RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
SUB1-202ENST00000502453 CHIC1Q5VXU3 224 aa9.89□□□□□ -0.83
SUB1-202ENST00000502453 PHF23Q9BUL5 403 aaPredicted RBP8.93□□□□□ -0.98
SUB1-202ENST00000502453 EHMT2Q96KQ7 1210 aa8.23□□□□□ -1.09
SUB1-202ENST00000502453 SLC24A1O60721 1099 aa8.22□□□□□ -1.09
SUB1-202ENST00000502453 SENP3Q9H4L4 574 aaPredicted RBP8.2□□□□□ -1.1
SUB1-202ENST00000502453 PLPPR3Q6T4P5 718 aa8.07□□□□□ -1.12
SUB1-202ENST00000502453 ADRA2BP18089 450 aa7.89□□□□□ -1.15
SUB1-202ENST00000502453 PPP6R1Q9UPN7 881 aa7.84□□□□□ -1.15
SUB1-202ENST00000502453 FOXD1Q16676 465 aa7.78□□□□□ -1.16
SUB1-202ENST00000502453 RTN4Q9NQC3 1192 aaKnown RBP7.65□□□□□ -1.18
SUB1-202ENST00000502453 KCNA4P22459 653 aa7.63□□□□□ -1.19
SUB1-202ENST00000502453 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
SUB1-202ENST00000502453 AMER1Q5JTC6 1135 aaPredicted RBP7.49□□□□□ -1.21
SUB1-202ENST00000502453 SLC4A1APQ9BWU0 796 aaKnown RBP7.37□□□□□ -1.23
SUB1-202ENST00000502453 PIAS4Q8N2W9 510 aaPredicted RBP7.35□□□□□ -1.23
SUB1-202ENST00000502453 NCBP3Q53F19 620 aaKnown RBP7.31□□□□□ -1.24
SUB1-202ENST00000502453 PRKCSHP14314 528 aaPredicted RBP7.24□□□□□ -1.25
SUB1-202ENST00000502453 PPP4R3CPQ6ZMV5 832 aa7.24□□□□□ -1.25
SUB1-202ENST00000502453 DAXXQ9UER7 740 aaPredicted RBP7.19□□□□□ -1.26
SUB1-202ENST00000502453 NPM3O75607 178 aaKnown RBP7.1□□□□□ -1.27
SUB1-202ENST00000502453 MAPK8IP2Q13387 824 aaPredicted RBP7.05□□□□□ -1.28
SUB1-202ENST00000502453 ZBTB22O15209 634 aa7.05□□□□□ -1.28
SUB1-202ENST00000502453 TAOK2Q9UL54 1235 aa7□□□□□ -1.29
SUB1-202ENST00000502453 BCANQ96GW7 911 aa6.98□□□□□ -1.29
SUB1-202ENST00000502453 TIMELESSQ9UNS1 1208 aa6.96□□□□□ -1.3
SUB1-202ENST00000502453 TPRNQ4KMQ1 711 aa6.95□□□□□ -1.3
SUB1-202ENST00000502453 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
SUB1-202ENST00000502453 TULP1O00294 542 aaPredicted RBP6.94□□□□□ -1.3
SUB1-202ENST00000502453 ARXQ96QS3 562 aa6.91□□□□□ -1.3
SUB1-202ENST00000502453 PLCB2Q00722 1185 aa6.9□□□□□ -1.3
SUB1-202ENST00000502453 FKBP8Q14318 412 aa6.89□□□□□ -1.31
SUB1-202ENST00000502453 CNKSR2Q8WXI2 1034 aa6.88□□□□□ -1.31
SUB1-202ENST00000502453 MSH5O43196 834 aa6.8□□□□□ -1.32
SUB1-202ENST00000502453 DCAF8L2P0C7V8 631 aa6.78□□□□□ -1.32
SUB1-202ENST00000502453 RANGAP1P46060 587 aaPredicted RBP6.78□□□□□ -1.32
SUB1-202ENST00000502453 HOMEZQ8IX15 550 aa6.77□□□□□ -1.33
SUB1-202ENST00000502453 SCAF1Q9H7N4 1312 aaKnown RBP6.75□□□□□ -1.33
SUB1-202ENST00000502453 GTF3C3Q9Y5Q9 886 aa6.73□□□□□ -1.33
SUB1-202ENST00000502453 FOXD4L1Q9NU39 408 aa6.7□□□□□ -1.34
SUB1-202ENST00000502453 SLC4A2P04920 1241 aa6.69□□□□□ -1.34
SUB1-202ENST00000502453 APLP2Q06481 763 aa6.68□□□□□ -1.34
SUB1-202ENST00000502453 RNF216Q9NWF9 866 aaPredicted RBP6.68□□□□□ -1.34
SUB1-202ENST00000502453 PODXL2Q9NZ53 605 aa6.66□□□□□ -1.34
SUB1-202ENST00000502453 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
SUB1-202ENST00000502453 DMRT2Q9Y5R5 561 aa6.64□□□□□ -1.35
SUB1-202ENST00000502453 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
SUB1-202ENST00000502453 HOXD11P31277 338 aaPredicted RBP6.61□□□□□ -1.35
SUB1-202ENST00000502453 C14orf37Q86TY3 774 aa6.6□□□□□ -1.35
SUB1-202ENST00000502453 KDM2AQ9Y2K7 1162 aa6.6□□□□□ -1.35
SUB1-202ENST00000502453 FBLN2P98095 1184 aa6.59□□□□□ -1.35
SUB1-202ENST00000502453 DNAJC5BQ9UF47 199 aa6.59□□□□□ -1.36
SUB1-202ENST00000502453 ERICH6Q7L0X2 663 aa6.56□□□□□ -1.36
SUB1-202ENST00000502453 TMEM132AQ24JP5 1023 aa6.54□□□□□ -1.36
SUB1-202ENST00000502453 MYT1Q01538 1121 aa6.53□□□□□ -1.36
SUB1-202ENST00000502453 KLHL34Q8N239 644 aa6.53□□□□□ -1.36
SUB1-202ENST00000502453 ATF5Q9Y2D1 282 aaPredicted RBP6.51□□□□□ -1.37
SUB1-202ENST00000502453 SUPT5HO00267 1087 aaKnown RBP6.5□□□□□ -1.37
SUB1-202ENST00000502453 CFAP44Q96MT7 982 aa6.49□□□□□ -1.37
SUB1-202ENST00000502453 PELP1Q8IZL8 1130 aaKnown RBP6.48□□□□□ -1.37
SUB1-202ENST00000502453 PAXIP1Q6ZW49 1069 aaPredicted RBP6.47□□□□□ -1.37
SUB1-202ENST00000502453 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
SUB1-202ENST00000502453 NBR1Q14596 966 aa6.45□□□□□ -1.38
SUB1-202ENST00000502453 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.44□□□□□ -1.38
SUB1-202ENST00000502453 DCAF8L1A6NGE4 600 aa6.43□□□□□ -1.38
SUB1-202ENST00000502453 MYCNP04198 464 aaPredicted RBP6.39□□□□□ -1.39
SUB1-202ENST00000502453 TSHZ2Q9NRE2 1034 aa6.37□□□□□ -1.39
SUB1-202ENST00000502453 TRIM26Q12899 539 aaPredicted RBP6.37□□□□□ -1.39
SUB1-202ENST00000502453 UBTFP17480 764 aaKnown RBP6.34□□□□□ -1.39
SUB1-202ENST00000502453 U3KPZ7 1027 aaPredicted RBP6.34□□□□□ -1.39
SUB1-202ENST00000502453 BBXQ8WY36 941 aaPredicted RBP6.31□□□□□ -1.4
SUB1-202ENST00000502453 PKD2Q13563 968 aa6.3□□□□□ -1.4
SUB1-202ENST00000502453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.29□□□□□ -1.4
SUB1-202ENST00000502453 FBXO3Q9UK99 471 aa6.29□□□□□ -1.4
SUB1-202ENST00000502453 NPM1P06748 294 aaKnown RBP eCLIP6.28□□□□□ -1.4
SUB1-202ENST00000502453 ATXN8OSP0DMR3 200 aa6.27□□□□□ -1.41
SUB1-202ENST00000502453 SPRYD3Q8NCJ5 442 aa6.27□□□□□ -1.41
SUB1-202ENST00000502453 HRCP23327 699 aa6.24□□□□□ -1.41
SUB1-202ENST00000502453 VASPP50552 380 aaPredicted RBP6.24□□□□□ -1.41
SUB1-202ENST00000502453 IFNLR1Q8IU57 520 aaPredicted RBP6.23□□□□□ -1.41
SUB1-202ENST00000502453 ARID3AQ99856 593 aa6.21□□□□□ -1.41
SUB1-202ENST00000502453 EIF5BO60841 1220 aaKnown RBP6.21□□□□□ -1.42
SUB1-202ENST00000502453 ECM2O94769 699 aaPredicted RBP6.19□□□□□ -1.42
SUB1-202ENST00000502453 SPINK5Q9NQ38 1064 aaPredicted RBP6.17□□□□□ -1.42
SUB1-202ENST00000502453 MKRN4PQ13434 485 aaPredicted RBP6.17□□□□□ -1.42
SUB1-202ENST00000502453 ZNF219Q9P2Y4 722 aaPredicted RBP6.14□□□□□ -1.43
SUB1-202ENST00000502453 CHGAP10645 457 aaKnown RBP6.12□□□□□ -1.43
SUB1-202ENST00000502453 SAMD1Q6SPF0 538 aaPredicted RBP6.11□□□□□ -1.43
SUB1-202ENST00000502453 LOC105371045A0A1W2PR82 267 aa6.11□□□□□ -1.43
SUB1-202ENST00000502453 RGL2O15211 777 aa6.1□□□□□ -1.43
SUB1-202ENST00000502453 TRHP20396 242 aaPredicted RBP6.1□□□□□ -1.43
SUB1-202ENST00000502453 CCDC9Q9Y3X0 531 aaKnown RBP6.09□□□□□ -1.43
SUB1-202ENST00000502453 BRPF1P55201 1214 aaPredicted RBP6.08□□□□□ -1.44
SUB1-202ENST00000502453 SPDYE4A6NLX3 237 aa6.08□□□□□ -1.44
SUB1-202ENST00000502453 NEUROD2Q15784 382 aa6.07□□□□□ -1.44
SUB1-202ENST00000502453 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
SUB1-202ENST00000502453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.05□□□□□ -1.44
SUB1-202ENST00000502453 HNRNPUL2Q1KMD3 747 aaKnown RBP6.05□□□□□ -1.44
SUB1-202ENST00000502453 DNAJC5Q9H3Z4 198 aa6.05□□□□□ -1.44
SUB1-202ENST00000502453 POLA2Q14181 598 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms