RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
RNU6ATAC39P-201ENST00000516309 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
RNU6ATAC39P-201ENST00000516309 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
RNU6ATAC39P-201ENST00000516309 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
RNU6ATAC39P-201ENST00000516309 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
RNU6ATAC39P-201ENST00000516309 FOXD1Q16676 465 aa15.65■□□□□ 0.1
RNU6ATAC39P-201ENST00000516309 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
RNU6ATAC39P-201ENST00000516309 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
RNU6ATAC39P-201ENST00000516309 SLC24A1O60721 1099 aa15.08■□□□□ 0
RNU6ATAC39P-201ENST00000516309 MSH5O43196 834 aa14.89□□□□□ -0.03
RNU6ATAC39P-201ENST00000516309 KCNA4P22459 653 aa14.68□□□□□ -0.06
RNU6ATAC39P-201ENST00000516309 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
RNU6ATAC39P-201ENST00000516309 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 AMER1Q5JTC6 1135 aaPredicted RBP14.23□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
RNU6ATAC39P-201ENST00000516309 ADRA2BP18089 450 aa14.11□□□□□ -0.15
RNU6ATAC39P-201ENST00000516309 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
RNU6ATAC39P-201ENST00000516309 NCBP3Q53F19 620 aaKnown RBP13.6□□□□□ -0.23
RNU6ATAC39P-201ENST00000516309 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
RNU6ATAC39P-201ENST00000516309 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
RNU6ATAC39P-201ENST00000516309 ZBTB22O15209 634 aa13.5□□□□□ -0.25
RNU6ATAC39P-201ENST00000516309 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
RNU6ATAC39P-201ENST00000516309 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
RNU6ATAC39P-201ENST00000516309 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
RNU6ATAC39P-201ENST00000516309 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 FKBP8Q14318 412 aa13.09□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 BCANQ96GW7 911 aa13.09□□□□□ -0.31
RNU6ATAC39P-201ENST00000516309 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
RNU6ATAC39P-201ENST00000516309 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
RNU6ATAC39P-201ENST00000516309 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
RNU6ATAC39P-201ENST00000516309 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
RNU6ATAC39P-201ENST00000516309 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 ARXQ96QS3 562 aa12.84□□□□□ -0.35
RNU6ATAC39P-201ENST00000516309 TPRNQ4KMQ1 711 aa12.78□□□□□ -0.36
RNU6ATAC39P-201ENST00000516309 POTEHQ6S545 545 aa12.74□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
RNU6ATAC39P-201ENST00000516309 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
RNU6ATAC39P-201ENST00000516309 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
RNU6ATAC39P-201ENST00000516309 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
RNU6ATAC39P-201ENST00000516309 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
RNU6ATAC39P-201ENST00000516309 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
RNU6ATAC39P-201ENST00000516309 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 DCAF8L1A6NGE4 600 aa12.41□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
RNU6ATAC39P-201ENST00000516309 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
RNU6ATAC39P-201ENST00000516309 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
RNU6ATAC39P-201ENST00000516309 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 FBXO3Q9UK99 471 aa12.29□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 RNF216Q9NWF9 866 aaPredicted RBP12.28□□□□□ -0.44
RNU6ATAC39P-201ENST00000516309 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 FBLN2P98095 1184 aa12.24□□□□□ -0.45
RNU6ATAC39P-201ENST00000516309 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
RNU6ATAC39P-201ENST00000516309 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 NBR1Q14596 966 aa12.1□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
RNU6ATAC39P-201ENST00000516309 PKD2Q13563 968 aa12.06□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 HOXD11P31277 338 aaPredicted RBP12.05□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
RNU6ATAC39P-201ENST00000516309 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
RNU6ATAC39P-201ENST00000516309 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
RNU6ATAC39P-201ENST00000516309 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 SPRYD3Q8NCJ5 442 aa11.94□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
RNU6ATAC39P-201ENST00000516309 APLP2Q06481 763 aa11.86□□□□□ -0.51
RNU6ATAC39P-201ENST00000516309 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
RNU6ATAC39P-201ENST00000516309 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 MYT1Q01538 1121 aa11.82□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
RNU6ATAC39P-201ENST00000516309 PROM2Q8N271 834 aa11.75□□□□□ -0.53
RNU6ATAC39P-201ENST00000516309 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
RNU6ATAC39P-201ENST00000516309 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
RNU6ATAC39P-201ENST00000516309 RGL2O15211 777 aa11.61□□□□□ -0.55
RNU6ATAC39P-201ENST00000516309 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 DSG3P32926 999 aa11.54□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
RNU6ATAC39P-201ENST00000516309 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
RNU6ATAC39P-201ENST00000516309 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
RNU6ATAC39P-201ENST00000516309 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
RNU6ATAC39P-201ENST00000516309 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
RNU6ATAC39P-201ENST00000516309 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
RNU6ATAC39P-201ENST00000516309 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms