RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
CAPRIN1-208ENST00000530008 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
CAPRIN1-208ENST00000530008 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
CAPRIN1-208ENST00000530008 SENP3Q9H4L4 574 aaPredicted RBP20.3■□□□□ 0.84
CAPRIN1-208ENST00000530008 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
CAPRIN1-208ENST00000530008 ADRA2BP18089 450 aa18.9■□□□□ 0.62
CAPRIN1-208ENST00000530008 FOXD1Q16676 465 aa18.75■□□□□ 0.59
CAPRIN1-208ENST00000530008 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
CAPRIN1-208ENST00000530008 KCNA4P22459 653 aa18.48■□□□□ 0.55
CAPRIN1-208ENST00000530008 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
CAPRIN1-208ENST00000530008 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
CAPRIN1-208ENST00000530008 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
CAPRIN1-208ENST00000530008 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
CAPRIN1-208ENST00000530008 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-208ENST00000530008 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
CAPRIN1-208ENST00000530008 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-208ENST00000530008 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
CAPRIN1-208ENST00000530008 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
CAPRIN1-208ENST00000530008 ZBTB22O15209 634 aa17.03■□□□□ 0.32
CAPRIN1-208ENST00000530008 MSH5O43196 834 aa16.93■□□□□ 0.3
CAPRIN1-208ENST00000530008 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
CAPRIN1-208ENST00000530008 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
CAPRIN1-208ENST00000530008 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
CAPRIN1-208ENST00000530008 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
CAPRIN1-208ENST00000530008 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
CAPRIN1-208ENST00000530008 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
CAPRIN1-208ENST00000530008 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
CAPRIN1-208ENST00000530008 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
CAPRIN1-208ENST00000530008 MYCNP04198 464 aaPredicted RBP16.07■□□□□ 0.16
CAPRIN1-208ENST00000530008 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
CAPRIN1-208ENST00000530008 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
CAPRIN1-208ENST00000530008 FKBP8Q14318 412 aa15.88■□□□□ 0.13
CAPRIN1-208ENST00000530008 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
CAPRIN1-208ENST00000530008 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
CAPRIN1-208ENST00000530008 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
CAPRIN1-208ENST00000530008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.093e-12■■■□□ 17.8
CAPRIN1-208ENST00000530008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
CAPRIN1-208ENST00000530008 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
CAPRIN1-208ENST00000530008 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
CAPRIN1-208ENST00000530008 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
CAPRIN1-208ENST00000530008 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
CAPRIN1-208ENST00000530008 APLP2Q06481 763 aa15.14■□□□□ 0.01
CAPRIN1-208ENST00000530008 FBXO3Q9UK99 471 aa15.06■□□□□ 0
CAPRIN1-208ENST00000530008 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
CAPRIN1-208ENST00000530008 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
CAPRIN1-208ENST00000530008 PROM2Q8N271 834 aa14.92□□□□□ -0.02
CAPRIN1-208ENST00000530008 FBLN2P98095 1184 aa14.86□□□□□ -0.03
CAPRIN1-208ENST00000530008 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
CAPRIN1-208ENST00000530008 TRHP20396 242 aaPredicted RBP14.79□□□□□ -0.04
CAPRIN1-208ENST00000530008 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
CAPRIN1-208ENST00000530008 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CAPRIN1-208ENST00000530008 POLA2Q14181 598 aa14.74□□□□□ -0.05
CAPRIN1-208ENST00000530008 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
CAPRIN1-208ENST00000530008 IFNLR1Q8IU57 520 aaPredicted RBP14.72□□□□□ -0.05
CAPRIN1-208ENST00000530008 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CAPRIN1-208ENST00000530008 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
CAPRIN1-208ENST00000530008 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
CAPRIN1-208ENST00000530008 PKD2Q13563 968 aa14.57□□□□□ -0.08
CAPRIN1-208ENST00000530008 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
CAPRIN1-208ENST00000530008 HAP1P54257 671 aaPredicted RBP14.53□□□□□ -0.08
CAPRIN1-208ENST00000530008 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
CAPRIN1-208ENST00000530008 ABCB7O75027 752 aa14.45□□□□□ -0.1
CAPRIN1-208ENST00000530008 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
CAPRIN1-208ENST00000530008 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
CAPRIN1-208ENST00000530008 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
CAPRIN1-208ENST00000530008 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
CAPRIN1-208ENST00000530008 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
CAPRIN1-208ENST00000530008 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
CAPRIN1-208ENST00000530008 BCANQ96GW7 911 aa14.3□□□□□ -0.12
CAPRIN1-208ENST00000530008 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
CAPRIN1-208ENST00000530008 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.13
CAPRIN1-208ENST00000530008 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
CAPRIN1-208ENST00000530008 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
CAPRIN1-208ENST00000530008 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
CAPRIN1-208ENST00000530008 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
CAPRIN1-208ENST00000530008 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
CAPRIN1-208ENST00000530008 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
CAPRIN1-208ENST00000530008 OSCARQ8IYS5 282 aa14.22□□□□□ -0.13
CAPRIN1-208ENST00000530008 DSG3P32926 999 aa14.2□□□□□ -0.14
CAPRIN1-208ENST00000530008 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
CAPRIN1-208ENST00000530008 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPRIN1-208ENST00000530008 MIER1Q8N108 512 aa14.16□□□□□ -0.14
CAPRIN1-208ENST00000530008 RGL2O15211 777 aa14.15□□□□□ -0.14
CAPRIN1-208ENST00000530008 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
CAPRIN1-208ENST00000530008 KDM2AQ9Y2K7 1162 aa14.13□□□□□ -0.15
CAPRIN1-208ENST00000530008 PRKCSHP14314 528 aaPredicted RBP14.1□□□□□ -0.15
CAPRIN1-208ENST00000530008 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
CAPRIN1-208ENST00000530008 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
CAPRIN1-208ENST00000530008 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.17
CAPRIN1-208ENST00000530008 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
CAPRIN1-208ENST00000530008 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
CAPRIN1-208ENST00000530008 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
CAPRIN1-208ENST00000530008 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.17
CAPRIN1-208ENST00000530008 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
CAPRIN1-208ENST00000530008 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
CAPRIN1-208ENST00000530008 HS6ST3Q8IZP7 471 aa13.83□□□□□ -0.2
CAPRIN1-208ENST00000530008 GSE1Q14687 1217 aa13.79□□□□□ -0.2
CAPRIN1-208ENST00000530008 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
CAPRIN1-208ENST00000530008 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
CAPRIN1-208ENST00000530008 NUBP1P53384 320 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms