RNA–Protein interactions for RNA: ENST00000518428.1

AC048387.1-201, humanhuman

TSL 3 BASIC

Gene AC048387.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048387.1-201ENST00000518428 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
AC048387.1-201ENST00000518428 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
AC048387.1-201ENST00000518428 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
AC048387.1-201ENST00000518428 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
AC048387.1-201ENST00000518428 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
AC048387.1-201ENST00000518428 FOXD1Q16676 465 aa15.26■□□□□ 0.03
AC048387.1-201ENST00000518428 MSH5O43196 834 aa14.63□□□□□ -0.07
AC048387.1-201ENST00000518428 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
AC048387.1-201ENST00000518428 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
AC048387.1-201ENST00000518428 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
AC048387.1-201ENST00000518428 ADRA2BP18089 450 aa13.79□□□□□ -0.2
AC048387.1-201ENST00000518428 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
AC048387.1-201ENST00000518428 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
AC048387.1-201ENST00000518428 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
AC048387.1-201ENST00000518428 KCNA4P22459 653 aa12.88□□□□□ -0.35
AC048387.1-201ENST00000518428 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
AC048387.1-201ENST00000518428 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
AC048387.1-201ENST00000518428 NCBP3Q53F19 620 aaKnown RBP12.63□□□□□ -0.39
AC048387.1-201ENST00000518428 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
AC048387.1-201ENST00000518428 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
AC048387.1-201ENST00000518428 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
AC048387.1-201ENST00000518428 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
AC048387.1-201ENST00000518428 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
AC048387.1-201ENST00000518428 POTEHQ6S545 545 aa12.37□□□□□ -0.43
AC048387.1-201ENST00000518428 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
AC048387.1-201ENST00000518428 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
AC048387.1-201ENST00000518428 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
AC048387.1-201ENST00000518428 RNF216Q9NWF9 866 aaPredicted RBP12.21□□□□□ -0.45
AC048387.1-201ENST00000518428 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
AC048387.1-201ENST00000518428 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
AC048387.1-201ENST00000518428 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
AC048387.1-201ENST00000518428 ZBTB22O15209 634 aa11.88□□□□□ -0.51
AC048387.1-201ENST00000518428 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
AC048387.1-201ENST00000518428 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
AC048387.1-201ENST00000518428 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
AC048387.1-201ENST00000518428 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
AC048387.1-201ENST00000518428 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
AC048387.1-201ENST00000518428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.57
AC048387.1-201ENST00000518428 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
AC048387.1-201ENST00000518428 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
AC048387.1-201ENST00000518428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
AC048387.1-201ENST00000518428 DSG3P32926 999 aa11.29□□□□□ -0.6
AC048387.1-201ENST00000518428 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
AC048387.1-201ENST00000518428 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
AC048387.1-201ENST00000518428 FKBP8Q14318 412 aa11.18□□□□□ -0.62
AC048387.1-201ENST00000518428 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
AC048387.1-201ENST00000518428 CAPN15O75808 1086 aa11.13□□□□□ -0.63
AC048387.1-201ENST00000518428 APLP2Q06481 763 aa11.11□□□□□ -0.63
AC048387.1-201ENST00000518428 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
AC048387.1-201ENST00000518428 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
AC048387.1-201ENST00000518428 ZNF219Q9P2Y4 722 aaPredicted RBP10.98□□□□□ -0.65
AC048387.1-201ENST00000518428 CHRDL2Q6WN34 429 aa10.97□□□□□ -0.65
AC048387.1-201ENST00000518428 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
AC048387.1-201ENST00000518428 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
AC048387.1-201ENST00000518428 ABCB7O75027 752 aa10.8□□□□□ -0.68
AC048387.1-201ENST00000518428 POLA2Q14181 598 aa10.77□□□□□ -0.69
AC048387.1-201ENST00000518428 BCANQ96GW7 911 aa10.77□□□□□ -0.69
AC048387.1-201ENST00000518428 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
AC048387.1-201ENST00000518428 PRKCSHP14314 528 aaPredicted RBP10.76□□□□□ -0.69
AC048387.1-201ENST00000518428 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
AC048387.1-201ENST00000518428 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
AC048387.1-201ENST00000518428 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
AC048387.1-201ENST00000518428 FBLN2P98095 1184 aa10.67□□□□□ -0.7
AC048387.1-201ENST00000518428 PLSCR2Q9NRY7 297 aa10.65□□□□□ -0.7
AC048387.1-201ENST00000518428 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
AC048387.1-201ENST00000518428 HAX1O00165 279 aa10.61□□□□□ -0.71
AC048387.1-201ENST00000518428 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
AC048387.1-201ENST00000518428 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
AC048387.1-201ENST00000518428 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
AC048387.1-201ENST00000518428 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
AC048387.1-201ENST00000518428 PROM2Q8N271 834 aa10.51□□□□□ -0.73
AC048387.1-201ENST00000518428 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
AC048387.1-201ENST00000518428 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
AC048387.1-201ENST00000518428 LHX8Q68G74 356 aa10.43□□□□□ -0.74
AC048387.1-201ENST00000518428 EVX2Q03828 476 aa10.41□□□□□ -0.74
AC048387.1-201ENST00000518428 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
AC048387.1-201ENST00000518428 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
AC048387.1-201ENST00000518428 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
AC048387.1-201ENST00000518428 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
AC048387.1-201ENST00000518428 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
AC048387.1-201ENST00000518428 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
AC048387.1-201ENST00000518428 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
AC048387.1-201ENST00000518428 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
AC048387.1-201ENST00000518428 PKD2Q13563 968 aa10.32□□□□□ -0.76
AC048387.1-201ENST00000518428 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
AC048387.1-201ENST00000518428 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
AC048387.1-201ENST00000518428 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.28□□□□□ -0.76
AC048387.1-201ENST00000518428 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
AC048387.1-201ENST00000518428 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
AC048387.1-201ENST00000518428 TIMELESSQ9UNS1 1208 aa10.26□□□□□ -0.77
AC048387.1-201ENST00000518428 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
AC048387.1-201ENST00000518428 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
AC048387.1-201ENST00000518428 PAXIP1Q6ZW49 1069 aaPredicted RBP10.21□□□□□ -0.77
AC048387.1-201ENST00000518428 PABPN1Q86U42 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
AC048387.1-201ENST00000518428 ARXQ96QS3 562 aa10.2□□□□□ -0.78
AC048387.1-201ENST00000518428 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
AC048387.1-201ENST00000518428 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
AC048387.1-201ENST00000518428 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
AC048387.1-201ENST00000518428 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
AC048387.1-201ENST00000518428 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms