RNA–Protein interactions for RNA: ENST00000505905.1
LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, human
Retrieved 5 of 5 RNA–protein pairs in 3.9 ms
LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, human![human](/images/species-human.png)
TSL 2
Gene LIN54, Length 810 nt, Biotype processed transcript.
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
LIN54-205 | ENST00000505905 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 10.99 | □□□□□ -0.65 | 2e-9 | ■■■■■ 223.6 |
LIN54-205 | ENST00000505905 | PUM2 | Q8TB72 | 1066 aa | Known RBP eCLIP | 8 | □□□□□ -1.13 | 2e-8 | ■■■■■ 39.1 |
LIN54-205 | ENST00000505905 | PUM1 | Q14671 | 1186 aa | Known RBP eCLIP | 8.56 | □□□□□ -1.04 | 9e-8 | ■■■■■ 32.1 |
LIN54-205 | ENST00000505905 | FUBP3 | Q96I24 | 572 aa | Known RBP eCLIP | 6.95 | □□□□□ -1.3 | 4e-12 | ■■■■■ 27.5 |
LIN54-205 | ENST00000505905 | KHSRP | Q92945 | 711 aa | Known RBP eCLIP | 16.36 | ■□□□□ 0.21 | 5e-6 | ■■■□□ 19 |