RNA–Protein interactions for RNA: ENST00000553939.5

LTBP2-202, Transcript of latent transforming growth factor beta binding protein 2, humanhuman

TSL 5

Gene LTBP2, Length 6,462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP2-202ENST00000553939 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
LTBP2-202ENST00000553939 EHMT2Q96KQ7 1210 aa27.32■■□□□ 1.96
LTBP2-202ENST00000553939 PELP1Q8IZL8 1130 aaKnown RBP27.2■■□□□ 1.94
LTBP2-202ENST00000553939 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
LTBP2-202ENST00000553939 ERICH6Q7L0X2 663 aa26.55■■□□□ 1.84
LTBP2-202ENST00000553939 APLP2Q06481 763 aa26.42■■□□□ 1.82
LTBP2-202ENST00000553939 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
LTBP2-202ENST00000553939 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
LTBP2-202ENST00000553939 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
LTBP2-202ENST00000553939 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
LTBP2-202ENST00000553939 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
LTBP2-202ENST00000553939 ATP1B4Q9UN42 357 aaPredicted RBP25.84■■□□□ 1.73
LTBP2-202ENST00000553939 MYT1Q01538 1121 aa25.78■■□□□ 1.72
LTBP2-202ENST00000553939 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
LTBP2-202ENST00000553939 CENPBP07199 599 aaPredicted RBP25.54■■□□□ 1.68
LTBP2-202ENST00000553939 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
LTBP2-202ENST00000553939 NEFLP07196 543 aa25.44■■□□□ 1.66
LTBP2-202ENST00000553939 DAXXQ9UER7 740 aaPredicted RBP25.23■■□□□ 1.63
LTBP2-202ENST00000553939 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
LTBP2-202ENST00000553939 POLR3GLQ9BT43 218 aa25.12■■□□□ 1.61
LTBP2-202ENST00000553939 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
LTBP2-202ENST00000553939 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
LTBP2-202ENST00000553939 UBTFP17480 764 aaKnown RBP24.92■■□□□ 1.58
LTBP2-202ENST00000553939 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
LTBP2-202ENST00000553939 ZEB1P37275 1124 aaPredicted RBP24.83■■□□□ 1.56
LTBP2-202ENST00000553939 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
LTBP2-202ENST00000553939 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
LTBP2-202ENST00000553939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.55
LTBP2-202ENST00000553939 HNRNPUL2Q1KMD3 747 aaKnown RBP24.7■■□□□ 1.55
LTBP2-202ENST00000553939 ITGAEP38570 1179 aa24.63■■□□□ 1.53
LTBP2-202ENST00000553939 ZNF316A6NFI3 1004 aaPredicted RBP24.59■■□□□ 1.53
LTBP2-202ENST00000553939 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
LTBP2-202ENST00000553939 RTL5Q5HYW3 569 aaPredicted RBP24.35■■□□□ 1.49
LTBP2-202ENST00000553939 BCL11AQ9H165 835 aa24.3■■□□□ 1.48
LTBP2-202ENST00000553939 SLC24A1O60721 1099 aa24.24■■□□□ 1.47
LTBP2-202ENST00000553939 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
LTBP2-202ENST00000553939 ZBTB47Q9UFB7 747 aaPredicted RBP24.03■■□□□ 1.44
LTBP2-202ENST00000553939 BCANQ96GW7 911 aa23.84■■□□□ 1.41
LTBP2-202ENST00000553939 TRIM52Q96A61 297 aa23.76■■□□□ 1.39
LTBP2-202ENST00000553939 HRCP23327 699 aa23.76■■□□□ 1.39
LTBP2-202ENST00000553939 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
LTBP2-202ENST00000553939 CANXP27824 592 aaKnown RBP23.75■■□□□ 1.39
LTBP2-202ENST00000553939 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
LTBP2-202ENST00000553939 FAM50AQ14320 339 aaKnown RBP23.69■■□□□ 1.38
LTBP2-202ENST00000553939 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
LTBP2-202ENST00000553939 NEFMP07197 916 aa23.49■■□□□ 1.35
LTBP2-202ENST00000553939 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
LTBP2-202ENST00000553939 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
LTBP2-202ENST00000553939 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
LTBP2-202ENST00000553939 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
LTBP2-202ENST00000553939 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.34
LTBP2-202ENST00000553939 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
LTBP2-202ENST00000553939 ANP32CO43423 234 aa23.32■■□□□ 1.32
LTBP2-202ENST00000553939 FBLN2P98095 1184 aa23.29■■□□□ 1.32
LTBP2-202ENST00000553939 ANP32BQ92688 251 aaKnown RBP23.27■■□□□ 1.32
LTBP2-202ENST00000553939 HSP90AA1P07900 732 aaKnown RBP23.26■■□□□ 1.31
LTBP2-202ENST00000553939 ANP32AP39687 249 aaKnown RBP23.18■■□□□ 1.3
LTBP2-202ENST00000553939 A0A0G2JS52 829 aa23.17■■□□□ 1.3
LTBP2-202ENST00000553939 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
LTBP2-202ENST00000553939 ARXQ96QS3 562 aa23.14■■□□□ 1.29
LTBP2-202ENST00000553939 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
LTBP2-202ENST00000553939 CDK11BP21127 795 aaKnown RBP23.12■■□□□ 1.29
LTBP2-202ENST00000553939 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
LTBP2-202ENST00000553939 ESF1Q9H501 851 aaKnown RBP23.07■■□□□ 1.28
LTBP2-202ENST00000553939 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
LTBP2-202ENST00000553939 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
LTBP2-202ENST00000553939 TULP1O00294 542 aaPredicted RBP23■■□□□ 1.27
LTBP2-202ENST00000553939 PLEKHG5O94827 1062 aa22.97■■□□□ 1.27
LTBP2-202ENST00000553939 ZNF777Q9ULD5 760 aaPredicted RBP22.95■■□□□ 1.27
LTBP2-202ENST00000553939 SALL2Q9Y467 1007 aaPredicted RBP22.9■■□□□ 1.26
LTBP2-202ENST00000553939 UPF2Q9HAU5 1272 aaKnown RBP22.89■■□□□ 1.26
LTBP2-202ENST00000553939 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
LTBP2-202ENST00000553939 GLIPR1L2Q4G1C9 344 aa22.83■■□□□ 1.24
LTBP2-202ENST00000553939 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
LTBP2-202ENST00000553939 NBR1Q14596 966 aa22.79■■□□□ 1.24
LTBP2-202ENST00000553939 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
LTBP2-202ENST00000553939 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
LTBP2-202ENST00000553939 TPRNQ4KMQ1 711 aa22.68■■□□□ 1.22
LTBP2-202ENST00000553939 FKBP8Q14318 412 aa22.66■■□□□ 1.22
LTBP2-202ENST00000553939 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
LTBP2-202ENST00000553939 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
LTBP2-202ENST00000553939 C14orf37Q86TY3 774 aa22.63■■□□□ 1.21
LTBP2-202ENST00000553939 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
LTBP2-202ENST00000553939 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
LTBP2-202ENST00000553939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.52■■□□□ 1.2
LTBP2-202ENST00000553939 HNRNPUQ00839 825 aaKnown RBP eCLIP22.52■■□□□ 1.2
LTBP2-202ENST00000553939 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
LTBP2-202ENST00000553939 WDR43Q15061 677 aaKnown RBP eCLIP22.47■■□□□ 1.19
LTBP2-202ENST00000553939 NCLP19338 710 aaKnown RBP22.46■■□□□ 1.19
LTBP2-202ENST00000553939 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
LTBP2-202ENST00000553939 HAP1P54257 671 aaPredicted RBP22.44■■□□□ 1.18
LTBP2-202ENST00000553939 NPM1P06748 294 aaKnown RBP eCLIP22.4■■□□□ 1.18
LTBP2-202ENST00000553939 ZRSR1Q15695 479 aaKnown RBP22.39■■□□□ 1.18
LTBP2-202ENST00000553939 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
LTBP2-202ENST00000553939 TRIM44Q96DX7 344 aaPredicted RBP22.36■■□□□ 1.17
LTBP2-202ENST00000553939 NPHP1O15259 732 aa22.35■■□□□ 1.17
LTBP2-202ENST00000553939 IRX6P78412 446 aaPredicted RBP22.35■■□□□ 1.17
LTBP2-202ENST00000553939 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
LTBP2-202ENST00000553939 PTMAP06454 111 aaKnown RBP22.34■■□□□ 1.17
LTBP2-202ENST00000553939 CLSTN1O94985 981 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms