RNA–Protein interactions for RNA: ENST00000477193.1

SRSF4-203, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 206 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-203ENST00000477193 CHIC1Q5VXU3 224 aa14.31□□□□□ -0.12
SRSF4-203ENST00000477193 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
SRSF4-203ENST00000477193 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-203ENST00000477193 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
SRSF4-203ENST00000477193 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
SRSF4-203ENST00000477193 ADRA2BP18089 450 aa11.12□□□□□ -0.63
SRSF4-203ENST00000477193 FOXD1Q16676 465 aa11.09□□□□□ -0.63
SRSF4-203ENST00000477193 PPP6R1Q9UPN7 881 aa11.06□□□□□ -0.64
SRSF4-203ENST00000477193 KCNA4P22459 653 aa10.78□□□□□ -0.68
SRSF4-203ENST00000477193 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
SRSF4-203ENST00000477193 PIAS4Q8N2W9 510 aaPredicted RBP10.51□□□□□ -0.73
SRSF4-203ENST00000477193 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
SRSF4-203ENST00000477193 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
SRSF4-203ENST00000477193 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
SRSF4-203ENST00000477193 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
SRSF4-203ENST00000477193 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
SRSF4-203ENST00000477193 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
SRSF4-203ENST00000477193 ZBTB22O15209 634 aa9.97□□□□□ -0.81
SRSF4-203ENST00000477193 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.82
SRSF4-203ENST00000477193 MSH5O43196 834 aa9.94□□□□□ -0.82
SRSF4-203ENST00000477193 MAPK8IP2Q13387 824 aaPredicted RBP9.92□□□□□ -0.82
SRSF4-203ENST00000477193 DNAJC5BQ9UF47 199 aa9.8□□□□□ -0.84
SRSF4-203ENST00000477193 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
SRSF4-203ENST00000477193 RNF216Q9NWF9 866 aaPredicted RBP9.73□□□□□ -0.85
SRSF4-203ENST00000477193 DMRT2Q9Y5R5 561 aa9.62□□□□□ -0.87
SRSF4-203ENST00000477193 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
SRSF4-203ENST00000477193 SLC4A2P04920 1241 aa9.55□□□□□ -0.88
SRSF4-203ENST00000477193 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
SRSF4-203ENST00000477193 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
SRSF4-203ENST00000477193 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
SRSF4-203ENST00000477193 FKBP8Q14318 412 aa9.19□□□□□ -0.94
SRSF4-203ENST00000477193 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
SRSF4-203ENST00000477193 DCAF8L1A6NGE4 600 aa9.14□□□□□ -0.95
SRSF4-203ENST00000477193 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
SRSF4-203ENST00000477193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.1□□□□□ -0.951e-6■□□□□ 9.2
SRSF4-203ENST00000477193 U3KPZ7 1027 aaPredicted RBP9.09□□□□□ -0.95
SRSF4-203ENST00000477193 SAMD1Q6SPF0 538 aaPredicted RBP9.01□□□□□ -0.97
SRSF4-203ENST00000477193 SLC24A1O60721 1099 aa9□□□□□ -0.97
SRSF4-203ENST00000477193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.98□□□□□ -0.97
SRSF4-203ENST00000477193 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
SRSF4-203ENST00000477193 ZNF219Q9P2Y4 722 aaPredicted RBP8.89□□□□□ -0.99
SRSF4-203ENST00000477193 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
SRSF4-203ENST00000477193 APLP2Q06481 763 aa8.75□□□□□ -1.01
SRSF4-203ENST00000477193 SPDYE4A6NLX3 237 aa8.73□□□□□ -1.01
SRSF4-203ENST00000477193 SPINK5Q9NQ38 1064 aaPredicted RBP8.71□□□□□ -1.02
SRSF4-203ENST00000477193 PROM2Q8N271 834 aa8.7□□□□□ -1.02
SRSF4-203ENST00000477193 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
SRSF4-203ENST00000477193 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
SRSF4-203ENST00000477193 POLA2Q14181 598 aa8.63□□□□□ -1.03
SRSF4-203ENST00000477193 RNF39Q9H2S5 420 aa8.63□□□□□ -1.03
SRSF4-203ENST00000477193 FBLN2P98095 1184 aa8.61□□□□□ -1.03
SRSF4-203ENST00000477193 VASPP50552 380 aaPredicted RBP8.6□□□□□ -1.03
SRSF4-203ENST00000477193 CAPN15O75808 1086 aa8.58□□□□□ -1.04
SRSF4-203ENST00000477193 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
SRSF4-203ENST00000477193 ABCB7O75027 752 aa8.51□□□□□ -1.05
SRSF4-203ENST00000477193 C1QBPQ07021 282 aaKnown RBP8.49□□□□□ -1.05
SRSF4-203ENST00000477193 PKD2Q13563 968 aa8.46□□□□□ -1.06
SRSF4-203ENST00000477193 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
SRSF4-203ENST00000477193 ZBTB12Q9Y330 459 aaPredicted RBP8.43□□□□□ -1.06
SRSF4-203ENST00000477193 DSG3P32926 999 aa8.37□□□□□ -1.07
SRSF4-203ENST00000477193 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
SRSF4-203ENST00000477193 POTEDQ86YR6 584 aa8.35□□□□□ -1.07
SRSF4-203ENST00000477193 OSCARQ8IYS5 282 aa8.35□□□□□ -1.07
SRSF4-203ENST00000477193 ZNF692Q9BU19 519 aaPredicted RBP8.34□□□□□ -1.07
SRSF4-203ENST00000477193 SSUH2Q9Y2M2 353 aa8.33□□□□□ -1.08
SRSF4-203ENST00000477193 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
SRSF4-203ENST00000477193 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
SRSF4-203ENST00000477193 SPDYE2BA6NHP3 402 aa8.29□□□□□ -1.08
SRSF4-203ENST00000477193 SPDYE6P0CI01 402 aa8.29□□□□□ -1.08
SRSF4-203ENST00000477193 SPDYE2Q495Y8 402 aa8.29□□□□□ -1.08
SRSF4-203ENST00000477193 KLHL34Q8N239 644 aa8.29□□□□□ -1.08
SRSF4-203ENST00000477193 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
SRSF4-203ENST00000477193 STAG3Q9UJ98 1225 aa8.27□□□□□ -1.09
SRSF4-203ENST00000477193 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
SRSF4-203ENST00000477193 ECM2O94769 699 aaPredicted RBP8.25□□□□□ -1.09
SRSF4-203ENST00000477193 PLCD3Q8N3E9 789 aa8.23□□□□□ -1.09
SRSF4-203ENST00000477193 RGL2O15211 777 aa8.22□□□□□ -1.09
SRSF4-203ENST00000477193 MIER1Q8N108 512 aa8.2□□□□□ -1.1
SRSF4-203ENST00000477193 BBXQ8WY36 941 aaPredicted RBP8.2□□□□□ -1.1
SRSF4-203ENST00000477193 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
SRSF4-203ENST00000477193 KDM2AQ9Y2K7 1162 aa8.16□□□□□ -1.1
SRSF4-203ENST00000477193 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
SRSF4-203ENST00000477193 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
SRSF4-203ENST00000477193 CFAP44Q96MT7 982 aa8.12□□□□□ -1.11
SRSF4-203ENST00000477193 BCANQ96GW7 911 aa8.11□□□□□ -1.11
SRSF4-203ENST00000477193 CIZ1Q9ULV3 898 aaPredicted RBP8.11□□□□□ -1.11
SRSF4-203ENST00000477193 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
SRSF4-203ENST00000477193 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
SRSF4-203ENST00000477193 CHGAP10645 457 aaKnown RBP8.06□□□□□ -1.12
SRSF4-203ENST00000477193 SPRYD3Q8NCJ5 442 aa8.05□□□□□ -1.12
SRSF4-203ENST00000477193 ZBTB47Q9UFB7 747 aaPredicted RBP8.05□□□□□ -1.12
SRSF4-203ENST00000477193 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
SRSF4-203ENST00000477193 RNF25Q96BH1 459 aaPredicted RBP8.04□□□□□ -1.12
SRSF4-203ENST00000477193 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
SRSF4-203ENST00000477193 CACNB1Q02641 598 aaPredicted RBP8.03□□□□□ -1.12
SRSF4-203ENST00000477193 NUBP1P53384 320 aa8.01□□□□□ -1.13
SRSF4-203ENST00000477193 HS6ST3Q8IZP7 471 aa8□□□□□ -1.13
SRSF4-203ENST00000477193 TRIM41Q8WV44 630 aa8□□□□□ -1.13
SRSF4-203ENST00000477193 GSE1Q14687 1217 aa7.96□□□□□ -1.14
SRSF4-203ENST00000477193 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms