, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02516-201ENST00000563724 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
LINC02516-201ENST00000563724 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
LINC02516-201ENST00000563724 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
LINC02516-201ENST00000563724 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
LINC02516-201ENST00000563724 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
LINC02516-201ENST00000563724 FOXD1Q16676 465 aa12.89□□□□□ -0.35
LINC02516-201ENST00000563724 ADRA2BP18089 450 aa12.45□□□□□ -0.42
LINC02516-201ENST00000563724 PPP6R1Q9UPN7 881 aa12.44□□□□□ -0.42
LINC02516-201ENST00000563724 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
LINC02516-201ENST00000563724 MSH5O43196 834 aa11.87□□□□□ -0.51
LINC02516-201ENST00000563724 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
LINC02516-201ENST00000563724 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
LINC02516-201ENST00000563724 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
LINC02516-201ENST00000563724 KCNA4P22459 653 aa11.36□□□□□ -0.59
LINC02516-201ENST00000563724 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
LINC02516-201ENST00000563724 NCBP3Q53F19 620 aaKnown RBP11.26□□□□□ -0.61
LINC02516-201ENST00000563724 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
LINC02516-201ENST00000563724 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
LINC02516-201ENST00000563724 NPM3O75607 178 aaKnown RBP11.1□□□□□ -0.63
LINC02516-201ENST00000563724 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
LINC02516-201ENST00000563724 EHMT2Q96KQ7 1210 aa10.96□□□□□ -0.65
LINC02516-201ENST00000563724 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
LINC02516-201ENST00000563724 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
LINC02516-201ENST00000563724 DNAJC5BQ9UF47 199 aa10.73□□□□□ -0.69
LINC02516-201ENST00000563724 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
LINC02516-201ENST00000563724 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.74
LINC02516-201ENST00000563724 ZBTB22O15209 634 aa10.45□□□□□ -0.74
LINC02516-201ENST00000563724 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
LINC02516-201ENST00000563724 FOXD4L1Q9NU39 408 aa10.44□□□□□ -0.74
LINC02516-201ENST00000563724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC02516-201ENST00000563724 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
LINC02516-201ENST00000563724 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
LINC02516-201ENST00000563724 RNF39Q9H2S5 420 aa10.17□□□□□ -0.78
LINC02516-201ENST00000563724 SLC24A1O60721 1099 aa10.16□□□□□ -0.78
LINC02516-201ENST00000563724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
LINC02516-201ENST00000563724 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
LINC02516-201ENST00000563724 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
LINC02516-201ENST00000563724 C1QBPQ07021 282 aaKnown RBP10.06□□□□□ -0.8
LINC02516-201ENST00000563724 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
LINC02516-201ENST00000563724 APLP2Q06481 763 aa10.02□□□□□ -0.81
LINC02516-201ENST00000563724 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.81
LINC02516-201ENST00000563724 SPINK5Q9NQ38 1064 aaPredicted RBP9.93□□□□□ -0.82
LINC02516-201ENST00000563724 CAPN15O75808 1086 aa9.91□□□□□ -0.82
LINC02516-201ENST00000563724 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
LINC02516-201ENST00000563724 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.82
LINC02516-201ENST00000563724 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
LINC02516-201ENST00000563724 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
LINC02516-201ENST00000563724 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
LINC02516-201ENST00000563724 POLA2Q14181 598 aa9.73□□□□□ -0.85
LINC02516-201ENST00000563724 ABCB7O75027 752 aa9.72□□□□□ -0.85
LINC02516-201ENST00000563724 DSG3P32926 999 aa9.7□□□□□ -0.86
LINC02516-201ENST00000563724 ZBTB12Q9Y330 459 aaPredicted RBP9.58□□□□□ -0.88
LINC02516-201ENST00000563724 FBLN2P98095 1184 aa9.57□□□□□ -0.88
LINC02516-201ENST00000563724 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
LINC02516-201ENST00000563724 FKBP8Q14318 412 aa9.46□□□□□ -0.9
LINC02516-201ENST00000563724 OSCARQ8IYS5 282 aa9.4□□□□□ -0.9
LINC02516-201ENST00000563724 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
LINC02516-201ENST00000563724 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
LINC02516-201ENST00000563724 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
LINC02516-201ENST00000563724 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
LINC02516-201ENST00000563724 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
LINC02516-201ENST00000563724 RBM42Q9BTD8 480 aaKnown RBP9.26□□□□□ -0.93
LINC02516-201ENST00000563724 SSUH2Q9Y2M2 353 aa9.24□□□□□ -0.93
LINC02516-201ENST00000563724 PROM2Q8N271 834 aa9.2□□□□□ -0.94
LINC02516-201ENST00000563724 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC02516-201ENST00000563724 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
LINC02516-201ENST00000563724 FBXO3Q9UK99 471 aa9.11□□□□□ -0.95
LINC02516-201ENST00000563724 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
LINC02516-201ENST00000563724 REM2Q8IYK8 340 aaPredicted RBP9.06□□□□□ -0.96
LINC02516-201ENST00000563724 SPDYE1Q8NFV5 336 aaPredicted RBP9.02□□□□□ -0.97
LINC02516-201ENST00000563724 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
LINC02516-201ENST00000563724 BCANQ96GW7 911 aa9□□□□□ -0.97
LINC02516-201ENST00000563724 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
LINC02516-201ENST00000563724 HAP1P54257 671 aaPredicted RBP8.99□□□□□ -0.97
LINC02516-201ENST00000563724 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
LINC02516-201ENST00000563724 PITPNM1O00562 1244 aa8.96□□□□□ -0.97
LINC02516-201ENST00000563724 PRKCSHP14314 528 aaPredicted RBP8.95□□□□□ -0.98
LINC02516-201ENST00000563724 PRR29P0C7W0 189 aa8.91□□□□□ -0.98
LINC02516-201ENST00000563724 TAOK2Q9UL54 1235 aa8.91□□□□□ -0.98
LINC02516-201ENST00000563724 PLCD3Q8N3E9 789 aa8.89□□□□□ -0.99
LINC02516-201ENST00000563724 MIER1Q8N108 512 aa8.88□□□□□ -0.99
LINC02516-201ENST00000563724 PLEKHG5O94827 1062 aa8.86□□□□□ -0.99
LINC02516-201ENST00000563724 DCAF8L2P0C7V8 631 aa8.86□□□□□ -0.99
LINC02516-201ENST00000563724 POTEHQ6S545 545 aa8.86□□□□□ -0.99
LINC02516-201ENST00000563724 VSIG10Q8N0Z9 540 aa8.86□□□□□ -0.99
LINC02516-201ENST00000563724 CHRDL2Q6WN34 429 aa8.85□□□□□ -0.99
LINC02516-201ENST00000563724 IFNLR1Q8IU57 520 aaPredicted RBP8.85□□□□□ -0.99
LINC02516-201ENST00000563724 KLHL34Q8N239 644 aa8.81□□□□□ -1
LINC02516-201ENST00000563724 CREBZFQ9NS37 354 aa8.79□□□□□ -1
LINC02516-201ENST00000563724 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
LINC02516-201ENST00000563724 TPRNQ4KMQ1 711 aa8.76□□□□□ -1.01
LINC02516-201ENST00000563724 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC02516-201ENST00000563724 CHADLQ6NUI6 762 aa8.75□□□□□ -1.01
LINC02516-201ENST00000563724 PRKAR2AP13861 404 aaKnown RBP8.74□□□□□ -1.01
LINC02516-201ENST00000563724 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
LINC02516-201ENST00000563724 SPOCK2Q92563 424 aa8.73□□□□□ -1.01
LINC02516-201ENST00000563724 MNX1P50219 401 aaPredicted RBP8.71□□□□□ -1.01
LINC02516-201ENST00000563724 FARP1Q9Y4F1 1045 aaPredicted RBP8.68□□□□□ -1.02
LINC02516-201ENST00000563724 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
LINC02516-201ENST00000563724 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms