RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
TGFBR1-208ENST00000550253 AEBP2Q6ZN18 517 aaPredicted RBP21.65■■□□□ 1.06
TGFBR1-208ENST00000550253 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
TGFBR1-208ENST00000550253 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
TGFBR1-208ENST00000550253 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
TGFBR1-208ENST00000550253 ADRA2BP18089 450 aa17.11■□□□□ 0.33
TGFBR1-208ENST00000550253 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
TGFBR1-208ENST00000550253 KCNA4P22459 653 aa16.87■□□□□ 0.29
TGFBR1-208ENST00000550253 FOXD1Q16676 465 aa16.79■□□□□ 0.28
TGFBR1-208ENST00000550253 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
TGFBR1-208ENST00000550253 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
TGFBR1-208ENST00000550253 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
TGFBR1-208ENST00000550253 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
TGFBR1-208ENST00000550253 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
TGFBR1-208ENST00000550253 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
TGFBR1-208ENST00000550253 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
TGFBR1-208ENST00000550253 ZBTB22O15209 634 aa15.58■□□□□ 0.08
TGFBR1-208ENST00000550253 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
TGFBR1-208ENST00000550253 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
TGFBR1-208ENST00000550253 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
TGFBR1-208ENST00000550253 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
TGFBR1-208ENST00000550253 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0.01
TGFBR1-208ENST00000550253 MSH5O43196 834 aa15.06■□□□□ 0
TGFBR1-208ENST00000550253 RNF216Q9NWF9 866 aaPredicted RBP15.02□□□□□ -0.01
TGFBR1-208ENST00000550253 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
TGFBR1-208ENST00000550253 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
TGFBR1-208ENST00000550253 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
TGFBR1-208ENST00000550253 SLC4A2P04920 1241 aa14.74□□□□□ -0.05
TGFBR1-208ENST00000550253 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
TGFBR1-208ENST00000550253 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
TGFBR1-208ENST00000550253 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
TGFBR1-208ENST00000550253 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
TGFBR1-208ENST00000550253 FKBP8Q14318 412 aa14.55□□□□□ -0.08
TGFBR1-208ENST00000550253 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
TGFBR1-208ENST00000550253 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
TGFBR1-208ENST00000550253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
TGFBR1-208ENST00000550253 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
TGFBR1-208ENST00000550253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.17
TGFBR1-208ENST00000550253 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
TGFBR1-208ENST00000550253 U3KPZ7 1027 aaPredicted RBP13.9□□□□□ -0.18
TGFBR1-208ENST00000550253 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
TGFBR1-208ENST00000550253 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
TGFBR1-208ENST00000550253 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
TGFBR1-208ENST00000550253 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
TGFBR1-208ENST00000550253 PROM2Q8N271 834 aa13.64□□□□□ -0.23
TGFBR1-208ENST00000550253 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
TGFBR1-208ENST00000550253 APLP2Q06481 763 aa13.58□□□□□ -0.24
TGFBR1-208ENST00000550253 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
TGFBR1-208ENST00000550253 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
TGFBR1-208ENST00000550253 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
TGFBR1-208ENST00000550253 FBLN2P98095 1184 aa13.4□□□□□ -0.26
TGFBR1-208ENST00000550253 PKD2Q13563 968 aa13.4□□□□□ -0.26
TGFBR1-208ENST00000550253 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
TGFBR1-208ENST00000550253 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
TGFBR1-208ENST00000550253 BCANQ96GW7 911 aa13.32□□□□□ -0.28
TGFBR1-208ENST00000550253 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
TGFBR1-208ENST00000550253 POLA2Q14181 598 aa13.29□□□□□ -0.28
TGFBR1-208ENST00000550253 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
TGFBR1-208ENST00000550253 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
TGFBR1-208ENST00000550253 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
TGFBR1-208ENST00000550253 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
TGFBR1-208ENST00000550253 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
TGFBR1-208ENST00000550253 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
TGFBR1-208ENST00000550253 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
TGFBR1-208ENST00000550253 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
TGFBR1-208ENST00000550253 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
TGFBR1-208ENST00000550253 CAPN15O75808 1086 aa13.09□□□□□ -0.31
TGFBR1-208ENST00000550253 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.31
TGFBR1-208ENST00000550253 KLHL34Q8N239 644 aa13.08□□□□□ -0.31
TGFBR1-208ENST00000550253 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
TGFBR1-208ENST00000550253 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
TGFBR1-208ENST00000550253 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
TGFBR1-208ENST00000550253 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
TGFBR1-208ENST00000550253 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
TGFBR1-208ENST00000550253 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
TGFBR1-208ENST00000550253 RGL2O15211 777 aa12.98□□□□□ -0.33
TGFBR1-208ENST00000550253 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
TGFBR1-208ENST00000550253 ABCB7O75027 752 aa12.95□□□□□ -0.34
TGFBR1-208ENST00000550253 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
TGFBR1-208ENST00000550253 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
TGFBR1-208ENST00000550253 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
TGFBR1-208ENST00000550253 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
TGFBR1-208ENST00000550253 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
TGFBR1-208ENST00000550253 SSUH2Q9Y2M2 353 aa12.87□□□□□ -0.35
TGFBR1-208ENST00000550253 MIER1Q8N108 512 aa12.84□□□□□ -0.35
TGFBR1-208ENST00000550253 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
TGFBR1-208ENST00000550253 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
TGFBR1-208ENST00000550253 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
TGFBR1-208ENST00000550253 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
TGFBR1-208ENST00000550253 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TGFBR1-208ENST00000550253 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
TGFBR1-208ENST00000550253 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
TGFBR1-208ENST00000550253 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
TGFBR1-208ENST00000550253 DSG3P32926 999 aa12.72□□□□□ -0.37
TGFBR1-208ENST00000550253 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
TGFBR1-208ENST00000550253 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
TGFBR1-208ENST00000550253 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
TGFBR1-208ENST00000550253 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
TGFBR1-208ENST00000550253 NBR1Q14596 966 aa12.62□□□□□ -0.39
TGFBR1-208ENST00000550253 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms