RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
SEC22A-207ENST00000481965 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
SEC22A-207ENST00000481965 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
SEC22A-207ENST00000481965 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
SEC22A-207ENST00000481965 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
SEC22A-207ENST00000481965 ADRA2BP18089 450 aa20.36■□□□□ 0.85
SEC22A-207ENST00000481965 FOXD1Q16676 465 aa20.32■□□□□ 0.84
SEC22A-207ENST00000481965 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
SEC22A-207ENST00000481965 KCNA4P22459 653 aa19.72■□□□□ 0.75
SEC22A-207ENST00000481965 PIAS4Q8N2W9 510 aaPredicted RBP19.28■□□□□ 0.68
SEC22A-207ENST00000481965 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
SEC22A-207ENST00000481965 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
SEC22A-207ENST00000481965 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
SEC22A-207ENST00000481965 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
SEC22A-207ENST00000481965 CSRNP3Q8WYN3 585 aa18.74■□□□□ 0.59
SEC22A-207ENST00000481965 NPM3O75607 178 aaKnown RBP18.67■□□□□ 0.58
SEC22A-207ENST00000481965 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
SEC22A-207ENST00000481965 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SEC22A-207ENST00000481965 MSH5O43196 834 aa18.27■□□□□ 0.52
SEC22A-207ENST00000481965 ZBTB22O15209 634 aa18.24■□□□□ 0.51
SEC22A-207ENST00000481965 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
SEC22A-207ENST00000481965 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
SEC22A-207ENST00000481965 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
SEC22A-207ENST00000481965 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
SEC22A-207ENST00000481965 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
SEC22A-207ENST00000481965 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
SEC22A-207ENST00000481965 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
SEC22A-207ENST00000481965 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
SEC22A-207ENST00000481965 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
SEC22A-207ENST00000481965 FKBP8Q14318 412 aa16.82■□□□□ 0.28
SEC22A-207ENST00000481965 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
SEC22A-207ENST00000481965 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
SEC22A-207ENST00000481965 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
SEC22A-207ENST00000481965 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
SEC22A-207ENST00000481965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■■□□□ 11.9
SEC22A-207ENST00000481965 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
SEC22A-207ENST00000481965 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
SEC22A-207ENST00000481965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
SEC22A-207ENST00000481965 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
SEC22A-207ENST00000481965 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
SEC22A-207ENST00000481965 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
SEC22A-207ENST00000481965 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
SEC22A-207ENST00000481965 APLP2Q06481 763 aa16.1■□□□□ 0.17
SEC22A-207ENST00000481965 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
SEC22A-207ENST00000481965 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
SEC22A-207ENST00000481965 PROM2Q8N271 834 aa15.95■□□□□ 0.14
SEC22A-207ENST00000481965 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
SEC22A-207ENST00000481965 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
SEC22A-207ENST00000481965 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
SEC22A-207ENST00000481965 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
SEC22A-207ENST00000481965 POLA2Q14181 598 aa15.82■□□□□ 0.12
SEC22A-207ENST00000481965 FBLN2P98095 1184 aa15.8■□□□□ 0.12
SEC22A-207ENST00000481965 VASPP50552 380 aaPredicted RBP15.75■□□□□ 0.11
SEC22A-207ENST00000481965 CAPN15O75808 1086 aa15.72■□□□□ 0.11
SEC22A-207ENST00000481965 IFNLR1Q8IU57 520 aaPredicted RBP15.66■□□□□ 0.1
SEC22A-207ENST00000481965 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
SEC22A-207ENST00000481965 ABCB7O75027 752 aa15.57■□□□□ 0.08
SEC22A-207ENST00000481965 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
SEC22A-207ENST00000481965 PKD2Q13563 968 aa15.47■□□□□ 0.07
SEC22A-207ENST00000481965 PLCB2Q00722 1185 aa15.46■□□□□ 0.07
SEC22A-207ENST00000481965 DSG3P32926 999 aa15.36■□□□□ 0.05
SEC22A-207ENST00000481965 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
SEC22A-207ENST00000481965 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
SEC22A-207ENST00000481965 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SEC22A-207ENST00000481965 SSUH2Q9Y2M2 353 aa15.28■□□□□ 0.04
SEC22A-207ENST00000481965 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
SEC22A-207ENST00000481965 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
SEC22A-207ENST00000481965 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
SEC22A-207ENST00000481965 SPDYE2Q495Y8 402 aa15.23■□□□□ 0.03
SEC22A-207ENST00000481965 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
SEC22A-207ENST00000481965 STAG3Q9UJ98 1225 aa15.2■□□□□ 0.02
SEC22A-207ENST00000481965 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
SEC22A-207ENST00000481965 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEC22A-207ENST00000481965 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
SEC22A-207ENST00000481965 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC22A-207ENST00000481965 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
SEC22A-207ENST00000481965 RGL2O15211 777 aa15.04■□□□□ -0
SEC22A-207ENST00000481965 MIER1Q8N108 512 aa15.03■□□□□ -0
SEC22A-207ENST00000481965 BBXQ8WY36 941 aaPredicted RBP15.02■□□□□ -0
SEC22A-207ENST00000481965 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
SEC22A-207ENST00000481965 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
SEC22A-207ENST00000481965 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
SEC22A-207ENST00000481965 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
SEC22A-207ENST00000481965 BCANQ96GW7 911 aa14.86□□□□□ -0.03
SEC22A-207ENST00000481965 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
SEC22A-207ENST00000481965 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
SEC22A-207ENST00000481965 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
SEC22A-207ENST00000481965 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
SEC22A-207ENST00000481965 CHGAP10645 457 aaKnown RBP14.75□□□□□ -0.05
SEC22A-207ENST00000481965 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
SEC22A-207ENST00000481965 SPRYD3Q8NCJ5 442 aa14.75□□□□□ -0.05
SEC22A-207ENST00000481965 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
SEC22A-207ENST00000481965 TSHZ2Q9NRE2 1034 aa14.74□□□□□ -0.05
SEC22A-207ENST00000481965 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
SEC22A-207ENST00000481965 TAOK2Q9UL54 1235 aa14.71□□□□□ -0.05
SEC22A-207ENST00000481965 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
SEC22A-207ENST00000481965 NUBP1P53384 320 aa14.68□□□□□ -0.06
SEC22A-207ENST00000481965 HS6ST3Q8IZP7 471 aa14.65□□□□□ -0.06
SEC22A-207ENST00000481965 GSE1Q14687 1217 aa14.6□□□□□ -0.07
SEC22A-207ENST00000481965 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms