RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 AEBP2Q6ZN18 517 aaPredicted RBP37.6■■■■□ 3.61
LIN54-205ENST00000505905 CHIC1Q5VXU3 224 aa35.76■■■■□ 3.32
LIN54-205ENST00000505905 SENP3Q9H4L4 574 aaPredicted RBP31.94■■■□□ 2.7
LIN54-205ENST00000505905 PHF23Q9BUL5 403 aaPredicted RBP31.57■■■□□ 2.64
LIN54-205ENST00000505905 FOXD1Q16676 465 aa29.82■■■□□ 2.36
LIN54-205ENST00000505905 PLPPR3Q6T4P5 718 aa28.55■■■□□ 2.16
LIN54-205ENST00000505905 PPP6R1Q9UPN7 881 aa28.01■■■□□ 2.07
LIN54-205ENST00000505905 ADRA2BP18089 450 aa27.88■■■□□ 2.05
LIN54-205ENST00000505905 PIAS4Q8N2W9 510 aaPredicted RBP27.82■■■□□ 2.04
LIN54-205ENST00000505905 MSH5O43196 834 aa27.77■■■□□ 2.04
LIN54-205ENST00000505905 POTEDQ86YR6 584 aa26.99■■□□□ 1.91
LIN54-205ENST00000505905 MAPK8IP2Q13387 824 aaPredicted RBP25.59■■□□□ 1.69
LIN54-205ENST00000505905 DMRT2Q9Y5R5 561 aa25.39■■□□□ 1.66
LIN54-205ENST00000505905 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
LIN54-205ENST00000505905 PPP4R3CPQ6ZMV5 832 aa25.07■■□□□ 1.6
LIN54-205ENST00000505905 CNKSR2Q8WXI2 1034 aa24.55■■□□□ 1.52
LIN54-205ENST00000505905 HOXD11P31277 338 aaPredicted RBP24.52■■□□□ 1.52
LIN54-205ENST00000505905 RNF216Q9NWF9 866 aaPredicted RBP24.32■■□□□ 1.48
LIN54-205ENST00000505905 DCAF8L1A6NGE4 600 aa24.2■■□□□ 1.46
LIN54-205ENST00000505905 NCBP3Q53F19 620 aaKnown RBP24.06■■□□□ 1.44
LIN54-205ENST00000505905 NPM3O75607 178 aaKnown RBP23.82■■□□□ 1.4
LIN54-205ENST00000505905 RNF39Q9H2S5 420 aa23.79■■□□□ 1.4
LIN54-205ENST00000505905 CACNB1Q02641 598 aaPredicted RBP23.74■■□□□ 1.39
LIN54-205ENST00000505905 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
LIN54-205ENST00000505905 KCNA4P22459 653 aa23.48■■□□□ 1.35
LIN54-205ENST00000505905 C1QBPQ07021 282 aaKnown RBP23.39■■□□□ 1.33
LIN54-205ENST00000505905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
LIN54-205ENST00000505905 U3KPZ7 1027 aaPredicted RBP22.88■■□□□ 1.25
LIN54-205ENST00000505905 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
LIN54-205ENST00000505905 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
LIN54-205ENST00000505905 CAPN15O75808 1086 aa22.36■■□□□ 1.17
LIN54-205ENST00000505905 DSG3P32926 999 aa22.3■■□□□ 1.16
LIN54-205ENST00000505905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
LIN54-205ENST00000505905 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
LIN54-205ENST00000505905 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
LIN54-205ENST00000505905 APLP2Q06481 763 aa22.08■■□□□ 1.13
LIN54-205ENST00000505905 SAMD1Q6SPF0 538 aaPredicted RBP22.06■■□□□ 1.12
LIN54-205ENST00000505905 TRHP20396 242 aaPredicted RBP22.03■■□□□ 1.12
LIN54-205ENST00000505905 ZNF219Q9P2Y4 722 aaPredicted RBP22■■□□□ 1.11
LIN54-205ENST00000505905 MYCNP04198 464 aaPredicted RBP21.97■■□□□ 1.11
LIN54-205ENST00000505905 ABCB7O75027 752 aa21.9■■□□□ 1.1
LIN54-205ENST00000505905 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
LIN54-205ENST00000505905 ZBTB22O15209 634 aa21.66■■□□□ 1.06
LIN54-205ENST00000505905 ATF5Q9Y2D1 282 aaPredicted RBP21.56■■□□□ 1.04
LIN54-205ENST00000505905 POLA2Q14181 598 aa21.51■■□□□ 1.03
LIN54-205ENST00000505905 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
LIN54-205ENST00000505905 ATXN8OSP0DMR3 200 aa21.14■□□□□ 0.97
LIN54-205ENST00000505905 POTEHQ6S545 545 aa21.13■□□□□ 0.97
LIN54-205ENST00000505905 ZBTB12Q9Y330 459 aaPredicted RBP21.03■□□□□ 0.96
LIN54-205ENST00000505905 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
LIN54-205ENST00000505905 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
LIN54-205ENST00000505905 CHRDL2Q6WN34 429 aa20.73■□□□□ 0.91
LIN54-205ENST00000505905 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
LIN54-205ENST00000505905 REM2Q8IYK8 340 aaPredicted RBP20.6■□□□□ 0.89
LIN54-205ENST00000505905 MKRN4PQ13434 485 aaPredicted RBP20.59■□□□□ 0.89
LIN54-205ENST00000505905 FBLN2P98095 1184 aa20.55■□□□□ 0.88
LIN54-205ENST00000505905 SPDYE2BA6NHP3 402 aa20.44■□□□□ 0.86
LIN54-205ENST00000505905 SPDYE6P0CI01 402 aa20.44■□□□□ 0.86
LIN54-205ENST00000505905 SPDYE2Q495Y8 402 aa20.44■□□□□ 0.86
LIN54-205ENST00000505905 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
LIN54-205ENST00000505905 PITPNM1O00562 1244 aa20.39■□□□□ 0.85
LIN54-205ENST00000505905 PIP4P2Q8N4L2 257 aa20.29■□□□□ 0.84
LIN54-205ENST00000505905 SSUH2Q9Y2M2 353 aa20.26■□□□□ 0.83
LIN54-205ENST00000505905 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.82
LIN54-205ENST00000505905 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
LIN54-205ENST00000505905 SPDYE1Q8NFV5 336 aaPredicted RBP20.03■□□□□ 0.8
LIN54-205ENST00000505905 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
LIN54-205ENST00000505905 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
LIN54-205ENST00000505905 SP7Q8TDD2 431 aaPredicted RBP19.87■□□□□ 0.77
LIN54-205ENST00000505905 PRKAR2AP13861 404 aaKnown RBP19.81■□□□□ 0.76
LIN54-205ENST00000505905 HAX1O00165 279 aa19.8■□□□□ 0.76
LIN54-205ENST00000505905 EVX2Q03828 476 aa19.71■□□□□ 0.75
LIN54-205ENST00000505905 PRR29P0C7W0 189 aa19.65■□□□□ 0.74
LIN54-205ENST00000505905 CHADLQ6NUI6 762 aa19.63■□□□□ 0.73
LIN54-205ENST00000505905 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
LIN54-205ENST00000505905 C19orf67A6NJJ6 358 aa19.55■□□□□ 0.72
LIN54-205ENST00000505905 FARP1Q9Y4F1 1045 aaPredicted RBP19.36■□□□□ 0.69
LIN54-205ENST00000505905 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
LIN54-205ENST00000505905 CREBZFQ9NS37 354 aa19.3■□□□□ 0.68
LIN54-205ENST00000505905 PROM2Q8N271 834 aa19.24■□□□□ 0.67
LIN54-205ENST00000505905 GABBR2O75899 941 aa19.2■□□□□ 0.66
LIN54-205ENST00000505905 CD44P16070 742 aaKnown RBP19.19■□□□□ 0.66
LIN54-205ENST00000505905 MNX1P50219 401 aaPredicted RBP19.03■□□□□ 0.64
LIN54-205ENST00000505905 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
LIN54-205ENST00000505905 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
LIN54-205ENST00000505905 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
LIN54-205ENST00000505905 CLCN6P51797 869 aa18.87■□□□□ 0.61
LIN54-205ENST00000505905 NPM1P06748 294 aaKnown RBP eCLIP18.82■□□□□ 0.6
LIN54-205ENST00000505905 PHF12Q96QT6 1004 aa18.73■□□□□ 0.59
LIN54-205ENST00000505905 GALR2O43603 387 aaPredicted RBP18.71■□□□□ 0.59
LIN54-205ENST00000505905 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
LIN54-205ENST00000505905 FKBP8Q14318 412 aa18.7■□□□□ 0.58
LIN54-205ENST00000505905 LHX8Q68G74 356 aa18.62■□□□□ 0.57
LIN54-205ENST00000505905 DCBLD2Q96PD2 775 aa18.62■□□□□ 0.57
LIN54-205ENST00000505905 MIER1Q8N108 512 aa18.6■□□□□ 0.57
LIN54-205ENST00000505905 TSPYL2Q9H2G4 693 aaPredicted RBP18.52■□□□□ 0.56
LIN54-205ENST00000505905 CCDC61Q9Y6R9 512 aa18.52■□□□□ 0.56
LIN54-205ENST00000505905 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
LIN54-205ENST00000505905 MS4A3Q96HJ5 214 aa18.48■□□□□ 0.55
LIN54-205ENST00000505905 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms