RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 CHIC1Q5VXU3 224 aa4.82□□□□□ -1.64
RN7SKP88-201ENST00000516847 AEBP2Q6ZN18 517 aaPredicted RBP4.7□□□□□ -1.66
RN7SKP88-201ENST00000516847 PHF23Q9BUL5 403 aaPredicted RBP4.22□□□□□ -1.73
RN7SKP88-201ENST00000516847 PLPPR3Q6T4P5 718 aa4.01□□□□□ -1.77
RN7SKP88-201ENST00000516847 SENP3Q9H4L4 574 aaPredicted RBP3.99□□□□□ -1.77
RN7SKP88-201ENST00000516847 ADRA2BP18089 450 aa3.68□□□□□ -1.82
RN7SKP88-201ENST00000516847 KCNA4P22459 653 aa3.66□□□□□ -1.82
RN7SKP88-201ENST00000516847 FOXD1Q16676 465 aa3.65□□□□□ -1.83
RN7SKP88-201ENST00000516847 PPP6R1Q9UPN7 881 aa3.65□□□□□ -1.83
RN7SKP88-201ENST00000516847 EHMT2Q96KQ7 1210 aa3.62□□□□□ -1.83
RN7SKP88-201ENST00000516847 NCBP3Q53F19 620 aaKnown RBP3.53□□□□□ -1.84
RN7SKP88-201ENST00000516847 PPP4R3CPQ6ZMV5 832 aa3.53□□□□□ -1.84
RN7SKP88-201ENST00000516847 SLC4A1APQ9BWU0 796 aaKnown RBP3.53□□□□□ -1.84
RN7SKP88-201ENST00000516847 CSRNP3Q8WYN3 585 aa3.52□□□□□ -1.85
RN7SKP88-201ENST00000516847 PIAS4Q8N2W9 510 aaPredicted RBP3.49□□□□□ -1.85
RN7SKP88-201ENST00000516847 NPM3O75607 178 aaKnown RBP3.44□□□□□ -1.86
RN7SKP88-201ENST00000516847 CNKSR2Q8WXI2 1034 aa3.42□□□□□ -1.86
RN7SKP88-201ENST00000516847 DNAJC5BQ9UF47 199 aa3.42□□□□□ -1.86
RN7SKP88-201ENST00000516847 SCAF1Q9H7N4 1312 aaKnown RBP3.41□□□□□ -1.86
RN7SKP88-201ENST00000516847 ZBTB22O15209 634 aa3.37□□□□□ -1.87
RN7SKP88-201ENST00000516847 FOXD4L1Q9NU39 408 aa3.35□□□□□ -1.87
RN7SKP88-201ENST00000516847 MSH5O43196 834 aa3.33□□□□□ -1.88
RN7SKP88-201ENST00000516847 RNF216Q9NWF9 866 aaPredicted RBP3.31□□□□□ -1.88
RN7SKP88-201ENST00000516847 AMER1Q5JTC6 1135 aaPredicted RBP3.28□□□□□ -1.88
RN7SKP88-201ENST00000516847 SLC24A1O60721 1099 aa3.26□□□□□ -1.89
RN7SKP88-201ENST00000516847 ATXN8OSP0DMR3 200 aa3.25□□□□□ -1.89
RN7SKP88-201ENST00000516847 HOXD11P31277 338 aaPredicted RBP3.25□□□□□ -1.89
RN7SKP88-201ENST00000516847 MAPK8IP2Q13387 824 aaPredicted RBP3.23□□□□□ -1.89
RN7SKP88-201ENST00000516847 RTN4Q9NQC3 1192 aaKnown RBP3.22□□□□□ -1.89
RN7SKP88-201ENST00000516847 DMRT2Q9Y5R5 561 aa3.21□□□□□ -1.9
RN7SKP88-201ENST00000516847 MYCNP04198 464 aaPredicted RBP3.2□□□□□ -1.9
RN7SKP88-201ENST00000516847 SLC4A2P04920 1241 aa3.2□□□□□ -1.9
RN7SKP88-201ENST00000516847 FKBP8Q14318 412 aa3.16□□□□□ -1.9
RN7SKP88-201ENST00000516847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.11□□□□□ -1.91
RN7SKP88-201ENST00000516847 HNRNPUL2Q1KMD3 747 aaKnown RBP3.11□□□□□ -1.91
RN7SKP88-201ENST00000516847 SAMD1Q6SPF0 538 aaPredicted RBP3.09□□□□□ -1.91
RN7SKP88-201ENST00000516847 ATF5Q9Y2D1 282 aaPredicted RBP3.05□□□□□ -1.92
RN7SKP88-201ENST00000516847 APLP2Q06481 763 aa3.04□□□□□ -1.92
RN7SKP88-201ENST00000516847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.04□□□□□ -1.92
RN7SKP88-201ENST00000516847 FBXO3Q9UK99 471 aa3.04□□□□□ -1.92
RN7SKP88-201ENST00000516847 U3KPZ7 1027 aaPredicted RBP3.03□□□□□ -1.92
RN7SKP88-201ENST00000516847 PROM2Q8N271 834 aa3.01□□□□□ -1.93
RN7SKP88-201ENST00000516847 DCAF8L1A6NGE4 600 aa3□□□□□ -1.93
RN7SKP88-201ENST00000516847 ZNF219Q9P2Y4 722 aaPredicted RBP3□□□□□ -1.93
RN7SKP88-201ENST00000516847 PLCB2Q00722 1185 aa2.99□□□□□ -1.93
RN7SKP88-201ENST00000516847 SPDYE4A6NLX3 237 aa2.98□□□□□ -1.93
RN7SKP88-201ENST00000516847 VASPP50552 380 aaPredicted RBP2.97□□□□□ -1.93
RN7SKP88-201ENST00000516847 FBLN2P98095 1184 aa2.95□□□□□ -1.94
RN7SKP88-201ENST00000516847 MKRN4PQ13434 485 aaPredicted RBP2.95□□□□□ -1.94
RN7SKP88-201ENST00000516847 IFNLR1Q8IU57 520 aaPredicted RBP2.93□□□□□ -1.94
RN7SKP88-201ENST00000516847 VSIG10Q8N0Z9 540 aa2.93□□□□□ -1.94
RN7SKP88-201ENST00000516847 BCANQ96GW7 911 aa2.93□□□□□ -1.94
RN7SKP88-201ENST00000516847 PKD2Q13563 968 aa2.92□□□□□ -1.94
RN7SKP88-201ENST00000516847 HAP1P54257 671 aaPredicted RBP2.91□□□□□ -1.94
RN7SKP88-201ENST00000516847 ZBTB12Q9Y330 459 aaPredicted RBP2.91□□□□□ -1.94
RN7SKP88-201ENST00000516847 BBXQ8WY36 941 aaPredicted RBP2.89□□□□□ -1.95
RN7SKP88-201ENST00000516847 DCAF8L2P0C7V8 631 aa2.88□□□□□ -1.95
RN7SKP88-201ENST00000516847 POLA2Q14181 598 aa2.88□□□□□ -1.95
RN7SKP88-201ENST00000516847 SPOCK2Q92563 424 aa2.88□□□□□ -1.95
RN7SKP88-201ENST00000516847 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.88□□□□□ -1.95
RN7SKP88-201ENST00000516847 STAG3Q9UJ98 1225 aa2.87□□□□□ -1.95
RN7SKP88-201ENST00000516847 TAOK2Q9UL54 1235 aa2.87□□□□□ -1.95
RN7SKP88-201ENST00000516847 TRHP20396 242 aaPredicted RBP2.86□□□□□ -1.95
RN7SKP88-201ENST00000516847 RNF39Q9H2S5 420 aa2.86□□□□□ -1.95
RN7SKP88-201ENST00000516847 SPINK5Q9NQ38 1064 aaPredicted RBP2.86□□□□□ -1.95
RN7SKP88-201ENST00000516847 ECM2O94769 699 aaPredicted RBP2.85□□□□□ -1.95
RN7SKP88-201ENST00000516847 C1QBPQ07021 282 aaKnown RBP2.85□□□□□ -1.95
RN7SKP88-201ENST00000516847 SPDYE2BA6NHP3 402 aa2.84□□□□□ -1.95
RN7SKP88-201ENST00000516847 CAPN15O75808 1086 aa2.84□□□□□ -1.95
RN7SKP88-201ENST00000516847 SPDYE6P0CI01 402 aa2.84□□□□□ -1.95
RN7SKP88-201ENST00000516847 SPDYE2Q495Y8 402 aa2.84□□□□□ -1.95
RN7SKP88-201ENST00000516847 KLHL34Q8N239 644 aa2.84□□□□□ -1.95
RN7SKP88-201ENST00000516847 NPM1P06748 294 aaKnown RBP eCLIP2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 PAXIP1Q6ZW49 1069 aaPredicted RBP2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 TRIM41Q8WV44 630 aa2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 ZBTB47Q9UFB7 747 aaPredicted RBP2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 KDM2AQ9Y2K7 1162 aa2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 SSUH2Q9Y2M2 353 aa2.83□□□□□ -1.96
RN7SKP88-201ENST00000516847 PLCD3Q8N3E9 789 aa2.82□□□□□ -1.96
RN7SKP88-201ENST00000516847 SPRYD3Q8NCJ5 442 aa2.82□□□□□ -1.96
RN7SKP88-201ENST00000516847 ZNF692Q9BU19 519 aaPredicted RBP2.82□□□□□ -1.96
RN7SKP88-201ENST00000516847 DNAJC5Q9H3Z4 198 aa2.82□□□□□ -1.96
RN7SKP88-201ENST00000516847 RGL2O15211 777 aa2.81□□□□□ -1.96
RN7SKP88-201ENST00000516847 PRKCSHP14314 528 aaPredicted RBP2.81□□□□□ -1.96
RN7SKP88-201ENST00000516847 CFAP44Q96MT7 982 aa2.81□□□□□ -1.96
RN7SKP88-201ENST00000516847 PLEKHG5O94827 1062 aa2.8□□□□□ -1.96
RN7SKP88-201ENST00000516847 TPRNQ4KMQ1 711 aa2.8□□□□□ -1.96
RN7SKP88-201ENST00000516847 ABCB7O75027 752 aa2.79□□□□□ -1.96
RN7SKP88-201ENST00000516847 HS6ST3Q8IZP7 471 aa2.79□□□□□ -1.96
RN7SKP88-201ENST00000516847 MIER1Q8N108 512 aa2.79□□□□□ -1.96
RN7SKP88-201ENST00000516847 DSG3P32926 999 aa2.78□□□□□ -1.96
RN7SKP88-201ENST00000516847 PABPN1Q86U42 306 aaKnown RBP eCLIP2.78□□□□□ -1.96
RN7SKP88-201ENST00000516847 OSCARQ8IYS5 282 aa2.78□□□□□ -1.96
RN7SKP88-201ENST00000516847 TSHZ2Q9NRE2 1034 aa2.78□□□□□ -1.96
RN7SKP88-201ENST00000516847 CHGAP10645 457 aaKnown RBP2.77□□□□□ -1.97
RN7SKP88-201ENST00000516847 NBR1Q14596 966 aa2.76□□□□□ -1.97
RN7SKP88-201ENST00000516847 GSE1Q14687 1217 aa2.76□□□□□ -1.97
RN7SKP88-201ENST00000516847 CIZ1Q9ULV3 898 aaPredicted RBP2.76□□□□□ -1.97
RN7SKP88-201ENST00000516847 ERICH6Q7L0X2 663 aa2.74□□□□□ -1.97
RN7SKP88-201ENST00000516847 RNF25Q96BH1 459 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms