RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
PAXBP1-209ENST00000497873 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
PAXBP1-209ENST00000497873 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
PAXBP1-209ENST00000497873 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
PAXBP1-209ENST00000497873 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
PAXBP1-209ENST00000497873 ADRA2BP18089 450 aa18.03■□□□□ 0.48
PAXBP1-209ENST00000497873 FOXD1Q16676 465 aa17.87■□□□□ 0.45
PAXBP1-209ENST00000497873 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
PAXBP1-209ENST00000497873 KCNA4P22459 653 aa17.59■□□□□ 0.41
PAXBP1-209ENST00000497873 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
PAXBP1-209ENST00000497873 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
PAXBP1-209ENST00000497873 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
PAXBP1-209ENST00000497873 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
PAXBP1-209ENST00000497873 CSRNP3Q8WYN3 585 aa16.77■□□□□ 0.28
PAXBP1-209ENST00000497873 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
PAXBP1-209ENST00000497873 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
PAXBP1-209ENST00000497873 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
PAXBP1-209ENST00000497873 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
PAXBP1-209ENST00000497873 ZBTB22O15209 634 aa16.21■□□□□ 0.19
PAXBP1-209ENST00000497873 MSH5O43196 834 aa16.07■□□□□ 0.16
PAXBP1-209ENST00000497873 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
PAXBP1-209ENST00000497873 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
PAXBP1-209ENST00000497873 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
PAXBP1-209ENST00000497873 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
PAXBP1-209ENST00000497873 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
PAXBP1-209ENST00000497873 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.07
PAXBP1-209ENST00000497873 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
PAXBP1-209ENST00000497873 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
PAXBP1-209ENST00000497873 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
PAXBP1-209ENST00000497873 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
PAXBP1-209ENST00000497873 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
PAXBP1-209ENST00000497873 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PAXBP1-209ENST00000497873 SLC24A1O60721 1099 aa15.04■□□□□ -0
PAXBP1-209ENST00000497873 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
PAXBP1-209ENST00000497873 ATF5Q9Y2D1 282 aaPredicted RBP14.88□□□□□ -0.03
PAXBP1-209ENST00000497873 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.034e-7■■■□□ 15.7
PAXBP1-209ENST00000497873 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.06
PAXBP1-209ENST00000497873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
PAXBP1-209ENST00000497873 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
PAXBP1-209ENST00000497873 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
PAXBP1-209ENST00000497873 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
PAXBP1-209ENST00000497873 APLP2Q06481 763 aa14.32□□□□□ -0.12
PAXBP1-209ENST00000497873 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
PAXBP1-209ENST00000497873 FBXO3Q9UK99 471 aa14.27□□□□□ -0.12
PAXBP1-209ENST00000497873 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
PAXBP1-209ENST00000497873 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
PAXBP1-209ENST00000497873 PROM2Q8N271 834 aa14.12□□□□□ -0.15
PAXBP1-209ENST00000497873 FBLN2P98095 1184 aa14.11□□□□□ -0.15
PAXBP1-209ENST00000497873 VASPP50552 380 aaPredicted RBP14.1□□□□□ -0.15
PAXBP1-209ENST00000497873 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
PAXBP1-209ENST00000497873 POLA2Q14181 598 aa14.06□□□□□ -0.16
PAXBP1-209ENST00000497873 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
PAXBP1-209ENST00000497873 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
PAXBP1-209ENST00000497873 CAPN15O75808 1086 aa13.97□□□□□ -0.17
PAXBP1-209ENST00000497873 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
PAXBP1-209ENST00000497873 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
PAXBP1-209ENST00000497873 PKD2Q13563 968 aa13.85□□□□□ -0.19
PAXBP1-209ENST00000497873 HAP1P54257 671 aaPredicted RBP13.84□□□□□ -0.19
PAXBP1-209ENST00000497873 ABCB7O75027 752 aa13.81□□□□□ -0.2
PAXBP1-209ENST00000497873 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
PAXBP1-209ENST00000497873 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
PAXBP1-209ENST00000497873 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
PAXBP1-209ENST00000497873 SPOCK2Q92563 424 aa13.66□□□□□ -0.22
PAXBP1-209ENST00000497873 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
PAXBP1-209ENST00000497873 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
PAXBP1-209ENST00000497873 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
PAXBP1-209ENST00000497873 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
PAXBP1-209ENST00000497873 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
PAXBP1-209ENST00000497873 BCANQ96GW7 911 aa13.55□□□□□ -0.24
PAXBP1-209ENST00000497873 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
PAXBP1-209ENST00000497873 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
PAXBP1-209ENST00000497873 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
PAXBP1-209ENST00000497873 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
PAXBP1-209ENST00000497873 DSG3P32926 999 aa13.52□□□□□ -0.25
PAXBP1-209ENST00000497873 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 MIER1Q8N108 512 aa13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
PAXBP1-209ENST00000497873 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
PAXBP1-209ENST00000497873 RGL2O15211 777 aa13.47□□□□□ -0.25
PAXBP1-209ENST00000497873 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.26
PAXBP1-209ENST00000497873 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
PAXBP1-209ENST00000497873 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
PAXBP1-209ENST00000497873 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
PAXBP1-209ENST00000497873 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
PAXBP1-209ENST00000497873 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
PAXBP1-209ENST00000497873 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PAXBP1-209ENST00000497873 TSHZ2Q9NRE2 1034 aa13.29□□□□□ -0.28
PAXBP1-209ENST00000497873 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
PAXBP1-209ENST00000497873 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
PAXBP1-209ENST00000497873 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
PAXBP1-209ENST00000497873 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
PAXBP1-209ENST00000497873 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
PAXBP1-209ENST00000497873 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
PAXBP1-209ENST00000497873 GSE1Q14687 1217 aa13.08□□□□□ -0.32
PAXBP1-209ENST00000497873 NUBP1P53384 320 aa13.04□□□□□ -0.32
PAXBP1-209ENST00000497873 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms