RNA–Protein interactions for RNA: ENST00000478239.5

AC099542.1-201, humanhuman

TSL 3

Gene AC099542.1, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099542.1-201ENST00000478239 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
AC099542.1-201ENST00000478239 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
AC099542.1-201ENST00000478239 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
AC099542.1-201ENST00000478239 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
AC099542.1-201ENST00000478239 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
AC099542.1-201ENST00000478239 FOXD1Q16676 465 aa13.44□□□□□ -0.26
AC099542.1-201ENST00000478239 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
AC099542.1-201ENST00000478239 ADRA2BP18089 450 aa12.87□□□□□ -0.35
AC099542.1-201ENST00000478239 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
AC099542.1-201ENST00000478239 KCNA4P22459 653 aa12.74□□□□□ -0.37
AC099542.1-201ENST00000478239 MSH5O43196 834 aa12.71□□□□□ -0.37
AC099542.1-201ENST00000478239 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
AC099542.1-201ENST00000478239 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.41
AC099542.1-201ENST00000478239 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
AC099542.1-201ENST00000478239 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
AC099542.1-201ENST00000478239 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
AC099542.1-201ENST00000478239 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
AC099542.1-201ENST00000478239 ZBTB22O15209 634 aa11.83□□□□□ -0.52
AC099542.1-201ENST00000478239 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
AC099542.1-201ENST00000478239 CNKSR2Q8WXI2 1034 aa11.51□□□□□ -0.57
AC099542.1-201ENST00000478239 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
AC099542.1-201ENST00000478239 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
AC099542.1-201ENST00000478239 FOXD4L1Q9NU39 408 aa11.39□□□□□ -0.59
AC099542.1-201ENST00000478239 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
AC099542.1-201ENST00000478239 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
AC099542.1-201ENST00000478239 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
AC099542.1-201ENST00000478239 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
AC099542.1-201ENST00000478239 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
AC099542.1-201ENST00000478239 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
AC099542.1-201ENST00000478239 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
AC099542.1-201ENST00000478239 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
AC099542.1-201ENST00000478239 NISCHQ9Y2I1 1504 aa11.03□□□□□ -0.64
AC099542.1-201ENST00000478239 FKBP8Q14318 412 aa10.99□□□□□ -0.65
AC099542.1-201ENST00000478239 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
AC099542.1-201ENST00000478239 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
AC099542.1-201ENST00000478239 RNF39Q9H2S5 420 aa10.84□□□□□ -0.67
AC099542.1-201ENST00000478239 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
AC099542.1-201ENST00000478239 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
AC099542.1-201ENST00000478239 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
AC099542.1-201ENST00000478239 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
AC099542.1-201ENST00000478239 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
AC099542.1-201ENST00000478239 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
AC099542.1-201ENST00000478239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.75
AC099542.1-201ENST00000478239 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
AC099542.1-201ENST00000478239 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
AC099542.1-201ENST00000478239 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
AC099542.1-201ENST00000478239 HAP1P54257 671 aaPredicted RBP10.25□□□□□ -0.77
AC099542.1-201ENST00000478239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
AC099542.1-201ENST00000478239 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
AC099542.1-201ENST00000478239 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
AC099542.1-201ENST00000478239 PROM2Q8N271 834 aa10.23□□□□□ -0.77
AC099542.1-201ENST00000478239 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
AC099542.1-201ENST00000478239 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
AC099542.1-201ENST00000478239 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
AC099542.1-201ENST00000478239 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
AC099542.1-201ENST00000478239 PKD2Q13563 968 aa10.16□□□□□ -0.78
AC099542.1-201ENST00000478239 DCAF8L2P0C7V8 631 aa10.15□□□□□ -0.78
AC099542.1-201ENST00000478239 POTEHQ6S545 545 aa10.15□□□□□ -0.78
AC099542.1-201ENST00000478239 BCANQ96GW7 911 aa10.1□□□□□ -0.79
AC099542.1-201ENST00000478239 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
AC099542.1-201ENST00000478239 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
AC099542.1-201ENST00000478239 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
AC099542.1-201ENST00000478239 DSG3P32926 999 aa10.01□□□□□ -0.81
AC099542.1-201ENST00000478239 FBLN2P98095 1184 aa10.01□□□□□ -0.81
AC099542.1-201ENST00000478239 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
AC099542.1-201ENST00000478239 TPRNQ4KMQ1 711 aa9.97□□□□□ -0.81
AC099542.1-201ENST00000478239 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
AC099542.1-201ENST00000478239 CAPN15O75808 1086 aa9.92□□□□□ -0.82
AC099542.1-201ENST00000478239 APLP2Q06481 763 aa9.91□□□□□ -0.82
AC099542.1-201ENST00000478239 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
AC099542.1-201ENST00000478239 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
AC099542.1-201ENST00000478239 POLA2Q14181 598 aa9.88□□□□□ -0.83
AC099542.1-201ENST00000478239 TRHP20396 242 aaPredicted RBP9.87□□□□□ -0.83
AC099542.1-201ENST00000478239 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
AC099542.1-201ENST00000478239 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
AC099542.1-201ENST00000478239 RGL2O15211 777 aa9.84□□□□□ -0.83
AC099542.1-201ENST00000478239 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
AC099542.1-201ENST00000478239 SPOCK2Q92563 424 aa9.82□□□□□ -0.84
AC099542.1-201ENST00000478239 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
AC099542.1-201ENST00000478239 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
AC099542.1-201ENST00000478239 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
AC099542.1-201ENST00000478239 ABCB7O75027 752 aa9.7□□□□□ -0.86
AC099542.1-201ENST00000478239 DNAJC5Q9H3Z4 198 aa9.66□□□□□ -0.86
AC099542.1-201ENST00000478239 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
AC099542.1-201ENST00000478239 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
AC099542.1-201ENST00000478239 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
AC099542.1-201ENST00000478239 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
AC099542.1-201ENST00000478239 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
AC099542.1-201ENST00000478239 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
AC099542.1-201ENST00000478239 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
AC099542.1-201ENST00000478239 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
AC099542.1-201ENST00000478239 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
AC099542.1-201ENST00000478239 MIER1Q8N108 512 aa9.57□□□□□ -0.88
AC099542.1-201ENST00000478239 CIZ1Q9ULV3 898 aaPredicted RBP9.57□□□□□ -0.88
AC099542.1-201ENST00000478239 RNF25Q96BH1 459 aaPredicted RBP9.55□□□□□ -0.88
AC099542.1-201ENST00000478239 PABPN1Q86U42 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
AC099542.1-201ENST00000478239 NBR1Q14596 966 aa9.53□□□□□ -0.88
AC099542.1-201ENST00000478239 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
AC099542.1-201ENST00000478239 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
AC099542.1-201ENST00000478239 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms