RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
AMBRA1-208ENST00000529558 AEBP2Q6ZN18 517 aaPredicted RBP11.8□□□□□ -0.52
AMBRA1-208ENST00000529558 PHF23Q9BUL5 403 aaPredicted RBP10.71□□□□□ -0.69
AMBRA1-208ENST00000529558 PLPPR3Q6T4P5 718 aa10.06□□□□□ -0.8
AMBRA1-208ENST00000529558 SENP3Q9H4L4 574 aaPredicted RBP9.89□□□□□ -0.83
AMBRA1-208ENST00000529558 EHMT2Q96KQ7 1210 aa9.43□□□□□ -0.9
AMBRA1-208ENST00000529558 ADRA2BP18089 450 aa9.42□□□□□ -0.9
AMBRA1-208ENST00000529558 KCNA4P22459 653 aa9.39□□□□□ -0.91
AMBRA1-208ENST00000529558 PPP6R1Q9UPN7 881 aa9.26□□□□□ -0.93
AMBRA1-208ENST00000529558 FOXD1Q16676 465 aa9.13□□□□□ -0.95
AMBRA1-208ENST00000529558 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
AMBRA1-208ENST00000529558 SLC4A1APQ9BWU0 796 aaKnown RBP9.04□□□□□ -0.96
AMBRA1-208ENST00000529558 PPP4R3CPQ6ZMV5 832 aa8.94□□□□□ -0.98
AMBRA1-208ENST00000529558 NCBP3Q53F19 620 aaKnown RBP8.86□□□□□ -0.99
AMBRA1-208ENST00000529558 NPM3O75607 178 aaKnown RBP8.75□□□□□ -1.01
AMBRA1-208ENST00000529558 PIAS4Q8N2W9 510 aaPredicted RBP8.73□□□□□ -1.01
AMBRA1-208ENST00000529558 ZBTB22O15209 634 aa8.66□□□□□ -1.02
AMBRA1-208ENST00000529558 SLC24A1O60721 1099 aa8.58□□□□□ -1.04
AMBRA1-208ENST00000529558 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
AMBRA1-208ENST00000529558 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
AMBRA1-208ENST00000529558 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
AMBRA1-208ENST00000529558 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
AMBRA1-208ENST00000529558 FOXD4L1Q9NU39 408 aa8.46□□□□□ -1.06
AMBRA1-208ENST00000529558 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
AMBRA1-208ENST00000529558 RNF216Q9NWF9 866 aaPredicted RBP8.26□□□□□ -1.09
AMBRA1-208ENST00000529558 MAPK8IP2Q13387 824 aaPredicted RBP8.25□□□□□ -1.09
AMBRA1-208ENST00000529558 MSH5O43196 834 aa8.17□□□□□ -1.1
AMBRA1-208ENST00000529558 FKBP8Q14318 412 aa8.16□□□□□ -1.1
AMBRA1-208ENST00000529558 ATXN8OSP0DMR3 200 aa8.14□□□□□ -1.11
AMBRA1-208ENST00000529558 SLC4A2P04920 1241 aa8.13□□□□□ -1.11
AMBRA1-208ENST00000529558 HOXD11P31277 338 aaPredicted RBP8.08□□□□□ -1.12
AMBRA1-208ENST00000529558 MYCNP04198 464 aaPredicted RBP8.05□□□□□ -1.12
AMBRA1-208ENST00000529558 DMRT2Q9Y5R5 561 aa8□□□□□ -1.13
AMBRA1-208ENST00000529558 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
AMBRA1-208ENST00000529558 PLCB2Q00722 1185 aa7.79□□□□□ -1.16
AMBRA1-208ENST00000529558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.72□□□□□ -1.17
AMBRA1-208ENST00000529558 HNRNPUL2Q1KMD3 747 aaKnown RBP7.72□□□□□ -1.17
AMBRA1-208ENST00000529558 FBXO3Q9UK99 471 aa7.72□□□□□ -1.17
AMBRA1-208ENST00000529558 SAMD1Q6SPF0 538 aaPredicted RBP7.71□□□□□ -1.18
AMBRA1-208ENST00000529558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.67□□□□□ -1.182e-8■■■□□ 14.6
AMBRA1-208ENST00000529558 HAP1P54257 671 aaPredicted RBP7.66□□□□□ -1.18
AMBRA1-208ENST00000529558 BCANQ96GW7 911 aa7.64□□□□□ -1.19
AMBRA1-208ENST00000529558 ZNF219Q9P2Y4 722 aaPredicted RBP7.62□□□□□ -1.19
AMBRA1-208ENST00000529558 U3KPZ7 1027 aaPredicted RBP7.62□□□□□ -1.19
AMBRA1-208ENST00000529558 SPDYE4A6NLX3 237 aa7.61□□□□□ -1.19
AMBRA1-208ENST00000529558 DCAF8L1A6NGE4 600 aa7.59□□□□□ -1.19
AMBRA1-208ENST00000529558 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
AMBRA1-208ENST00000529558 VASPP50552 380 aaPredicted RBP7.59□□□□□ -1.19
AMBRA1-208ENST00000529558 VSIG10Q8N0Z9 540 aa7.59□□□□□ -1.19
AMBRA1-208ENST00000529558 PROM2Q8N271 834 aa7.59□□□□□ -1.19
AMBRA1-208ENST00000529558 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
AMBRA1-208ENST00000529558 IFNLR1Q8IU57 520 aaPredicted RBP7.56□□□□□ -1.2
AMBRA1-208ENST00000529558 DCAF8L2P0C7V8 631 aa7.55□□□□□ -1.2
AMBRA1-208ENST00000529558 PKD2Q13563 968 aa7.53□□□□□ -1.2
AMBRA1-208ENST00000529558 MKRN4PQ13434 485 aaPredicted RBP7.51□□□□□ -1.21
AMBRA1-208ENST00000529558 APLP2Q06481 763 aa7.48□□□□□ -1.21
AMBRA1-208ENST00000529558 KDM2AQ9Y2K7 1162 aa7.46□□□□□ -1.22
AMBRA1-208ENST00000529558 BBXQ8WY36 941 aaPredicted RBP7.45□□□□□ -1.22
AMBRA1-208ENST00000529558 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
AMBRA1-208ENST00000529558 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.43□□□□□ -1.22
AMBRA1-208ENST00000529558 FBLN2P98095 1184 aa7.42□□□□□ -1.22
AMBRA1-208ENST00000529558 PAXIP1Q6ZW49 1069 aaPredicted RBP7.39□□□□□ -1.23
AMBRA1-208ENST00000529558 NPM1P06748 294 aaKnown RBP eCLIP7.38□□□□□ -1.23
AMBRA1-208ENST00000529558 CFAP44Q96MT7 982 aa7.36□□□□□ -1.23
AMBRA1-208ENST00000529558 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
AMBRA1-208ENST00000529558 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
AMBRA1-208ENST00000529558 KLHL34Q8N239 644 aa7.32□□□□□ -1.24
AMBRA1-208ENST00000529558 POLA2Q14181 598 aa7.31□□□□□ -1.24
AMBRA1-208ENST00000529558 SPRYD3Q8NCJ5 442 aa7.31□□□□□ -1.24
AMBRA1-208ENST00000529558 TSHZ2Q9NRE2 1034 aa7.29□□□□□ -1.24
AMBRA1-208ENST00000529558 RGL2O15211 777 aa7.28□□□□□ -1.24
AMBRA1-208ENST00000529558 TRHP20396 242 aaPredicted RBP7.27□□□□□ -1.25
AMBRA1-208ENST00000529558 SPINK5Q9NQ38 1064 aaPredicted RBP7.24□□□□□ -1.25
AMBRA1-208ENST00000529558 STAG3Q9UJ98 1225 aa7.24□□□□□ -1.25
AMBRA1-208ENST00000529558 DNAJC5Q9H3Z4 198 aa7.21□□□□□ -1.26
AMBRA1-208ENST00000529558 ZBTB12Q9Y330 459 aaPredicted RBP7.2□□□□□ -1.26
AMBRA1-208ENST00000529558 PLCD3Q8N3E9 789 aa7.19□□□□□ -1.26
AMBRA1-208ENST00000529558 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
AMBRA1-208ENST00000529558 NBR1Q14596 966 aa7.18□□□□□ -1.26
AMBRA1-208ENST00000529558 CAPN15O75808 1086 aa7.16□□□□□ -1.26
AMBRA1-208ENST00000529558 MIER1Q8N108 512 aa7.15□□□□□ -1.26
AMBRA1-208ENST00000529558 TIMELESSQ9UNS1 1208 aa7.15□□□□□ -1.26
AMBRA1-208ENST00000529558 ZNF692Q9BU19 519 aaPredicted RBP7.14□□□□□ -1.27
AMBRA1-208ENST00000529558 TULP1O00294 542 aaPredicted RBP7.13□□□□□ -1.27
AMBRA1-208ENST00000529558 CIZ1Q9ULV3 898 aaPredicted RBP7.12□□□□□ -1.27
AMBRA1-208ENST00000529558 GTF3C3Q9Y5Q9 886 aa7.12□□□□□ -1.27
AMBRA1-208ENST00000529558 HS6ST3Q8IZP7 471 aa7.1□□□□□ -1.27
AMBRA1-208ENST00000529558 TRIM41Q8WV44 630 aa7.09□□□□□ -1.27
AMBRA1-208ENST00000529558 RNF39Q9H2S5 420 aa7.08□□□□□ -1.28
AMBRA1-208ENST00000529558 ZBTB47Q9UFB7 747 aaPredicted RBP7.08□□□□□ -1.28
AMBRA1-208ENST00000529558 SSUH2Q9Y2M2 353 aa7.08□□□□□ -1.28
AMBRA1-208ENST00000529558 SPDYE2BA6NHP3 402 aa7.07□□□□□ -1.28
AMBRA1-208ENST00000529558 ABCB7O75027 752 aa7.07□□□□□ -1.28
AMBRA1-208ENST00000529558 SPDYE6P0CI01 402 aa7.07□□□□□ -1.28
AMBRA1-208ENST00000529558 SPDYE2Q495Y8 402 aa7.07□□□□□ -1.28
AMBRA1-208ENST00000529558 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
AMBRA1-208ENST00000529558 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
AMBRA1-208ENST00000529558 PLEKHG5O94827 1062 aa7.05□□□□□ -1.28
AMBRA1-208ENST00000529558 ARXQ96QS3 562 aa7.05□□□□□ -1.28
AMBRA1-208ENST00000529558 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms