RNA–Protein interactions for RNA: ENST00000548326.1

SRSF9-203, Transcript of serine and arginine rich splicing factor 9, humanhuman

Gene SRSF9, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-203ENST00000548326 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
SRSF9-203ENST00000548326 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
SRSF9-203ENST00000548326 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
SRSF9-203ENST00000548326 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
SRSF9-203ENST00000548326 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
SRSF9-203ENST00000548326 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
SRSF9-203ENST00000548326 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
SRSF9-203ENST00000548326 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
SRSF9-203ENST00000548326 FOXD1Q16676 465 aa15.63■□□□□ 0.09
SRSF9-203ENST00000548326 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
SRSF9-203ENST00000548326 MSH5O43196 834 aa15.25■□□□□ 0.03
SRSF9-203ENST00000548326 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
SRSF9-203ENST00000548326 MYO15BQ96JP2 1530 aa15.03■□□□□ -0
SRSF9-203ENST00000548326 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
SRSF9-203ENST00000548326 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
SRSF9-203ENST00000548326 ABCC9O60706 1549 aa14.76□□□□□ -0.05
SRSF9-203ENST00000548326 NACADO15069 1562 aa14.73□□□□□ -0.05
SRSF9-203ENST00000548326 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
SRSF9-203ENST00000548326 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
SRSF9-203ENST00000548326 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.1
SRSF9-203ENST00000548326 PIAS4Q8N2W9 510 aaPredicted RBP14.41□□□□□ -0.1
SRSF9-203ENST00000548326 BAZ1AQ9NRL2 1556 aaPredicted RBP14.26□□□□□ -0.13
SRSF9-203ENST00000548326 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
SRSF9-203ENST00000548326 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
SRSF9-203ENST00000548326 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
SRSF9-203ENST00000548326 WIZO95785 1651 aa14.17□□□□□ -0.14
SRSF9-203ENST00000548326 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
SRSF9-203ENST00000548326 TOP2AP11388 1531 aaKnown RBP14.1□□□□□ -0.15
SRSF9-203ENST00000548326 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
SRSF9-203ENST00000548326 TRIM41Q8WV44 630 aa14.04□□□□□ -0.16
SRSF9-203ENST00000548326 HRCP23327 699 aa14□□□□□ -0.17
SRSF9-203ENST00000548326 PEG3Q9GZU2 1588 aa13.98□□□□□ -0.17
SRSF9-203ENST00000548326 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
SRSF9-203ENST00000548326 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
SRSF9-203ENST00000548326 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
SRSF9-203ENST00000548326 PCGF6Q9BYE7 350 aa13.9□□□□□ -0.18
SRSF9-203ENST00000548326 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
SRSF9-203ENST00000548326 TRIM26Q12899 539 aaPredicted RBP13.87□□□□□ -0.19
SRSF9-203ENST00000548326 EEA1Q15075 1411 aa13.8□□□□□ -0.2
SRSF9-203ENST00000548326 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
SRSF9-203ENST00000548326 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.21
SRSF9-203ENST00000548326 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
SRSF9-203ENST00000548326 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
SRSF9-203ENST00000548326 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
SRSF9-203ENST00000548326 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
SRSF9-203ENST00000548326 WRNQ14191 1432 aaPredicted RBP eCLIP13.65□□□□□ -0.22
SRSF9-203ENST00000548326 ADRA2BP18089 450 aa13.64□□□□□ -0.23
SRSF9-203ENST00000548326 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.235e-6■■■■□ 22.2
SRSF9-203ENST00000548326 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
SRSF9-203ENST00000548326 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
SRSF9-203ENST00000548326 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
SRSF9-203ENST00000548326 KIF21BO75037 1637 aa13.59□□□□□ -0.23
SRSF9-203ENST00000548326 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
SRSF9-203ENST00000548326 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
SRSF9-203ENST00000548326 SOGA1O94964 1423 aa13.55□□□□□ -0.24
SRSF9-203ENST00000548326 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
SRSF9-203ENST00000548326 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
SRSF9-203ENST00000548326 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
SRSF9-203ENST00000548326 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
SRSF9-203ENST00000548326 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
SRSF9-203ENST00000548326 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
SRSF9-203ENST00000548326 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
SRSF9-203ENST00000548326 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
SRSF9-203ENST00000548326 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
SRSF9-203ENST00000548326 PPARGC1BQ86YN6 1023 aaKnown RBP13.44□□□□□ -0.26
SRSF9-203ENST00000548326 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
SRSF9-203ENST00000548326 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
SRSF9-203ENST00000548326 CFTRP13569 1480 aa13.37□□□□□ -0.27
SRSF9-203ENST00000548326 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
SRSF9-203ENST00000548326 CLIP1P30622 1438 aa13.32□□□□□ -0.28
SRSF9-203ENST00000548326 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
SRSF9-203ENST00000548326 CUX1P39880 1505 aa13.3□□□□□ -0.28
SRSF9-203ENST00000548326 PRXQ9BXM0 1461 aa13.3□□□□□ -0.28
SRSF9-203ENST00000548326 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
SRSF9-203ENST00000548326 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
SRSF9-203ENST00000548326 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
SRSF9-203ENST00000548326 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
SRSF9-203ENST00000548326 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
SRSF9-203ENST00000548326 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
SRSF9-203ENST00000548326 APLP2Q06481 763 aa13.13□□□□□ -0.31
SRSF9-203ENST00000548326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
SRSF9-203ENST00000548326 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
SRSF9-203ENST00000548326 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
SRSF9-203ENST00000548326 MAP3K1Q13233 1512 aa13.08□□□□□ -0.32
SRSF9-203ENST00000548326 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
SRSF9-203ENST00000548326 CUX2O14529 1486 aa13.06□□□□□ -0.32
SRSF9-203ENST00000548326 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
SRSF9-203ENST00000548326 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
SRSF9-203ENST00000548326 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
SRSF9-203ENST00000548326 CUL7Q14999 1698 aa13.03□□□□□ -0.32
SRSF9-203ENST00000548326 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
SRSF9-203ENST00000548326 IGF1RP08069 1367 aa13.03□□□□□ -0.32
SRSF9-203ENST00000548326 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
SRSF9-203ENST00000548326 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
SRSF9-203ENST00000548326 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
SRSF9-203ENST00000548326 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
SRSF9-203ENST00000548326 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
SRSF9-203ENST00000548326 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
SRSF9-203ENST00000548326 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
SRSF9-203ENST00000548326 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms