RNA–Protein interactions for RNA: ENST00000544591.1

LINC02446-201, Transcript of long intergenic non-protein coding RNA 2446, humanhuman

TSL 2 BASIC

Gene LINC02446, Length 868 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02446-201ENST00000544591 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
LINC02446-201ENST00000544591 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
LINC02446-201ENST00000544591 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
LINC02446-201ENST00000544591 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
LINC02446-201ENST00000544591 FOXD1Q16676 465 aa20.07■□□□□ 0.8
LINC02446-201ENST00000544591 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
LINC02446-201ENST00000544591 MSH5O43196 834 aa18.88■□□□□ 0.61
LINC02446-201ENST00000544591 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
LINC02446-201ENST00000544591 PIAS4Q8N2W9 510 aaPredicted RBP18.7■□□□□ 0.58
LINC02446-201ENST00000544591 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
LINC02446-201ENST00000544591 ADRA2BP18089 450 aa18.53■□□□□ 0.56
LINC02446-201ENST00000544591 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
LINC02446-201ENST00000544591 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
LINC02446-201ENST00000544591 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
LINC02446-201ENST00000544591 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
LINC02446-201ENST00000544591 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
LINC02446-201ENST00000544591 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
LINC02446-201ENST00000544591 KCNA4P22459 653 aa16.29■□□□□ 0.2
LINC02446-201ENST00000544591 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
LINC02446-201ENST00000544591 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
LINC02446-201ENST00000544591 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
LINC02446-201ENST00000544591 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
LINC02446-201ENST00000544591 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
LINC02446-201ENST00000544591 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
LINC02446-201ENST00000544591 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
LINC02446-201ENST00000544591 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
LINC02446-201ENST00000544591 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
LINC02446-201ENST00000544591 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
LINC02446-201ENST00000544591 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
LINC02446-201ENST00000544591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC02446-201ENST00000544591 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
LINC02446-201ENST00000544591 ZBTB22O15209 634 aa15.07■□□□□ 0
LINC02446-201ENST00000544591 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
LINC02446-201ENST00000544591 CAPN15O75808 1086 aa15.01□□□□□ -0.01
LINC02446-201ENST00000544591 DSG3P32926 999 aa14.99□□□□□ -0.01
LINC02446-201ENST00000544591 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
LINC02446-201ENST00000544591 APLP2Q06481 763 aa14.8□□□□□ -0.04
LINC02446-201ENST00000544591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
LINC02446-201ENST00000544591 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
LINC02446-201ENST00000544591 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
LINC02446-201ENST00000544591 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
LINC02446-201ENST00000544591 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
LINC02446-201ENST00000544591 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
LINC02446-201ENST00000544591 ABCB7O75027 752 aa14.64□□□□□ -0.07
LINC02446-201ENST00000544591 POTEHQ6S545 545 aa14.64□□□□□ -0.07
LINC02446-201ENST00000544591 SLC24A1O60721 1099 aa14.56□□□□□ -0.08
LINC02446-201ENST00000544591 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
LINC02446-201ENST00000544591 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
LINC02446-201ENST00000544591 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
LINC02446-201ENST00000544591 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
LINC02446-201ENST00000544591 POLA2Q14181 598 aa14.3□□□□□ -0.12
LINC02446-201ENST00000544591 ATF5Q9Y2D1 282 aaPredicted RBP14.1□□□□□ -0.15
LINC02446-201ENST00000544591 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
LINC02446-201ENST00000544591 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
LINC02446-201ENST00000544591 FKBP8Q14318 412 aa14.06□□□□□ -0.16
LINC02446-201ENST00000544591 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
LINC02446-201ENST00000544591 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
LINC02446-201ENST00000544591 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
LINC02446-201ENST00000544591 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
LINC02446-201ENST00000544591 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
LINC02446-201ENST00000544591 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
LINC02446-201ENST00000544591 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
LINC02446-201ENST00000544591 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC02446-201ENST00000544591 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
LINC02446-201ENST00000544591 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
LINC02446-201ENST00000544591 FBLN2P98095 1184 aa13.58□□□□□ -0.24
LINC02446-201ENST00000544591 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
LINC02446-201ENST00000544591 HAX1O00165 279 aa13.49□□□□□ -0.25
LINC02446-201ENST00000544591 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
LINC02446-201ENST00000544591 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
LINC02446-201ENST00000544591 SSUH2Q9Y2M2 353 aa13.38□□□□□ -0.27
LINC02446-201ENST00000544591 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
LINC02446-201ENST00000544591 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
LINC02446-201ENST00000544591 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
LINC02446-201ENST00000544591 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
LINC02446-201ENST00000544591 EVX2Q03828 476 aa13.29□□□□□ -0.28
LINC02446-201ENST00000544591 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
LINC02446-201ENST00000544591 PROM2Q8N271 834 aa13.18□□□□□ -0.3
LINC02446-201ENST00000544591 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
LINC02446-201ENST00000544591 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC02446-201ENST00000544591 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
LINC02446-201ENST00000544591 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
LINC02446-201ENST00000544591 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
LINC02446-201ENST00000544591 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
LINC02446-201ENST00000544591 HAP1P54257 671 aaPredicted RBP13.06□□□□□ -0.32
LINC02446-201ENST00000544591 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
LINC02446-201ENST00000544591 GABBR2O75899 941 aa13□□□□□ -0.33
LINC02446-201ENST00000544591 PKD2Q13563 968 aa12.98□□□□□ -0.33
LINC02446-201ENST00000544591 BCANQ96GW7 911 aa12.96□□□□□ -0.33
LINC02446-201ENST00000544591 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
LINC02446-201ENST00000544591 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
LINC02446-201ENST00000544591 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
LINC02446-201ENST00000544591 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
LINC02446-201ENST00000544591 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
LINC02446-201ENST00000544591 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
LINC02446-201ENST00000544591 CLCN6P51797 869 aa12.79□□□□□ -0.36
LINC02446-201ENST00000544591 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
LINC02446-201ENST00000544591 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
LINC02446-201ENST00000544591 LHX8Q68G74 356 aa12.78□□□□□ -0.36
LINC02446-201ENST00000544591 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms