RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 PLCD3Q8N3E9 789 aa18.46■□□□□ 0.55
LIN54-205ENST00000505905 KIF12Q96FN5 646 aa18.39■□□□□ 0.53
LIN54-205ENST00000505905 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
LIN54-205ENST00000505905 NUBP1P53384 320 aa18.34■□□□□ 0.53
LIN54-205ENST00000505905 ASTLQ6HA08 431 aaPredicted RBP18.34■□□□□ 0.53
LIN54-205ENST00000505905 ATMINO43313 823 aaPredicted RBP18.3■□□□□ 0.52
LIN54-205ENST00000505905 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
LIN54-205ENST00000505905 MAP3K13O43283 966 aa18.27■□□□□ 0.52
LIN54-205ENST00000505905 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
LIN54-205ENST00000505905 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
LIN54-205ENST00000505905 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
LIN54-205ENST00000505905 ATN1P54259 1190 aaPredicted RBP18.16■□□□□ 0.5
LIN54-205ENST00000505905 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
LIN54-205ENST00000505905 METRNQ9UJH8 293 aa18.15■□□□□ 0.5
LIN54-205ENST00000505905 SLC39A7Q92504 469 aa18.13■□□□□ 0.49
LIN54-205ENST00000505905 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
LIN54-205ENST00000505905 C7P10643 843 aa18.11■□□□□ 0.49
LIN54-205ENST00000505905 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
LIN54-205ENST00000505905 FAM212AQ96EL1 285 aa18.1■□□□□ 0.49
LIN54-205ENST00000505905 TIE1P35590 1138 aa18.09■□□□□ 0.49
LIN54-205ENST00000505905 SGIP1Q9BQI5 828 aa18.08■□□□□ 0.48
LIN54-205ENST00000505905 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
LIN54-205ENST00000505905 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
LIN54-205ENST00000505905 TTLL13PA6NNM8 815 aa18.02■□□□□ 0.48
LIN54-205ENST00000505905 IFNL1Q8IU54 200 aa18.01■□□□□ 0.47
LIN54-205ENST00000505905 POTEFA5A3E0 1075 aa18■□□□□ 0.47
LIN54-205ENST00000505905 DCAF8Q5TAQ9 597 aa17.94■□□□□ 0.46
LIN54-205ENST00000505905 PYGBP11216 843 aa17.89■□□□□ 0.45
LIN54-205ENST00000505905 KLHL34Q8N239 644 aa17.88■□□□□ 0.45
LIN54-205ENST00000505905 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
LIN54-205ENST00000505905 COLQQ9Y215 455 aaPredicted RBP17.87■□□□□ 0.45
LIN54-205ENST00000505905 TMEM106CQ9BVX2 250 aa17.83■□□□□ 0.44
LIN54-205ENST00000505905 IER5LQ5T953 404 aa17.81■□□□□ 0.44
LIN54-205ENST00000505905 IFNLR1Q8IU57 520 aaPredicted RBP17.81■□□□□ 0.44
LIN54-205ENST00000505905 MAMSTRQ6ZN01 415 aa17.78■□□□□ 0.44
LIN54-205ENST00000505905 GSE1Q14687 1217 aa17.77■□□□□ 0.44
LIN54-205ENST00000505905 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
LIN54-205ENST00000505905 SEC24BO95487 1268 aa17.72■□□□□ 0.43
LIN54-205ENST00000505905 CHRM1P11229 460 aaPredicted RBP17.71■□□□□ 0.43
LIN54-205ENST00000505905 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
LIN54-205ENST00000505905 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
LIN54-205ENST00000505905 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
LIN54-205ENST00000505905 ZNF467Q7Z7K2 595 aaPredicted RBP17.62■□□□□ 0.41
LIN54-205ENST00000505905 LCE2DQ5TA82 110 aaPredicted RBP17.57■□□□□ 0.4
LIN54-205ENST00000505905 PLCG2P16885 1265 aa17.56■□□□□ 0.4
LIN54-205ENST00000505905 OCEL1Q9H607 264 aa17.52■□□□□ 0.4
LIN54-205ENST00000505905 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
LIN54-205ENST00000505905 POTEMA6NI47 508 aa17.5■□□□□ 0.39
LIN54-205ENST00000505905 PSEN1P49768 467 aa17.49■□□□□ 0.39
LIN54-205ENST00000505905 POTEGQ6S5H5 508 aa17.48■□□□□ 0.39
LIN54-205ENST00000505905 PDCD7Q8N8D1 485 aaKnown RBP17.44■□□□□ 0.38
LIN54-205ENST00000505905 PDAP1Q13442 181 aaKnown RBP17.42■□□□□ 0.38
LIN54-205ENST00000505905 FAM163AQ96GL9 167 aaPredicted RBP17.41■□□□□ 0.38
LIN54-205ENST00000505905 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
LIN54-205ENST00000505905 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
LIN54-205ENST00000505905 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
LIN54-205ENST00000505905 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
LIN54-205ENST00000505905 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
LIN54-205ENST00000505905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIN54-205ENST00000505905 CABP2Q9NPB3 220 aa17.26■□□□□ 0.35
LIN54-205ENST00000505905 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
LIN54-205ENST00000505905 RNF25Q96BH1 459 aaPredicted RBP17.22■□□□□ 0.35
LIN54-205ENST00000505905 PLSCR2Q9NRY7 297 aa17.22■□□□□ 0.35
LIN54-205ENST00000505905 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
LIN54-205ENST00000505905 ST18O60284 1047 aa17.19■□□□□ 0.34
LIN54-205ENST00000505905 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
LIN54-205ENST00000505905 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
LIN54-205ENST00000505905 RIOK3O14730 519 aaKnown RBP17.12■□□□□ 0.33
LIN54-205ENST00000505905 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
LIN54-205ENST00000505905 EFCAB3Q8N7B9 438 aa17.1■□□□□ 0.33
LIN54-205ENST00000505905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
LIN54-205ENST00000505905 SNPHO15079 494 aa17.04■□□□□ 0.32
LIN54-205ENST00000505905 ZFP91Q96JP5 570 aaPredicted RBP17.04■□□□□ 0.32
LIN54-205ENST00000505905 BOLA1Q9Y3E2 137 aa17.04■□□□□ 0.32
LIN54-205ENST00000505905 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
LIN54-205ENST00000505905 TMEM121BQ9BXQ6 578 aaPredicted RBP17■□□□□ 0.31
LIN54-205ENST00000505905 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
LIN54-205ENST00000505905 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
LIN54-205ENST00000505905 SOX12O15370 315 aa16.92■□□□□ 0.3
LIN54-205ENST00000505905 MARVELD3Q96A59 401 aa16.9■□□□□ 0.3
LIN54-205ENST00000505905 G3V3G9 751 aa16.89■□□□□ 0.29
LIN54-205ENST00000505905 PKD2Q13563 968 aa16.88■□□□□ 0.29
LIN54-205ENST00000505905 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
LIN54-205ENST00000505905 HOXB3P14651 431 aaPredicted RBP16.86■□□□□ 0.29
LIN54-205ENST00000505905 MICALL2Q8IY33 904 aa16.85■□□□□ 0.29
LIN54-205ENST00000505905 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
LIN54-205ENST00000505905 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
LIN54-205ENST00000505905 TMEM92Q6UXU6 159 aa16.82■□□□□ 0.28
LIN54-205ENST00000505905 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
LIN54-205ENST00000505905 RGL2O15211 777 aa16.78■□□□□ 0.28
LIN54-205ENST00000505905 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.28
LIN54-205ENST00000505905 EMP3P54852 163 aa16.76■□□□□ 0.27
LIN54-205ENST00000505905 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 STK24Q9Y6E0 443 aa16.75■□□□□ 0.27
LIN54-205ENST00000505905 NLRP6P59044 892 aa16.72■□□□□ 0.27
LIN54-205ENST00000505905 MFRPQ9BY79 579 aa16.72■□□□□ 0.27
LIN54-205ENST00000505905 STK25O00506 426 aa16.71■□□□□ 0.27
LIN54-205ENST00000505905 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
LIN54-205ENST00000505905 HOXB1P14653 301 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms