RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
TTC3-218ENST00000484047 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
TTC3-218ENST00000484047 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
TTC3-218ENST00000484047 PLPPR3Q6T4P5 718 aa25.09■■□□□ 1.61
TTC3-218ENST00000484047 SENP3Q9H4L4 574 aaPredicted RBP24.65■■□□□ 1.54
TTC3-218ENST00000484047 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
TTC3-218ENST00000484047 ADRA2BP18089 450 aa23.67■■□□□ 1.38
TTC3-218ENST00000484047 KCNA4P22459 653 aa23.6■■□□□ 1.37
TTC3-218ENST00000484047 PPP6R1Q9UPN7 881 aa23.23■■□□□ 1.31
TTC3-218ENST00000484047 FOXD1Q16676 465 aa22.84■■□□□ 1.25
TTC3-218ENST00000484047 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
TTC3-218ENST00000484047 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
TTC3-218ENST00000484047 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
TTC3-218ENST00000484047 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
TTC3-218ENST00000484047 NPM3O75607 178 aaKnown RBP21.92■■□□□ 1.1
TTC3-218ENST00000484047 PIAS4Q8N2W9 510 aaPredicted RBP21.85■■□□□ 1.09
TTC3-218ENST00000484047 ZBTB22O15209 634 aa21.82■■□□□ 1.08
TTC3-218ENST00000484047 SLC24A1O60721 1099 aa21.58■■□□□ 1.04
TTC3-218ENST00000484047 RTN4Q9NQC3 1192 aaKnown RBP21.35■■□□□ 1.01
TTC3-218ENST00000484047 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
TTC3-218ENST00000484047 FOXD4L1Q9NU39 408 aa21.17■□□□□ 0.98
TTC3-218ENST00000484047 AMER1Q5JTC6 1135 aaPredicted RBP21.15■□□□□ 0.98
TTC3-218ENST00000484047 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
TTC3-218ENST00000484047 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
TTC3-218ENST00000484047 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
TTC3-218ENST00000484047 RNF216Q9NWF9 866 aaPredicted RBP20.57■□□□□ 0.88
TTC3-218ENST00000484047 FKBP8Q14318 412 aa20.5■□□□□ 0.87
TTC3-218ENST00000484047 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
TTC3-218ENST00000484047 MSH5O43196 834 aa20.31■□□□□ 0.84
TTC3-218ENST00000484047 ATXN8OSP0DMR3 200 aa20.22■□□□□ 0.83
TTC3-218ENST00000484047 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
TTC3-218ENST00000484047 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
TTC3-218ENST00000484047 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
TTC3-218ENST00000484047 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
TTC3-218ENST00000484047 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
TTC3-218ENST00000484047 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
TTC3-218ENST00000484047 PRKCSHP14314 528 aaPredicted RBP19.21■□□□□ 0.67
TTC3-218ENST00000484047 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
TTC3-218ENST00000484047 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
TTC3-218ENST00000484047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.665e-7■■□□□ 13.6
TTC3-218ENST00000484047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
TTC3-218ENST00000484047 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
TTC3-218ENST00000484047 BCANQ96GW7 911 aa19.13■□□□□ 0.65
TTC3-218ENST00000484047 U3KPZ7 1027 aaPredicted RBP19.11■□□□□ 0.65
TTC3-218ENST00000484047 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
TTC3-218ENST00000484047 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
TTC3-218ENST00000484047 SPDYE4A6NLX3 237 aa19.04■□□□□ 0.64
TTC3-218ENST00000484047 VASPP50552 380 aaPredicted RBP19.02■□□□□ 0.64
TTC3-218ENST00000484047 ZNF219Q9P2Y4 722 aaPredicted RBP19.02■□□□□ 0.64
TTC3-218ENST00000484047 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.64
TTC3-218ENST00000484047 IFNLR1Q8IU57 520 aaPredicted RBP18.96■□□□□ 0.63
TTC3-218ENST00000484047 PROM2Q8N271 834 aa18.94■□□□□ 0.62
TTC3-218ENST00000484047 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
TTC3-218ENST00000484047 PKD2Q13563 968 aa18.9■□□□□ 0.62
TTC3-218ENST00000484047 MKRN4PQ13434 485 aaPredicted RBP18.85■□□□□ 0.61
TTC3-218ENST00000484047 KDM2AQ9Y2K7 1162 aa18.75■□□□□ 0.59
TTC3-218ENST00000484047 TPRNQ4KMQ1 711 aa18.73■□□□□ 0.59
TTC3-218ENST00000484047 FBLN2P98095 1184 aa18.66■□□□□ 0.58
TTC3-218ENST00000484047 BBXQ8WY36 941 aaPredicted RBP18.57■□□□□ 0.56
TTC3-218ENST00000484047 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
TTC3-218ENST00000484047 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
TTC3-218ENST00000484047 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
TTC3-218ENST00000484047 APLP2Q06481 763 aa18.52■□□□□ 0.56
TTC3-218ENST00000484047 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
TTC3-218ENST00000484047 ECM2O94769 699 aaPredicted RBP18.42■□□□□ 0.54
TTC3-218ENST00000484047 SPOCK2Q92563 424 aa18.35■□□□□ 0.53
TTC3-218ENST00000484047 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.53
TTC3-218ENST00000484047 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
TTC3-218ENST00000484047 RGL2O15211 777 aa18.29■□□□□ 0.52
TTC3-218ENST00000484047 POLA2Q14181 598 aa18.29■□□□□ 0.52
TTC3-218ENST00000484047 SPRYD3Q8NCJ5 442 aa18.25■□□□□ 0.51
TTC3-218ENST00000484047 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
TTC3-218ENST00000484047 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
TTC3-218ENST00000484047 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
TTC3-218ENST00000484047 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
TTC3-218ENST00000484047 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
TTC3-218ENST00000484047 NBR1Q14596 966 aa18■□□□□ 0.47
TTC3-218ENST00000484047 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
TTC3-218ENST00000484047 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
TTC3-218ENST00000484047 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
TTC3-218ENST00000484047 CAPN15O75808 1086 aa17.94■□□□□ 0.46
TTC3-218ENST00000484047 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
TTC3-218ENST00000484047 MIER1Q8N108 512 aa17.87■□□□□ 0.45
TTC3-218ENST00000484047 CIZ1Q9ULV3 898 aaPredicted RBP17.86■□□□□ 0.45
TTC3-218ENST00000484047 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
TTC3-218ENST00000484047 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
TTC3-218ENST00000484047 ABCB7O75027 752 aa17.81■□□□□ 0.44
TTC3-218ENST00000484047 HS6ST3Q8IZP7 471 aa17.78■□□□□ 0.44
TTC3-218ENST00000484047 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
TTC3-218ENST00000484047 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
TTC3-218ENST00000484047 RNF25Q96BH1 459 aaPredicted RBP17.66■□□□□ 0.42
TTC3-218ENST00000484047 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
TTC3-218ENST00000484047 NKX1-1Q15270 411 aaPredicted RBP17.64■□□□□ 0.41
TTC3-218ENST00000484047 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
TTC3-218ENST00000484047 ARXQ96QS3 562 aa17.62■□□□□ 0.41
TTC3-218ENST00000484047 SPDYE2BA6NHP3 402 aa17.61■□□□□ 0.41
TTC3-218ENST00000484047 SPDYE6P0CI01 402 aa17.61■□□□□ 0.41
TTC3-218ENST00000484047 SPDYE2Q495Y8 402 aa17.61■□□□□ 0.41
TTC3-218ENST00000484047 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
TTC3-218ENST00000484047 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms