RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 CHIC1Q5VXU3 224 aa13.88□□□□□ -0.19
RNU6-27P-201ENST00000516146 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
RNU6-27P-201ENST00000516146 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
RNU6-27P-201ENST00000516146 SENP3Q9H4L4 574 aaPredicted RBP11.59□□□□□ -0.55
RNU6-27P-201ENST00000516146 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
RNU6-27P-201ENST00000516146 ADRA2BP18089 450 aa10.7□□□□□ -0.7
RNU6-27P-201ENST00000516146 FOXD1Q16676 465 aa10.62□□□□□ -0.71
RNU6-27P-201ENST00000516146 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
RNU6-27P-201ENST00000516146 KCNA4P22459 653 aa10.52□□□□□ -0.73
RNU6-27P-201ENST00000516146 EHMT2Q96KQ7 1210 aa10.45□□□□□ -0.74
RNU6-27P-201ENST00000516146 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.77
RNU6-27P-201ENST00000516146 PIAS4Q8N2W9 510 aaPredicted RBP10.19□□□□□ -0.78
RNU6-27P-201ENST00000516146 SLC4A1APQ9BWU0 796 aaKnown RBP10.16□□□□□ -0.78
RNU6-27P-201ENST00000516146 NCBP3Q53F19 620 aaKnown RBP10.15□□□□□ -0.78
RNU6-27P-201ENST00000516146 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
RNU6-27P-201ENST00000516146 NPM3O75607 178 aaKnown RBP9.92□□□□□ -0.82
RNU6-27P-201ENST00000516146 SCAF1Q9H7N4 1312 aaKnown RBP9.83□□□□□ -0.84
RNU6-27P-201ENST00000516146 CNKSR2Q8WXI2 1034 aa9.83□□□□□ -0.84
RNU6-27P-201ENST00000516146 MSH5O43196 834 aa9.68□□□□□ -0.86
RNU6-27P-201ENST00000516146 ZBTB22O15209 634 aa9.66□□□□□ -0.86
RNU6-27P-201ENST00000516146 FOXD4L1Q9NU39 408 aa9.6□□□□□ -0.87
RNU6-27P-201ENST00000516146 DNAJC5BQ9UF47 199 aa9.58□□□□□ -0.88
RNU6-27P-201ENST00000516146 RNF216Q9NWF9 866 aaPredicted RBP9.5□□□□□ -0.89
RNU6-27P-201ENST00000516146 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
RNU6-27P-201ENST00000516146 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
RNU6-27P-201ENST00000516146 HOXD11P31277 338 aaPredicted RBP9.31□□□□□ -0.92
RNU6-27P-201ENST00000516146 DMRT2Q9Y5R5 561 aa9.3□□□□□ -0.92
RNU6-27P-201ENST00000516146 AMER1Q5JTC6 1135 aaPredicted RBP9.25□□□□□ -0.93
RNU6-27P-201ENST00000516146 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
RNU6-27P-201ENST00000516146 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
RNU6-27P-201ENST00000516146 MYCNP04198 464 aaPredicted RBP9.21□□□□□ -0.94
RNU6-27P-201ENST00000516146 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
RNU6-27P-201ENST00000516146 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
RNU6-27P-201ENST00000516146 FKBP8Q14318 412 aa9.1□□□□□ -0.95
RNU6-27P-201ENST00000516146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.94□□□□□ -0.98
RNU6-27P-201ENST00000516146 HNRNPUL2Q1KMD3 747 aaKnown RBP8.94□□□□□ -0.98
RNU6-27P-201ENST00000516146 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
RNU6-27P-201ENST00000516146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.91□□□□□ -0.98
RNU6-27P-201ENST00000516146 DCAF8L1A6NGE4 600 aa8.9□□□□□ -0.98
RNU6-27P-201ENST00000516146 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
RNU6-27P-201ENST00000516146 U3KPZ7 1027 aaPredicted RBP8.78□□□□□ -1
RNU6-27P-201ENST00000516146 APLP2Q06481 763 aa8.76□□□□□ -1.01
RNU6-27P-201ENST00000516146 ZNF219Q9P2Y4 722 aaPredicted RBP8.7□□□□□ -1.02
RNU6-27P-201ENST00000516146 FBXO3Q9UK99 471 aa8.7□□□□□ -1.02
RNU6-27P-201ENST00000516146 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
RNU6-27P-201ENST00000516146 FBLN2P98095 1184 aa8.55□□□□□ -1.04
RNU6-27P-201ENST00000516146 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
RNU6-27P-201ENST00000516146 PROM2Q8N271 834 aa8.51□□□□□ -1.05
RNU6-27P-201ENST00000516146 MKRN4PQ13434 485 aaPredicted RBP8.49□□□□□ -1.05
RNU6-27P-201ENST00000516146 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
RNU6-27P-201ENST00000516146 DCAF8L2P0C7V8 631 aa8.44□□□□□ -1.06
RNU6-27P-201ENST00000516146 TRHP20396 242 aaPredicted RBP8.43□□□□□ -1.06
RNU6-27P-201ENST00000516146 POLA2Q14181 598 aa8.4□□□□□ -1.06
RNU6-27P-201ENST00000516146 IFNLR1Q8IU57 520 aaPredicted RBP8.4□□□□□ -1.06
RNU6-27P-201ENST00000516146 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
RNU6-27P-201ENST00000516146 ZBTB12Q9Y330 459 aaPredicted RBP8.38□□□□□ -1.07
RNU6-27P-201ENST00000516146 CAPN15O75808 1086 aa8.36□□□□□ -1.07
RNU6-27P-201ENST00000516146 SPINK5Q9NQ38 1064 aaPredicted RBP8.36□□□□□ -1.07
RNU6-27P-201ENST00000516146 PKD2Q13563 968 aa8.31□□□□□ -1.08
RNU6-27P-201ENST00000516146 BCANQ96GW7 911 aa8.29□□□□□ -1.08
RNU6-27P-201ENST00000516146 RNF39Q9H2S5 420 aa8.29□□□□□ -1.08
RNU6-27P-201ENST00000516146 KLHL34Q8N239 644 aa8.28□□□□□ -1.08
RNU6-27P-201ENST00000516146 VSIG10Q8N0Z9 540 aa8.27□□□□□ -1.09
RNU6-27P-201ENST00000516146 SPOCK2Q92563 424 aa8.27□□□□□ -1.09
RNU6-27P-201ENST00000516146 C1QBPQ07021 282 aaKnown RBP8.26□□□□□ -1.09
RNU6-27P-201ENST00000516146 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
RNU6-27P-201ENST00000516146 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
RNU6-27P-201ENST00000516146 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
RNU6-27P-201ENST00000516146 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
RNU6-27P-201ENST00000516146 ABCB7O75027 752 aa8.21□□□□□ -1.1
RNU6-27P-201ENST00000516146 PLCD3Q8N3E9 789 aa8.19□□□□□ -1.1
RNU6-27P-201ENST00000516146 ZNF692Q9BU19 519 aaPredicted RBP8.19□□□□□ -1.1
RNU6-27P-201ENST00000516146 SPDYE2BA6NHP3 402 aa8.15□□□□□ -1.1
RNU6-27P-201ENST00000516146 SPDYE6P0CI01 402 aa8.15□□□□□ -1.1
RNU6-27P-201ENST00000516146 SPDYE2Q495Y8 402 aa8.15□□□□□ -1.1
RNU6-27P-201ENST00000516146 PAXIP1Q6ZW49 1069 aaPredicted RBP8.14□□□□□ -1.11
RNU6-27P-201ENST00000516146 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
RNU6-27P-201ENST00000516146 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
RNU6-27P-201ENST00000516146 MIER1Q8N108 512 aa8.12□□□□□ -1.11
RNU6-27P-201ENST00000516146 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
RNU6-27P-201ENST00000516146 SSUH2Q9Y2M2 353 aa8.12□□□□□ -1.11
RNU6-27P-201ENST00000516146 ZBTB47Q9UFB7 747 aaPredicted RBP8.11□□□□□ -1.11
RNU6-27P-201ENST00000516146 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-27P-201ENST00000516146 PABPN1Q86U42 306 aaKnown RBP eCLIP8.09□□□□□ -1.11
RNU6-27P-201ENST00000516146 OSCARQ8IYS5 282 aa8.09□□□□□ -1.11
RNU6-27P-201ENST00000516146 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
RNU6-27P-201ENST00000516146 RGL2O15211 777 aa8.08□□□□□ -1.12
RNU6-27P-201ENST00000516146 DSG3P32926 999 aa8.06□□□□□ -1.12
RNU6-27P-201ENST00000516146 KDM2AQ9Y2K7 1162 aa8.06□□□□□ -1.12
RNU6-27P-201ENST00000516146 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
RNU6-27P-201ENST00000516146 CIZ1Q9ULV3 898 aaPredicted RBP8.05□□□□□ -1.12
RNU6-27P-201ENST00000516146 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
RNU6-27P-201ENST00000516146 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
RNU6-27P-201ENST00000516146 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
RNU6-27P-201ENST00000516146 TSHZ2Q9NRE2 1034 aa7.98□□□□□ -1.13
RNU6-27P-201ENST00000516146 GSE1Q14687 1217 aa7.94□□□□□ -1.14
RNU6-27P-201ENST00000516146 HS6ST3Q8IZP7 471 aa7.94□□□□□ -1.14
RNU6-27P-201ENST00000516146 NBR1Q14596 966 aa7.93□□□□□ -1.14
RNU6-27P-201ENST00000516146 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
RNU6-27P-201ENST00000516146 RIOK3O14730 519 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms