RNA–Protein interactions for RNA: ENST00000461801.1

FXR1-205, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 410 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-205ENST00000461801 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
FXR1-205ENST00000461801 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
FXR1-205ENST00000461801 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
FXR1-205ENST00000461801 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
FXR1-205ENST00000461801 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
FXR1-205ENST00000461801 ADRA2BP18089 450 aa16.18■□□□□ 0.18
FXR1-205ENST00000461801 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
FXR1-205ENST00000461801 FOXD1Q16676 465 aa15.98■□□□□ 0.15
FXR1-205ENST00000461801 KCNA4P22459 653 aa15.82■□□□□ 0.12
FXR1-205ENST00000461801 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
FXR1-205ENST00000461801 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
FXR1-205ENST00000461801 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
FXR1-205ENST00000461801 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
FXR1-205ENST00000461801 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
FXR1-205ENST00000461801 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
FXR1-205ENST00000461801 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
FXR1-205ENST00000461801 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
FXR1-205ENST00000461801 ZBTB22O15209 634 aa14.61□□□□□ -0.07
FXR1-205ENST00000461801 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
FXR1-205ENST00000461801 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
FXR1-205ENST00000461801 MSH5O43196 834 aa14.33□□□□□ -0.12
FXR1-205ENST00000461801 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
FXR1-205ENST00000461801 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
FXR1-205ENST00000461801 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
FXR1-205ENST00000461801 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
FXR1-205ENST00000461801 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
FXR1-205ENST00000461801 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
FXR1-205ENST00000461801 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
FXR1-205ENST00000461801 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
FXR1-205ENST00000461801 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
FXR1-205ENST00000461801 AMER1Q5JTC6 1135 aaPredicted RBP13.64□□□□□ -0.23
FXR1-205ENST00000461801 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
FXR1-205ENST00000461801 FKBP8Q14318 412 aa13.58□□□□□ -0.24
FXR1-205ENST00000461801 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
FXR1-205ENST00000461801 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
FXR1-205ENST00000461801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.297e-6■□□□□ 10.8
FXR1-205ENST00000461801 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
FXR1-205ENST00000461801 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
FXR1-205ENST00000461801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
FXR1-205ENST00000461801 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
FXR1-205ENST00000461801 ZNF219Q9P2Y4 722 aaPredicted RBP12.97□□□□□ -0.33
FXR1-205ENST00000461801 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
FXR1-205ENST00000461801 MKRN4PQ13434 485 aaPredicted RBP12.81□□□□□ -0.36
FXR1-205ENST00000461801 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
FXR1-205ENST00000461801 APLP2Q06481 763 aa12.77□□□□□ -0.37
FXR1-205ENST00000461801 PROM2Q8N271 834 aa12.72□□□□□ -0.37
FXR1-205ENST00000461801 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
FXR1-205ENST00000461801 FBLN2P98095 1184 aa12.61□□□□□ -0.39
FXR1-205ENST00000461801 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
FXR1-205ENST00000461801 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
FXR1-205ENST00000461801 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
FXR1-205ENST00000461801 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
FXR1-205ENST00000461801 POLA2Q14181 598 aa12.56□□□□□ -0.4
FXR1-205ENST00000461801 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
FXR1-205ENST00000461801 PKD2Q13563 968 aa12.47□□□□□ -0.41
FXR1-205ENST00000461801 CAPN15O75808 1086 aa12.46□□□□□ -0.41
FXR1-205ENST00000461801 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
FXR1-205ENST00000461801 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
FXR1-205ENST00000461801 ABCB7O75027 752 aa12.35□□□□□ -0.43
FXR1-205ENST00000461801 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
FXR1-205ENST00000461801 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
FXR1-205ENST00000461801 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
FXR1-205ENST00000461801 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
FXR1-205ENST00000461801 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
FXR1-205ENST00000461801 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
FXR1-205ENST00000461801 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
FXR1-205ENST00000461801 BCANQ96GW7 911 aa12.2□□□□□ -0.46
FXR1-205ENST00000461801 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
FXR1-205ENST00000461801 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
FXR1-205ENST00000461801 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
FXR1-205ENST00000461801 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
FXR1-205ENST00000461801 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
FXR1-205ENST00000461801 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
FXR1-205ENST00000461801 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
FXR1-205ENST00000461801 RGL2O15211 777 aa12.12□□□□□ -0.47
FXR1-205ENST00000461801 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
FXR1-205ENST00000461801 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
FXR1-205ENST00000461801 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
FXR1-205ENST00000461801 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 DSG3P32926 999 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
FXR1-205ENST00000461801 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
FXR1-205ENST00000461801 MIER1Q8N108 512 aa12.06□□□□□ -0.48
FXR1-205ENST00000461801 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
FXR1-205ENST00000461801 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
FXR1-205ENST00000461801 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
FXR1-205ENST00000461801 CIZ1Q9ULV3 898 aaPredicted RBP11.96□□□□□ -0.49
FXR1-205ENST00000461801 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
FXR1-205ENST00000461801 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
FXR1-205ENST00000461801 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
FXR1-205ENST00000461801 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
FXR1-205ENST00000461801 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
FXR1-205ENST00000461801 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
FXR1-205ENST00000461801 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
FXR1-205ENST00000461801 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
FXR1-205ENST00000461801 NUBP1P53384 320 aa11.71□□□□□ -0.53
FXR1-205ENST00000461801 GSE1Q14687 1217 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms