RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SHISA9-203ENST00000558583 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
SHISA9-203ENST00000558583 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
SHISA9-203ENST00000558583 SHROOM4Q9ULL8 1493 aa25.23■■□□□ 1.63
SHISA9-203ENST00000558583 PELP1Q8IZL8 1130 aaKnown RBP25.09■■□□□ 1.61
SHISA9-203ENST00000558583 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
SHISA9-203ENST00000558583 RANGAP1P46060 587 aaPredicted RBP24.83■■□□□ 1.57
SHISA9-203ENST00000558583 FAM9AQ8IZU1 332 aaPredicted RBP24.83■■□□□ 1.56
SHISA9-203ENST00000558583 APLP2Q06481 763 aa24.77■■□□□ 1.56
SHISA9-203ENST00000558583 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
SHISA9-203ENST00000558583 ERICH6Q7L0X2 663 aa24.65■■□□□ 1.54
SHISA9-203ENST00000558583 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
SHISA9-203ENST00000558583 MYT1Q01538 1121 aa24.24■■□□□ 1.47
SHISA9-203ENST00000558583 YTHDC1Q96MU7 727 aaKnown RBP24.22■■□□□ 1.47
SHISA9-203ENST00000558583 MYT1LQ9UL68 1186 aa24.16■■□□□ 1.46
SHISA9-203ENST00000558583 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
SHISA9-203ENST00000558583 CENPBP07199 599 aaPredicted RBP24.05■■□□□ 1.44
SHISA9-203ENST00000558583 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
SHISA9-203ENST00000558583 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
SHISA9-203ENST00000558583 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
SHISA9-203ENST00000558583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
SHISA9-203ENST00000558583 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
SHISA9-203ENST00000558583 NEFLP07196 543 aa23.68■■□□□ 1.38
SHISA9-203ENST00000558583 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
SHISA9-203ENST00000558583 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
SHISA9-203ENST00000558583 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.35
SHISA9-203ENST00000558583 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
SHISA9-203ENST00000558583 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
SHISA9-203ENST00000558583 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
SHISA9-203ENST00000558583 ITGAEP38570 1179 aa23.32■■□□□ 1.32
SHISA9-203ENST00000558583 DAXXQ9UER7 740 aaPredicted RBP23.29■■□□□ 1.32
SHISA9-203ENST00000558583 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
SHISA9-203ENST00000558583 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
SHISA9-203ENST00000558583 HRCP23327 699 aa22.9■■□□□ 1.26
SHISA9-203ENST00000558583 BCANQ96GW7 911 aa22.83■■□□□ 1.25
SHISA9-203ENST00000558583 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
SHISA9-203ENST00000558583 BCL11AQ9H165 835 aa22.77■■□□□ 1.24
SHISA9-203ENST00000558583 FBLN2P98095 1184 aa22.75■■□□□ 1.23
SHISA9-203ENST00000558583 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
SHISA9-203ENST00000558583 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
SHISA9-203ENST00000558583 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
SHISA9-203ENST00000558583 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
SHISA9-203ENST00000558583 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
SHISA9-203ENST00000558583 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
SHISA9-203ENST00000558583 FAM50AQ14320 339 aaKnown RBP22.47■■□□□ 1.19
SHISA9-203ENST00000558583 DIEXFQ68CQ4 756 aaKnown RBP22.46■■□□□ 1.19
SHISA9-203ENST00000558583 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
SHISA9-203ENST00000558583 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
SHISA9-203ENST00000558583 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
SHISA9-203ENST00000558583 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
SHISA9-203ENST00000558583 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
SHISA9-203ENST00000558583 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
SHISA9-203ENST00000558583 A0A0G2JS52 829 aa22.2■■□□□ 1.14
SHISA9-203ENST00000558583 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
SHISA9-203ENST00000558583 EIF5BO60841 1220 aaKnown RBP22.16■■□□□ 1.14
SHISA9-203ENST00000558583 PLEKHG5O94827 1062 aa22.14■■□□□ 1.13
SHISA9-203ENST00000558583 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
SHISA9-203ENST00000558583 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
SHISA9-203ENST00000558583 ABCC9O60706 1549 aa22.1■■□□□ 1.13
SHISA9-203ENST00000558583 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
SHISA9-203ENST00000558583 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
SHISA9-203ENST00000558583 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
SHISA9-203ENST00000558583 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.12
SHISA9-203ENST00000558583 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
SHISA9-203ENST00000558583 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
SHISA9-203ENST00000558583 NEFMP07197 916 aa21.96■■□□□ 1.11
SHISA9-203ENST00000558583 ANP32CO43423 234 aa21.9■■□□□ 1.1
SHISA9-203ENST00000558583 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
SHISA9-203ENST00000558583 ARXQ96QS3 562 aa21.89■■□□□ 1.1
SHISA9-203ENST00000558583 NBR1Q14596 966 aa21.77■■□□□ 1.08
SHISA9-203ENST00000558583 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
SHISA9-203ENST00000558583 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
SHISA9-203ENST00000558583 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SHISA9-203ENST00000558583 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
SHISA9-203ENST00000558583 ACIN1Q9UKV3 1341 aaKnown RBP21.65■■□□□ 1.06
SHISA9-203ENST00000558583 C14orf37Q86TY3 774 aa21.65■■□□□ 1.06
SHISA9-203ENST00000558583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
SHISA9-203ENST00000558583 HSP90AA1P07900 732 aaKnown RBP21.58■■□□□ 1.04
SHISA9-203ENST00000558583 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
SHISA9-203ENST00000558583 TULP1O00294 542 aaPredicted RBP21.51■■□□□ 1.03
SHISA9-203ENST00000558583 ANP32BQ92688 251 aaKnown RBP21.51■■□□□ 1.03
SHISA9-203ENST00000558583 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
SHISA9-203ENST00000558583 IRX6P78412 446 aaPredicted RBP21.45■■□□□ 1.03
SHISA9-203ENST00000558583 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
SHISA9-203ENST00000558583 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHISA9-203ENST00000558583 GLIPR1L2Q4G1C9 344 aa21.33■■□□□ 1
SHISA9-203ENST00000558583 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
SHISA9-203ENST00000558583 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
SHISA9-203ENST00000558583 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
SHISA9-203ENST00000558583 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
SHISA9-203ENST00000558583 DDX10Q13206 875 aaKnown RBP21.27■■□□□ 1
SHISA9-203ENST00000558583 NPHP1O15259 732 aa21.26■□□□□ 0.99
SHISA9-203ENST00000558583 KCNH8Q96L42 1107 aa21.25■□□□□ 0.99
SHISA9-203ENST00000558583 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
SHISA9-203ENST00000558583 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
SHISA9-203ENST00000558583 UPF2Q9HAU5 1272 aaKnown RBP21.23■□□□□ 0.99
SHISA9-203ENST00000558583 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
SHISA9-203ENST00000558583 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
SHISA9-203ENST00000558583 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
SHISA9-203ENST00000558583 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 2092.9 ms