RNA–Protein interactions for RNA: ENST00000511481.5

SEC24D-211, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24D, Length 2,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-211ENST00000511481 CHIC1Q5VXU3 224 aa15.98■□□□□ 0.15
SEC24D-211ENST00000511481 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
SEC24D-211ENST00000511481 PHF23Q9BUL5 403 aaPredicted RBP14.18□□□□□ -0.14
SEC24D-211ENST00000511481 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
SEC24D-211ENST00000511481 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
SEC24D-211ENST00000511481 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
SEC24D-211ENST00000511481 KCNA4P22459 653 aa12.66□□□□□ -0.38
SEC24D-211ENST00000511481 ADRA2BP18089 450 aa12.51□□□□□ -0.41
SEC24D-211ENST00000511481 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
SEC24D-211ENST00000511481 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
SEC24D-211ENST00000511481 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
SEC24D-211ENST00000511481 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
SEC24D-211ENST00000511481 FOXD1Q16676 465 aa11.93□□□□□ -0.5
SEC24D-211ENST00000511481 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
SEC24D-211ENST00000511481 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
SEC24D-211ENST00000511481 RTN4Q9NQC3 1192 aaKnown RBP11.72□□□□□ -0.53
SEC24D-211ENST00000511481 ZBTB22O15209 634 aa11.7□□□□□ -0.54
SEC24D-211ENST00000511481 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
SEC24D-211ENST00000511481 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
SEC24D-211ENST00000511481 PIAS4Q8N2W9 510 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-211ENST00000511481 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
SEC24D-211ENST00000511481 CNKSR2Q8WXI2 1034 aa11.35□□□□□ -0.59
SEC24D-211ENST00000511481 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
SEC24D-211ENST00000511481 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
SEC24D-211ENST00000511481 FKBP8Q14318 412 aa11.07□□□□□ -0.64
SEC24D-211ENST00000511481 RNF216Q9NWF9 866 aaPredicted RBP10.92□□□□□ -0.66
SEC24D-211ENST00000511481 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
SEC24D-211ENST00000511481 SLC4A2P04920 1241 aa10.83□□□□□ -0.68
SEC24D-211ENST00000511481 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
SEC24D-211ENST00000511481 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
SEC24D-211ENST00000511481 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
SEC24D-211ENST00000511481 HOXD11P31277 338 aaPredicted RBP10.65□□□□□ -0.71
SEC24D-211ENST00000511481 MSH5O43196 834 aa10.62□□□□□ -0.71
SEC24D-211ENST00000511481 BCANQ96GW7 911 aa10.61□□□□□ -0.71
SEC24D-211ENST00000511481 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
SEC24D-211ENST00000511481 HAP1P54257 671 aaPredicted RBP10.55□□□□□ -0.72
SEC24D-211ENST00000511481 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
SEC24D-211ENST00000511481 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
SEC24D-211ENST00000511481 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
SEC24D-211ENST00000511481 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
SEC24D-211ENST00000511481 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
SEC24D-211ENST00000511481 TPRNQ4KMQ1 711 aa10.35□□□□□ -0.75
SEC24D-211ENST00000511481 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
SEC24D-211ENST00000511481 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
SEC24D-211ENST00000511481 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
SEC24D-211ENST00000511481 PKD2Q13563 968 aa10.24□□□□□ -0.77
SEC24D-211ENST00000511481 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
SEC24D-211ENST00000511481 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
SEC24D-211ENST00000511481 PROM2Q8N271 834 aa10.22□□□□□ -0.77
SEC24D-211ENST00000511481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.77
SEC24D-211ENST00000511481 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.77
SEC24D-211ENST00000511481 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
SEC24D-211ENST00000511481 FBLN2P98095 1184 aa10.19□□□□□ -0.78
SEC24D-211ENST00000511481 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
SEC24D-211ENST00000511481 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
SEC24D-211ENST00000511481 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
SEC24D-211ENST00000511481 TIMELESSQ9UNS1 1208 aa10.1□□□□□ -0.79
SEC24D-211ENST00000511481 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
SEC24D-211ENST00000511481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.796e-7■■■□□ 16.6
SEC24D-211ENST00000511481 U3KPZ7 1027 aaPredicted RBP10.08□□□□□ -0.8
SEC24D-211ENST00000511481 NPM1P06748 294 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEC24D-211ENST00000511481 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
SEC24D-211ENST00000511481 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
SEC24D-211ENST00000511481 DAXXQ9UER7 740 aaPredicted RBP10.03□□□□□ -0.8
SEC24D-211ENST00000511481 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
SEC24D-211ENST00000511481 ARXQ96QS3 562 aa10□□□□□ -0.81
SEC24D-211ENST00000511481 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
SEC24D-211ENST00000511481 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
SEC24D-211ENST00000511481 SPRYD3Q8NCJ5 442 aa9.95□□□□□ -0.82
SEC24D-211ENST00000511481 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
SEC24D-211ENST00000511481 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
SEC24D-211ENST00000511481 SPOCK2Q92563 424 aa9.91□□□□□ -0.82
SEC24D-211ENST00000511481 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.82
SEC24D-211ENST00000511481 NBR1Q14596 966 aa9.89□□□□□ -0.83
SEC24D-211ENST00000511481 ERICH6Q7L0X2 663 aa9.89□□□□□ -0.83
SEC24D-211ENST00000511481 RGL2O15211 777 aa9.87□□□□□ -0.83
SEC24D-211ENST00000511481 APLP2Q06481 763 aa9.87□□□□□ -0.83
SEC24D-211ENST00000511481 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
SEC24D-211ENST00000511481 TMEM132AQ24JP5 1023 aa9.76□□□□□ -0.85
SEC24D-211ENST00000511481 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
SEC24D-211ENST00000511481 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
SEC24D-211ENST00000511481 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
SEC24D-211ENST00000511481 POLA2Q14181 598 aa9.65□□□□□ -0.86
SEC24D-211ENST00000511481 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.86
SEC24D-211ENST00000511481 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
SEC24D-211ENST00000511481 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
SEC24D-211ENST00000511481 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
SEC24D-211ENST00000511481 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
SEC24D-211ENST00000511481 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
SEC24D-211ENST00000511481 MIER1Q8N108 512 aa9.55□□□□□ -0.88
SEC24D-211ENST00000511481 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
SEC24D-211ENST00000511481 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
SEC24D-211ENST00000511481 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.88
SEC24D-211ENST00000511481 POTEDQ86YR6 584 aa9.52□□□□□ -0.89
SEC24D-211ENST00000511481 GTPBP6O43824 516 aaPredicted RBP9.51□□□□□ -0.89
SEC24D-211ENST00000511481 RNF25Q96BH1 459 aaPredicted RBP9.5□□□□□ -0.89
SEC24D-211ENST00000511481 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
SEC24D-211ENST00000511481 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
SEC24D-211ENST00000511481 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
SEC24D-211ENST00000511481 CAPN15O75808 1086 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms