RNA–Protein interactions for RNA: ENST00000500112.2

CASC19-201, Transcript of cancer susceptibility 19, humanhuman

TSL 1 (best) BASIC

Gene CASC19, Length 5,735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-201ENST00000500112 NISCHQ9Y2I1 1504 aa11.64□□□□□ -0.55
CASC19-201ENST00000500112 CCDC180Q9P1Z9 1646 aa10.48□□□□□ -0.73
CASC19-201ENST00000500112 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.81
CASC19-201ENST00000500112 MYO15BQ96JP2 1530 aa9.95□□□□□ -0.82
CASC19-201ENST00000500112 ZCCHC6Q5VYS8 1495 aaKnown RBP9.85□□□□□ -0.83
CASC19-201ENST00000500112 NACADO15069 1562 aa9.65□□□□□ -0.87
CASC19-201ENST00000500112 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
CASC19-201ENST00000500112 SHROOM4Q9ULL8 1493 aa9.51□□□□□ -0.89
CASC19-201ENST00000500112 RB1CC1Q8TDY2 1594 aa9.47□□□□□ -0.89
CASC19-201ENST00000500112 CHIC1Q5VXU3 224 aa9.32□□□□□ -0.92
CASC19-201ENST00000500112 ABCC9O60706 1549 aa9.26□□□□□ -0.93
CASC19-201ENST00000500112 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
CASC19-201ENST00000500112 SCRIBQ14160 1630 aa9.07□□□□□ -0.96
CASC19-201ENST00000500112 PEG3Q9GZU2 1588 aa9.04□□□□□ -0.96
CASC19-201ENST00000500112 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
CASC19-201ENST00000500112 UNC13AQ9UPW8 1703 aa8.98□□□□□ -0.97
CASC19-201ENST00000500112 SMARCA4P51532 1647 aa8.94□□□□□ -0.98
CASC19-201ENST00000500112 TOP2AP11388 1531 aaKnown RBP8.93□□□□□ -0.98
CASC19-201ENST00000500112 RSF1Q96T23 1441 aaPredicted RBP8.91□□□□□ -0.98
CASC19-201ENST00000500112 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
CASC19-201ENST00000500112 HMGXB3Q12766 1538 aa8.88□□□□□ -0.99
CASC19-201ENST00000500112 AEBP2Q6ZN18 517 aaPredicted RBP8.83□□□□□ -1
CASC19-201ENST00000500112 EEA1Q15075 1411 aa8.78□□□□□ -1
CASC19-201ENST00000500112 MROH2BQ7Z745 1585 aa8.77□□□□□ -1.01
CASC19-201ENST00000500112 NCAPD3P42695 1498 aa8.76□□□□□ -1.01
CASC19-201ENST00000500112 PRDM2Q13029 1718 aa8.74□□□□□ -1.01
CASC19-201ENST00000500112 EIF4G1Q04637 1599 aaKnown RBP8.71□□□□□ -1.01
CASC19-201ENST00000500112 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
CASC19-201ENST00000500112 ATAD2BQ9ULI0 1458 aa8.7□□□□□ -1.02
CASC19-201ENST00000500112 WIZO95785 1651 aa8.68□□□□□ -1.02
CASC19-201ENST00000500112 CECR2Q9BXF3 1484 aa8.67□□□□□ -1.02
CASC19-201ENST00000500112 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
CASC19-201ENST00000500112 ABCC8Q09428 1581 aa8.62□□□□□ -1.03
CASC19-201ENST00000500112 CCDC88BA6NC98 1476 aa8.59□□□□□ -1.03
CASC19-201ENST00000500112 WDR97A6NE52 1622 aa8.59□□□□□ -1.03
CASC19-201ENST00000500112 BIVM-ERCC5R4GMW8 1640 aa8.57□□□□□ -1.04
CASC19-201ENST00000500112 LAMC3Q9Y6N6 1575 aa8.53□□□□□ -1.04
CASC19-201ENST00000500112 CFTRP13569 1480 aa8.52□□□□□ -1.05
CASC19-201ENST00000500112 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
CASC19-201ENST00000500112 KIF21BO75037 1637 aa8.5□□□□□ -1.05
CASC19-201ENST00000500112 ERICH3Q5RHP9 1530 aa8.48□□□□□ -1.05
CASC19-201ENST00000500112 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CASC19-201ENST00000500112 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
CASC19-201ENST00000500112 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
CASC19-201ENST00000500112 CEP164Q9UPV0 1460 aa8.43□□□□□ -1.06
CASC19-201ENST00000500112 CADPSQ9ULU8 1353 aa8.43□□□□□ -1.06
CASC19-201ENST00000500112 GOLGA3Q08378 1498 aa8.41□□□□□ -1.06
CASC19-201ENST00000500112 DNMBPQ6XZF7 1577 aa8.4□□□□□ -1.06
CASC19-201ENST00000500112 PDS5BQ9NTI5 1447 aa8.4□□□□□ -1.07
CASC19-201ENST00000500112 TNIKQ9UKE5 1360 aa8.38□□□□□ -1.07
CASC19-201ENST00000500112 CUL7Q14999 1698 aa8.38□□□□□ -1.07
CASC19-201ENST00000500112 PABPN1Q86U42 306 aaKnown RBP eCLIP8.36□□□□□ -1.07
CASC19-201ENST00000500112 KIF27Q86VH2 1401 aa8.36□□□□□ -1.07
CASC19-201ENST00000500112 FAM9AQ8IZU1 332 aaPredicted RBP8.34□□□□□ -1.07
CASC19-201ENST00000500112 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
CASC19-201ENST00000500112 KIF21AQ7Z4S6 1674 aa8.32□□□□□ -1.08
CASC19-201ENST00000500112 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
CASC19-201ENST00000500112 MAP3K1Q13233 1512 aa8.3□□□□□ -1.08
CASC19-201ENST00000500112 ABCA10Q8WWZ4 1543 aa8.3□□□□□ -1.08
CASC19-201ENST00000500112 EFCAB5A4FU69 1503 aa8.29□□□□□ -1.08
CASC19-201ENST00000500112 FANCD2Q9BXW9 1451 aa8.28□□□□□ -1.08
CASC19-201ENST00000500112 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
CASC19-201ENST00000500112 CUX1P39880 1505 aa8.26□□□□□ -1.09
CASC19-201ENST00000500112 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
CASC19-201ENST00000500112 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
CASC19-201ENST00000500112 MRC2Q9UBG0 1479 aa8.24□□□□□ -1.09
CASC19-201ENST00000500112 THOC2Q8NI27 1593 aaKnown RBP8.24□□□□□ -1.09
CASC19-201ENST00000500112 WDR62O43379 1518 aa8.22□□□□□ -1.09
CASC19-201ENST00000500112 IFT140Q96RY7 1462 aa8.22□□□□□ -1.09
CASC19-201ENST00000500112 TOPBP1Q92547 1522 aa8.22□□□□□ -1.09
CASC19-201ENST00000500112 AQRO60306 1485 aaKnown RBP eCLIP8.22□□□□□ -1.093e-6■■■■□ 24.7
CASC19-201ENST00000500112 RAPGEF2Q9Y4G8 1499 aa8.2□□□□□ -1.1
CASC19-201ENST00000500112 ABCA5Q8WWZ7 1642 aa8.2□□□□□ -1.1
CASC19-201ENST00000500112 EHMT2Q96KQ7 1210 aa8.2□□□□□ -1.1
CASC19-201ENST00000500112 FHAD1B1AJZ9 1412 aa8.19□□□□□ -1.1
CASC19-201ENST00000500112 FGD5Q6ZNL6 1462 aa8.18□□□□□ -1.1
CASC19-201ENST00000500112 CTTNBP2Q8WZ74 1663 aa8.17□□□□□ -1.1
CASC19-201ENST00000500112 CEP162Q5TB80 1403 aa8.16□□□□□ -1.1
CASC19-201ENST00000500112 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
CASC19-201ENST00000500112 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
CASC19-201ENST00000500112 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
CASC19-201ENST00000500112 CLIP1P30622 1438 aa8.13□□□□□ -1.11
CASC19-201ENST00000500112 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
CASC19-201ENST00000500112 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
CASC19-201ENST00000500112 CUX2O14529 1486 aa8.12□□□□□ -1.11
CASC19-201ENST00000500112 SOGA1O94964 1423 aa8.12□□□□□ -1.11
CASC19-201ENST00000500112 GRIN2BQ13224 1484 aa8.11□□□□□ -1.11
CASC19-201ENST00000500112 PBRM1Q86U86 1689 aa8.11□□□□□ -1.11
CASC19-201ENST00000500112 FMN1Q68DA7 1419 aa8.1□□□□□ -1.11
CASC19-201ENST00000500112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.1□□□□□ -1.11
CASC19-201ENST00000500112 FYCO1Q9BQS8 1478 aa8.09□□□□□ -1.11
CASC19-201ENST00000500112 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
CASC19-201ENST00000500112 CARMIL1Q5VZK9 1371 aa8.09□□□□□ -1.11
CASC19-201ENST00000500112 URB2Q14146 1524 aaKnown RBP8.09□□□□□ -1.11
CASC19-201ENST00000500112 ADAMTS12P58397 1594 aa8.08□□□□□ -1.12
CASC19-201ENST00000500112 GAPVD1Q14C86 1478 aa8.08□□□□□ -1.12
CASC19-201ENST00000500112 CFAP43Q8NDM7 1665 aa8.08□□□□□ -1.12
CASC19-201ENST00000500112 APLP2Q06481 763 aa8.08□□□□□ -1.12
CASC19-201ENST00000500112 CLSPNQ9HAW4 1339 aa8.07□□□□□ -1.12
CASC19-201ENST00000500112 SAMD9Q5K651 1589 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms