RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
AC012409.1-202ENST00000558449 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
AC012409.1-202ENST00000558449 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
AC012409.1-202ENST00000558449 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
AC012409.1-202ENST00000558449 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
AC012409.1-202ENST00000558449 FOXD1Q16676 465 aa20.38■□□□□ 0.85
AC012409.1-202ENST00000558449 ADRA2BP18089 450 aa20.23■□□□□ 0.83
AC012409.1-202ENST00000558449 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
AC012409.1-202ENST00000558449 KCNA4P22459 653 aa19.48■□□□□ 0.71
AC012409.1-202ENST00000558449 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
AC012409.1-202ENST00000558449 PPP4R3CPQ6ZMV5 832 aa19.13■□□□□ 0.65
AC012409.1-202ENST00000558449 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
AC012409.1-202ENST00000558449 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
AC012409.1-202ENST00000558449 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
AC012409.1-202ENST00000558449 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
AC012409.1-202ENST00000558449 MSH5O43196 834 aa18.48■□□□□ 0.55
AC012409.1-202ENST00000558449 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
AC012409.1-202ENST00000558449 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
AC012409.1-202ENST00000558449 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
AC012409.1-202ENST00000558449 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
AC012409.1-202ENST00000558449 ZBTB22O15209 634 aa17.94■□□□□ 0.46
AC012409.1-202ENST00000558449 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
AC012409.1-202ENST00000558449 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
AC012409.1-202ENST00000558449 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
AC012409.1-202ENST00000558449 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
AC012409.1-202ENST00000558449 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
AC012409.1-202ENST00000558449 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
AC012409.1-202ENST00000558449 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
AC012409.1-202ENST00000558449 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
AC012409.1-202ENST00000558449 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
AC012409.1-202ENST00000558449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
AC012409.1-202ENST00000558449 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
AC012409.1-202ENST00000558449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
AC012409.1-202ENST00000558449 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
AC012409.1-202ENST00000558449 FKBP8Q14318 412 aa16.6■□□□□ 0.25
AC012409.1-202ENST00000558449 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
AC012409.1-202ENST00000558449 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
AC012409.1-202ENST00000558449 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
AC012409.1-202ENST00000558449 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
AC012409.1-202ENST00000558449 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
AC012409.1-202ENST00000558449 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
AC012409.1-202ENST00000558449 APLP2Q06481 763 aa16.25■□□□□ 0.19
AC012409.1-202ENST00000558449 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
AC012409.1-202ENST00000558449 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
AC012409.1-202ENST00000558449 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
AC012409.1-202ENST00000558449 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
AC012409.1-202ENST00000558449 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
AC012409.1-202ENST00000558449 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
AC012409.1-202ENST00000558449 POLA2Q14181 598 aa15.85■□□□□ 0.13
AC012409.1-202ENST00000558449 CAPN15O75808 1086 aa15.84■□□□□ 0.13
AC012409.1-202ENST00000558449 FBLN2P98095 1184 aa15.84■□□□□ 0.13
AC012409.1-202ENST00000558449 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
AC012409.1-202ENST00000558449 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
AC012409.1-202ENST00000558449 PROM2Q8N271 834 aa15.73■□□□□ 0.11
AC012409.1-202ENST00000558449 ABCB7O75027 752 aa15.61■□□□□ 0.09
AC012409.1-202ENST00000558449 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
AC012409.1-202ENST00000558449 VASPP50552 380 aaPredicted RBP15.56■□□□□ 0.08
AC012409.1-202ENST00000558449 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
AC012409.1-202ENST00000558449 DSG3P32926 999 aa15.41■□□□□ 0.06
AC012409.1-202ENST00000558449 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
AC012409.1-202ENST00000558449 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
AC012409.1-202ENST00000558449 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
AC012409.1-202ENST00000558449 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
AC012409.1-202ENST00000558449 OSCARQ8IYS5 282 aa15.25■□□□□ 0.03
AC012409.1-202ENST00000558449 SSUH2Q9Y2M2 353 aa15.21■□□□□ 0.03
AC012409.1-202ENST00000558449 PKD2Q13563 968 aa15.18■□□□□ 0.02
AC012409.1-202ENST00000558449 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
AC012409.1-202ENST00000558449 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
AC012409.1-202ENST00000558449 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC012409.1-202ENST00000558449 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
AC012409.1-202ENST00000558449 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
AC012409.1-202ENST00000558449 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
AC012409.1-202ENST00000558449 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
AC012409.1-202ENST00000558449 MIER1Q8N108 512 aa15.03■□□□□ -0
AC012409.1-202ENST00000558449 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
AC012409.1-202ENST00000558449 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
AC012409.1-202ENST00000558449 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
AC012409.1-202ENST00000558449 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
AC012409.1-202ENST00000558449 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
AC012409.1-202ENST00000558449 RGL2O15211 777 aa14.8□□□□□ -0.04
AC012409.1-202ENST00000558449 BBXQ8WY36 941 aaPredicted RBP14.8□□□□□ -0.04
AC012409.1-202ENST00000558449 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
AC012409.1-202ENST00000558449 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
AC012409.1-202ENST00000558449 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.05
AC012409.1-202ENST00000558449 VSIG10Q8N0Z9 540 aa14.69□□□□□ -0.06
AC012409.1-202ENST00000558449 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
AC012409.1-202ENST00000558449 CFAP44Q96MT7 982 aa14.65□□□□□ -0.06
AC012409.1-202ENST00000558449 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
AC012409.1-202ENST00000558449 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
AC012409.1-202ENST00000558449 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
AC012409.1-202ENST00000558449 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
AC012409.1-202ENST00000558449 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
AC012409.1-202ENST00000558449 GSE1Q14687 1217 aa14.57□□□□□ -0.08
AC012409.1-202ENST00000558449 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
AC012409.1-202ENST00000558449 NUBP1P53384 320 aa14.56□□□□□ -0.08
AC012409.1-202ENST00000558449 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
AC012409.1-202ENST00000558449 PRR29P0C7W0 189 aa14.53□□□□□ -0.08
AC012409.1-202ENST00000558449 BCANQ96GW7 911 aa14.52□□□□□ -0.09
AC012409.1-202ENST00000558449 KDM2AQ9Y2K7 1162 aa14.52□□□□□ -0.09
AC012409.1-202ENST00000558449 DCAF8Q5TAQ9 597 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms