RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
RNU6-943P-201ENST00000516960 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
RNU6-943P-201ENST00000516960 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
RNU6-943P-201ENST00000516960 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
RNU6-943P-201ENST00000516960 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
RNU6-943P-201ENST00000516960 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
RNU6-943P-201ENST00000516960 KCNA4P22459 653 aa15.08■□□□□ 0
RNU6-943P-201ENST00000516960 ADRA2BP18089 450 aa14.93□□□□□ -0.02
RNU6-943P-201ENST00000516960 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
RNU6-943P-201ENST00000516960 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
RNU6-943P-201ENST00000516960 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
RNU6-943P-201ENST00000516960 FOXD1Q16676 465 aa14.29□□□□□ -0.12
RNU6-943P-201ENST00000516960 SLC24A1O60721 1099 aa14.27□□□□□ -0.13
RNU6-943P-201ENST00000516960 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
RNU6-943P-201ENST00000516960 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
RNU6-943P-201ENST00000516960 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
RNU6-943P-201ENST00000516960 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
RNU6-943P-201ENST00000516960 ZBTB22O15209 634 aa13.88□□□□□ -0.19
RNU6-943P-201ENST00000516960 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
RNU6-943P-201ENST00000516960 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
RNU6-943P-201ENST00000516960 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
RNU6-943P-201ENST00000516960 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
RNU6-943P-201ENST00000516960 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
RNU6-943P-201ENST00000516960 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
RNU6-943P-201ENST00000516960 FKBP8Q14318 412 aa13.21□□□□□ -0.29
RNU6-943P-201ENST00000516960 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
RNU6-943P-201ENST00000516960 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
RNU6-943P-201ENST00000516960 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
RNU6-943P-201ENST00000516960 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
RNU6-943P-201ENST00000516960 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
RNU6-943P-201ENST00000516960 MSH5O43196 834 aa12.76□□□□□ -0.37
RNU6-943P-201ENST00000516960 PLCB2Q00722 1185 aa12.75□□□□□ -0.37
RNU6-943P-201ENST00000516960 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
RNU6-943P-201ENST00000516960 BCANQ96GW7 911 aa12.61□□□□□ -0.39
RNU6-943P-201ENST00000516960 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
RNU6-943P-201ENST00000516960 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
RNU6-943P-201ENST00000516960 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
RNU6-943P-201ENST00000516960 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
RNU6-943P-201ENST00000516960 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
RNU6-943P-201ENST00000516960 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
RNU6-943P-201ENST00000516960 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
RNU6-943P-201ENST00000516960 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
RNU6-943P-201ENST00000516960 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
RNU6-943P-201ENST00000516960 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
RNU6-943P-201ENST00000516960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
RNU6-943P-201ENST00000516960 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
RNU6-943P-201ENST00000516960 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
RNU6-943P-201ENST00000516960 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
RNU6-943P-201ENST00000516960 PKD2Q13563 968 aa12.16□□□□□ -0.46
RNU6-943P-201ENST00000516960 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
RNU6-943P-201ENST00000516960 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
RNU6-943P-201ENST00000516960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNU6-943P-201ENST00000516960 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
RNU6-943P-201ENST00000516960 PROM2Q8N271 834 aa12.11□□□□□ -0.47
RNU6-943P-201ENST00000516960 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
RNU6-943P-201ENST00000516960 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
RNU6-943P-201ENST00000516960 FBLN2P98095 1184 aa12.09□□□□□ -0.47
RNU6-943P-201ENST00000516960 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
RNU6-943P-201ENST00000516960 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
RNU6-943P-201ENST00000516960 CFAP44Q96MT7 982 aa12.02□□□□□ -0.49
RNU6-943P-201ENST00000516960 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
RNU6-943P-201ENST00000516960 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNU6-943P-201ENST00000516960 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
RNU6-943P-201ENST00000516960 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
RNU6-943P-201ENST00000516960 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
RNU6-943P-201ENST00000516960 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
RNU6-943P-201ENST00000516960 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
RNU6-943P-201ENST00000516960 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
RNU6-943P-201ENST00000516960 APLP2Q06481 763 aa11.88□□□□□ -0.51
RNU6-943P-201ENST00000516960 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
RNU6-943P-201ENST00000516960 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
RNU6-943P-201ENST00000516960 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
RNU6-943P-201ENST00000516960 ARXQ96QS3 562 aa11.83□□□□□ -0.52
RNU6-943P-201ENST00000516960 NBR1Q14596 966 aa11.82□□□□□ -0.52
RNU6-943P-201ENST00000516960 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
RNU6-943P-201ENST00000516960 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
RNU6-943P-201ENST00000516960 RGL2O15211 777 aa11.75□□□□□ -0.53
RNU6-943P-201ENST00000516960 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
RNU6-943P-201ENST00000516960 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
RNU6-943P-201ENST00000516960 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
RNU6-943P-201ENST00000516960 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
RNU6-943P-201ENST00000516960 POLA2Q14181 598 aa11.57□□□□□ -0.56
RNU6-943P-201ENST00000516960 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
RNU6-943P-201ENST00000516960 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
RNU6-943P-201ENST00000516960 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
RNU6-943P-201ENST00000516960 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
RNU6-943P-201ENST00000516960 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
RNU6-943P-201ENST00000516960 MIER1Q8N108 512 aa11.48□□□□□ -0.57
RNU6-943P-201ENST00000516960 HS6ST3Q8IZP7 471 aa11.47□□□□□ -0.57
RNU6-943P-201ENST00000516960 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
RNU6-943P-201ENST00000516960 TRIM41Q8WV44 630 aa11.42□□□□□ -0.58
RNU6-943P-201ENST00000516960 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
RNU6-943P-201ENST00000516960 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
RNU6-943P-201ENST00000516960 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
RNU6-943P-201ENST00000516960 CAPN15O75808 1086 aa11.33□□□□□ -0.6
RNU6-943P-201ENST00000516960 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
RNU6-943P-201ENST00000516960 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
RNU6-943P-201ENST00000516960 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
RNU6-943P-201ENST00000516960 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
RNU6-943P-201ENST00000516960 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms