RNA–Protein interactions for RNA: ENST00000491303.2

UBA52P3-201, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3, humanhuman

BASIC

Gene UBA52P3, Length 382 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P3-201ENST00000491303 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
UBA52P3-201ENST00000491303 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
UBA52P3-201ENST00000491303 PHF23Q9BUL5 403 aaPredicted RBP13.83□□□□□ -0.2
UBA52P3-201ENST00000491303 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
UBA52P3-201ENST00000491303 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
UBA52P3-201ENST00000491303 ADRA2BP18089 450 aa12.17□□□□□ -0.46
UBA52P3-201ENST00000491303 FOXD1Q16676 465 aa12.03□□□□□ -0.48
UBA52P3-201ENST00000491303 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
UBA52P3-201ENST00000491303 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
UBA52P3-201ENST00000491303 KCNA4P22459 653 aa11.97□□□□□ -0.49
UBA52P3-201ENST00000491303 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
UBA52P3-201ENST00000491303 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
UBA52P3-201ENST00000491303 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
UBA52P3-201ENST00000491303 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
UBA52P3-201ENST00000491303 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
UBA52P3-201ENST00000491303 NPM3O75607 178 aaKnown RBP11.26□□□□□ -0.61
UBA52P3-201ENST00000491303 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
UBA52P3-201ENST00000491303 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
UBA52P3-201ENST00000491303 ZBTB22O15209 634 aa10.98□□□□□ -0.65
UBA52P3-201ENST00000491303 MSH5O43196 834 aa10.92□□□□□ -0.66
UBA52P3-201ENST00000491303 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
UBA52P3-201ENST00000491303 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
UBA52P3-201ENST00000491303 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
UBA52P3-201ENST00000491303 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.69
UBA52P3-201ENST00000491303 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.73
UBA52P3-201ENST00000491303 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
UBA52P3-201ENST00000491303 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
UBA52P3-201ENST00000491303 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
UBA52P3-201ENST00000491303 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
UBA52P3-201ENST00000491303 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
UBA52P3-201ENST00000491303 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
UBA52P3-201ENST00000491303 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
UBA52P3-201ENST00000491303 FKBP8Q14318 412 aa10.39□□□□□ -0.75
UBA52P3-201ENST00000491303 DCAF8L1A6NGE4 600 aa10.2□□□□□ -0.78
UBA52P3-201ENST00000491303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.78
UBA52P3-201ENST00000491303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
UBA52P3-201ENST00000491303 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
UBA52P3-201ENST00000491303 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
UBA52P3-201ENST00000491303 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
UBA52P3-201ENST00000491303 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
UBA52P3-201ENST00000491303 APLP2Q06481 763 aa9.89□□□□□ -0.83
UBA52P3-201ENST00000491303 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
UBA52P3-201ENST00000491303 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
UBA52P3-201ENST00000491303 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
UBA52P3-201ENST00000491303 POTEDQ86YR6 584 aa9.75□□□□□ -0.85
UBA52P3-201ENST00000491303 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
UBA52P3-201ENST00000491303 FBLN2P98095 1184 aa9.71□□□□□ -0.86
UBA52P3-201ENST00000491303 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
UBA52P3-201ENST00000491303 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
UBA52P3-201ENST00000491303 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
UBA52P3-201ENST00000491303 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
UBA52P3-201ENST00000491303 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
UBA52P3-201ENST00000491303 PROM2Q8N271 834 aa9.58□□□□□ -0.88
UBA52P3-201ENST00000491303 POLA2Q14181 598 aa9.56□□□□□ -0.88
UBA52P3-201ENST00000491303 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
UBA52P3-201ENST00000491303 CAPN15O75808 1086 aa9.54□□□□□ -0.88
UBA52P3-201ENST00000491303 SPINK5Q9NQ38 1064 aaPredicted RBP9.51□□□□□ -0.89
UBA52P3-201ENST00000491303 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
UBA52P3-201ENST00000491303 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
UBA52P3-201ENST00000491303 PKD2Q13563 968 aa9.45□□□□□ -0.9
UBA52P3-201ENST00000491303 BCANQ96GW7 911 aa9.45□□□□□ -0.9
UBA52P3-201ENST00000491303 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
UBA52P3-201ENST00000491303 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
UBA52P3-201ENST00000491303 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
UBA52P3-201ENST00000491303 ABCB7O75027 752 aa9.39□□□□□ -0.91
UBA52P3-201ENST00000491303 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
UBA52P3-201ENST00000491303 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
UBA52P3-201ENST00000491303 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
UBA52P3-201ENST00000491303 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
UBA52P3-201ENST00000491303 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
UBA52P3-201ENST00000491303 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
UBA52P3-201ENST00000491303 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
UBA52P3-201ENST00000491303 C1QBPQ07021 282 aaKnown RBP9.32□□□□□ -0.92
UBA52P3-201ENST00000491303 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
UBA52P3-201ENST00000491303 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
UBA52P3-201ENST00000491303 MIER1Q8N108 512 aa9.28□□□□□ -0.92
UBA52P3-201ENST00000491303 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
UBA52P3-201ENST00000491303 PLEKHG5O94827 1062 aa9.25□□□□□ -0.93
UBA52P3-201ENST00000491303 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 NPM1P06748 294 aaKnown RBP eCLIP9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 SPDYE2Q495Y8 402 aa9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 SPRYD3Q8NCJ5 442 aa9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 CIZ1Q9ULV3 898 aaPredicted RBP9.22□□□□□ -0.93
UBA52P3-201ENST00000491303 RGL2O15211 777 aa9.21□□□□□ -0.94
UBA52P3-201ENST00000491303 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
UBA52P3-201ENST00000491303 OSCARQ8IYS5 282 aa9.21□□□□□ -0.94
UBA52P3-201ENST00000491303 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
UBA52P3-201ENST00000491303 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
UBA52P3-201ENST00000491303 ZBTB47Q9UFB7 747 aaPredicted RBP9.19□□□□□ -0.94
UBA52P3-201ENST00000491303 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
UBA52P3-201ENST00000491303 SSUH2Q9Y2M2 353 aa9.16□□□□□ -0.94
UBA52P3-201ENST00000491303 DSG3P32926 999 aa9.12□□□□□ -0.95
UBA52P3-201ENST00000491303 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
UBA52P3-201ENST00000491303 TRIM41Q8WV44 630 aa9.08□□□□□ -0.96
UBA52P3-201ENST00000491303 NBR1Q14596 966 aa9.07□□□□□ -0.96
UBA52P3-201ENST00000491303 GSE1Q14687 1217 aa9.01□□□□□ -0.97
UBA52P3-201ENST00000491303 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
UBA52P3-201ENST00000491303 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
UBA52P3-201ENST00000491303 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms