RNA–Protein interactions for RNA: ENST00000559681.1

CNOT6LP1-201, Transcript of CCR4-NOT transcription complex subunit 6-like pseudogene 1, humanhuman

BASIC

Gene CNOT6LP1, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6LP1-201ENST00000559681 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
CNOT6LP1-201ENST00000559681 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
CNOT6LP1-201ENST00000559681 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
CNOT6LP1-201ENST00000559681 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
CNOT6LP1-201ENST00000559681 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
CNOT6LP1-201ENST00000559681 ADRA2BP18089 450 aa15.99■□□□□ 0.15
CNOT6LP1-201ENST00000559681 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
CNOT6LP1-201ENST00000559681 KCNA4P22459 653 aa15.74■□□□□ 0.11
CNOT6LP1-201ENST00000559681 EHMT2Q96KQ7 1210 aa15.66■□□□□ 0.1
CNOT6LP1-201ENST00000559681 FOXD1Q16676 465 aa15.63■□□□□ 0.09
CNOT6LP1-201ENST00000559681 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
CNOT6LP1-201ENST00000559681 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
CNOT6LP1-201ENST00000559681 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
CNOT6LP1-201ENST00000559681 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CNOT6LP1-201ENST00000559681 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
CNOT6LP1-201ENST00000559681 NPM3O75607 178 aaKnown RBP14.74□□□□□ -0.05
CNOT6LP1-201ENST00000559681 ZBTB22O15209 634 aa14.56□□□□□ -0.08
CNOT6LP1-201ENST00000559681 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
CNOT6LP1-201ENST00000559681 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
CNOT6LP1-201ENST00000559681 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
CNOT6LP1-201ENST00000559681 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
CNOT6LP1-201ENST00000559681 MAPK8IP2Q13387 824 aaPredicted RBP14.11□□□□□ -0.15
CNOT6LP1-201ENST00000559681 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
CNOT6LP1-201ENST00000559681 MSH5O43196 834 aa13.93□□□□□ -0.18
CNOT6LP1-201ENST00000559681 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
CNOT6LP1-201ENST00000559681 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
CNOT6LP1-201ENST00000559681 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
CNOT6LP1-201ENST00000559681 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
CNOT6LP1-201ENST00000559681 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
CNOT6LP1-201ENST00000559681 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
CNOT6LP1-201ENST00000559681 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
CNOT6LP1-201ENST00000559681 FKBP8Q14318 412 aa13.56□□□□□ -0.24
CNOT6LP1-201ENST00000559681 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
CNOT6LP1-201ENST00000559681 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
CNOT6LP1-201ENST00000559681 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
CNOT6LP1-201ENST00000559681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
CNOT6LP1-201ENST00000559681 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.34
CNOT6LP1-201ENST00000559681 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
CNOT6LP1-201ENST00000559681 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
CNOT6LP1-201ENST00000559681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
CNOT6LP1-201ENST00000559681 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
CNOT6LP1-201ENST00000559681 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
CNOT6LP1-201ENST00000559681 PLCB2Q00722 1185 aa12.74□□□□□ -0.37
CNOT6LP1-201ENST00000559681 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
CNOT6LP1-201ENST00000559681 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
CNOT6LP1-201ENST00000559681 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
CNOT6LP1-201ENST00000559681 PROM2Q8N271 834 aa12.66□□□□□ -0.38
CNOT6LP1-201ENST00000559681 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
CNOT6LP1-201ENST00000559681 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
CNOT6LP1-201ENST00000559681 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
CNOT6LP1-201ENST00000559681 APLP2Q06481 763 aa12.51□□□□□ -0.41
CNOT6LP1-201ENST00000559681 PKD2Q13563 968 aa12.51□□□□□ -0.41
CNOT6LP1-201ENST00000559681 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
CNOT6LP1-201ENST00000559681 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
CNOT6LP1-201ENST00000559681 FBLN2P98095 1184 aa12.42□□□□□ -0.42
CNOT6LP1-201ENST00000559681 BCANQ96GW7 911 aa12.38□□□□□ -0.43
CNOT6LP1-201ENST00000559681 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
CNOT6LP1-201ENST00000559681 POLA2Q14181 598 aa12.37□□□□□ -0.43
CNOT6LP1-201ENST00000559681 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
CNOT6LP1-201ENST00000559681 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
CNOT6LP1-201ENST00000559681 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
CNOT6LP1-201ENST00000559681 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
CNOT6LP1-201ENST00000559681 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.44
CNOT6LP1-201ENST00000559681 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
CNOT6LP1-201ENST00000559681 SPOCK2Q92563 424 aa12.2□□□□□ -0.46
CNOT6LP1-201ENST00000559681 CAPN15O75808 1086 aa12.19□□□□□ -0.46
CNOT6LP1-201ENST00000559681 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
CNOT6LP1-201ENST00000559681 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
CNOT6LP1-201ENST00000559681 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
CNOT6LP1-201ENST00000559681 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.17□□□□□ -0.46
CNOT6LP1-201ENST00000559681 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
CNOT6LP1-201ENST00000559681 RGL2O15211 777 aa12.12□□□□□ -0.47
CNOT6LP1-201ENST00000559681 TPRNQ4KMQ1 711 aa12.12□□□□□ -0.47
CNOT6LP1-201ENST00000559681 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
CNOT6LP1-201ENST00000559681 ABCB7O75027 752 aa12.09□□□□□ -0.47
CNOT6LP1-201ENST00000559681 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
CNOT6LP1-201ENST00000559681 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
CNOT6LP1-201ENST00000559681 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.48
CNOT6LP1-201ENST00000559681 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
CNOT6LP1-201ENST00000559681 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
CNOT6LP1-201ENST00000559681 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
CNOT6LP1-201ENST00000559681 MIER1Q8N108 512 aa11.95□□□□□ -0.5
CNOT6LP1-201ENST00000559681 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
CNOT6LP1-201ENST00000559681 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
CNOT6LP1-201ENST00000559681 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
CNOT6LP1-201ENST00000559681 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
CNOT6LP1-201ENST00000559681 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
CNOT6LP1-201ENST00000559681 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
CNOT6LP1-201ENST00000559681 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
CNOT6LP1-201ENST00000559681 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
CNOT6LP1-201ENST00000559681 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
CNOT6LP1-201ENST00000559681 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
CNOT6LP1-201ENST00000559681 DSG3P32926 999 aa11.83□□□□□ -0.52
CNOT6LP1-201ENST00000559681 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
CNOT6LP1-201ENST00000559681 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
CNOT6LP1-201ENST00000559681 NBR1Q14596 966 aa11.73□□□□□ -0.53
CNOT6LP1-201ENST00000559681 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
CNOT6LP1-201ENST00000559681 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
CNOT6LP1-201ENST00000559681 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
CNOT6LP1-201ENST00000559681 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms