RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
SFPQ-203ENST00000466213 AEBP2Q6ZN18 517 aaPredicted RBP19.93■□□□□ 0.78
SFPQ-203ENST00000466213 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.46
SFPQ-203ENST00000466213 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
SFPQ-203ENST00000466213 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
SFPQ-203ENST00000466213 ADRA2BP18089 450 aa15.72■□□□□ 0.11
SFPQ-203ENST00000466213 PPP6R1Q9UPN7 881 aa15.55■□□□□ 0.08
SFPQ-203ENST00000466213 FOXD1Q16676 465 aa15.44■□□□□ 0.06
SFPQ-203ENST00000466213 KCNA4P22459 653 aa15.4■□□□□ 0.06
SFPQ-203ENST00000466213 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
SFPQ-203ENST00000466213 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
SFPQ-203ENST00000466213 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
SFPQ-203ENST00000466213 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
SFPQ-203ENST00000466213 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
SFPQ-203ENST00000466213 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
SFPQ-203ENST00000466213 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
SFPQ-203ENST00000466213 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
SFPQ-203ENST00000466213 ZBTB22O15209 634 aa14.26□□□□□ -0.13
SFPQ-203ENST00000466213 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
SFPQ-203ENST00000466213 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
SFPQ-203ENST00000466213 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
SFPQ-203ENST00000466213 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
SFPQ-203ENST00000466213 MSH5O43196 834 aa13.86□□□□□ -0.19
SFPQ-203ENST00000466213 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
SFPQ-203ENST00000466213 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
SFPQ-203ENST00000466213 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
SFPQ-203ENST00000466213 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
SFPQ-203ENST00000466213 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
SFPQ-203ENST00000466213 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
SFPQ-203ENST00000466213 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
SFPQ-203ENST00000466213 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
SFPQ-203ENST00000466213 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
SFPQ-203ENST00000466213 ATXN8OSP0DMR3 200 aa13.25□□□□□ -0.29
SFPQ-203ENST00000466213 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
SFPQ-203ENST00000466213 FKBP8Q14318 412 aa13.22□□□□□ -0.29
SFPQ-203ENST00000466213 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
SFPQ-203ENST00000466213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.374e-12■□□□□ 10
SFPQ-203ENST00000466213 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
SFPQ-203ENST00000466213 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
SFPQ-203ENST00000466213 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
SFPQ-203ENST00000466213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
SFPQ-203ENST00000466213 HNRNPUL2Q1KMD3 747 aaKnown RBP12.64□□□□□ -0.39
SFPQ-203ENST00000466213 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
SFPQ-203ENST00000466213 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SFPQ-203ENST00000466213 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
SFPQ-203ENST00000466213 PROM2Q8N271 834 aa12.42□□□□□ -0.42
SFPQ-203ENST00000466213 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
SFPQ-203ENST00000466213 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
SFPQ-203ENST00000466213 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
SFPQ-203ENST00000466213 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
SFPQ-203ENST00000466213 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SFPQ-203ENST00000466213 APLP2Q06481 763 aa12.28□□□□□ -0.44
SFPQ-203ENST00000466213 PKD2Q13563 968 aa12.2□□□□□ -0.46
SFPQ-203ENST00000466213 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
SFPQ-203ENST00000466213 FBLN2P98095 1184 aa12.17□□□□□ -0.46
SFPQ-203ENST00000466213 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
SFPQ-203ENST00000466213 POLA2Q14181 598 aa12.15□□□□□ -0.46
SFPQ-203ENST00000466213 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
SFPQ-203ENST00000466213 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
SFPQ-203ENST00000466213 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
SFPQ-203ENST00000466213 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
SFPQ-203ENST00000466213 CAPN15O75808 1086 aa11.98□□□□□ -0.49
SFPQ-203ENST00000466213 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
SFPQ-203ENST00000466213 BCANQ96GW7 911 aa11.96□□□□□ -0.49
SFPQ-203ENST00000466213 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
SFPQ-203ENST00000466213 KDM2AQ9Y2K7 1162 aa11.94□□□□□ -0.5
SFPQ-203ENST00000466213 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
SFPQ-203ENST00000466213 ABCB7O75027 752 aa11.9□□□□□ -0.5
SFPQ-203ENST00000466213 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
SFPQ-203ENST00000466213 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
SFPQ-203ENST00000466213 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
SFPQ-203ENST00000466213 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
SFPQ-203ENST00000466213 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
SFPQ-203ENST00000466213 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
SFPQ-203ENST00000466213 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
SFPQ-203ENST00000466213 RGL2O15211 777 aa11.83□□□□□ -0.52
SFPQ-203ENST00000466213 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
SFPQ-203ENST00000466213 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
SFPQ-203ENST00000466213 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
SFPQ-203ENST00000466213 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.52
SFPQ-203ENST00000466213 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.52
SFPQ-203ENST00000466213 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.52
SFPQ-203ENST00000466213 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
SFPQ-203ENST00000466213 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
SFPQ-203ENST00000466213 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
SFPQ-203ENST00000466213 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
SFPQ-203ENST00000466213 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
SFPQ-203ENST00000466213 MIER1Q8N108 512 aa11.69□□□□□ -0.54
SFPQ-203ENST00000466213 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
SFPQ-203ENST00000466213 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
SFPQ-203ENST00000466213 DSG3P32926 999 aa11.68□□□□□ -0.54
SFPQ-203ENST00000466213 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
SFPQ-203ENST00000466213 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
SFPQ-203ENST00000466213 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
SFPQ-203ENST00000466213 CHGAP10645 457 aaKnown RBP11.61□□□□□ -0.55
SFPQ-203ENST00000466213 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
SFPQ-203ENST00000466213 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
SFPQ-203ENST00000466213 ABCC9O60706 1549 aa11.55□□□□□ -0.56
SFPQ-203ENST00000466213 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
SFPQ-203ENST00000466213 HS6ST3Q8IZP7 471 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms