RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
C1DP3-201ENST00000455013 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
C1DP3-201ENST00000455013 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
C1DP3-201ENST00000455013 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
C1DP3-201ENST00000455013 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
C1DP3-201ENST00000455013 FOXD1Q16676 465 aa18.61■□□□□ 0.57
C1DP3-201ENST00000455013 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
C1DP3-201ENST00000455013 ADRA2BP18089 450 aa17.84■□□□□ 0.45
C1DP3-201ENST00000455013 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
C1DP3-201ENST00000455013 MSH5O43196 834 aa17.2■□□□□ 0.34
C1DP3-201ENST00000455013 KCNA4P22459 653 aa16.9■□□□□ 0.3
C1DP3-201ENST00000455013 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
C1DP3-201ENST00000455013 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
C1DP3-201ENST00000455013 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
C1DP3-201ENST00000455013 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
C1DP3-201ENST00000455013 SLC4A1APQ9BWU0 796 aaKnown RBP16.26■□□□□ 0.19
C1DP3-201ENST00000455013 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
C1DP3-201ENST00000455013 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
C1DP3-201ENST00000455013 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
C1DP3-201ENST00000455013 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
C1DP3-201ENST00000455013 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
C1DP3-201ENST00000455013 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
C1DP3-201ENST00000455013 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
C1DP3-201ENST00000455013 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
C1DP3-201ENST00000455013 POTEDQ86YR6 584 aa15.64■□□□□ 0.09
C1DP3-201ENST00000455013 ZBTB22O15209 634 aa15.57■□□□□ 0.08
C1DP3-201ENST00000455013 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
C1DP3-201ENST00000455013 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
C1DP3-201ENST00000455013 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
C1DP3-201ENST00000455013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
C1DP3-201ENST00000455013 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
C1DP3-201ENST00000455013 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
C1DP3-201ENST00000455013 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
C1DP3-201ENST00000455013 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
C1DP3-201ENST00000455013 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
C1DP3-201ENST00000455013 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
C1DP3-201ENST00000455013 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
C1DP3-201ENST00000455013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
C1DP3-201ENST00000455013 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
C1DP3-201ENST00000455013 FKBP8Q14318 412 aa14.49□□□□□ -0.09
C1DP3-201ENST00000455013 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
C1DP3-201ENST00000455013 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
C1DP3-201ENST00000455013 APLP2Q06481 763 aa14.39□□□□□ -0.11
C1DP3-201ENST00000455013 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
C1DP3-201ENST00000455013 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
C1DP3-201ENST00000455013 ATF5Q9Y2D1 282 aaPredicted RBP14.24□□□□□ -0.13
C1DP3-201ENST00000455013 CAPN15O75808 1086 aa14.17□□□□□ -0.14
C1DP3-201ENST00000455013 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
C1DP3-201ENST00000455013 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
C1DP3-201ENST00000455013 DSG3P32926 999 aa14□□□□□ -0.17
C1DP3-201ENST00000455013 POLA2Q14181 598 aa13.89□□□□□ -0.19
C1DP3-201ENST00000455013 ABCB7O75027 752 aa13.88□□□□□ -0.19
C1DP3-201ENST00000455013 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
C1DP3-201ENST00000455013 PROM2Q8N271 834 aa13.8□□□□□ -0.2
C1DP3-201ENST00000455013 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
C1DP3-201ENST00000455013 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
C1DP3-201ENST00000455013 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
C1DP3-201ENST00000455013 FBLN2P98095 1184 aa13.68□□□□□ -0.22
C1DP3-201ENST00000455013 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
C1DP3-201ENST00000455013 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
C1DP3-201ENST00000455013 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
C1DP3-201ENST00000455013 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
C1DP3-201ENST00000455013 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
C1DP3-201ENST00000455013 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
C1DP3-201ENST00000455013 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
C1DP3-201ENST00000455013 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
C1DP3-201ENST00000455013 PKD2Q13563 968 aa13.33□□□□□ -0.28
C1DP3-201ENST00000455013 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
C1DP3-201ENST00000455013 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
C1DP3-201ENST00000455013 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
C1DP3-201ENST00000455013 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
C1DP3-201ENST00000455013 SPOCK2Q92563 424 aa13.21□□□□□ -0.29
C1DP3-201ENST00000455013 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
C1DP3-201ENST00000455013 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
C1DP3-201ENST00000455013 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
C1DP3-201ENST00000455013 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
C1DP3-201ENST00000455013 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
C1DP3-201ENST00000455013 BCANQ96GW7 911 aa13.08□□□□□ -0.32
C1DP3-201ENST00000455013 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
C1DP3-201ENST00000455013 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
C1DP3-201ENST00000455013 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
C1DP3-201ENST00000455013 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
C1DP3-201ENST00000455013 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
C1DP3-201ENST00000455013 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
C1DP3-201ENST00000455013 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
C1DP3-201ENST00000455013 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
C1DP3-201ENST00000455013 RGL2O15211 777 aa12.92□□□□□ -0.34
C1DP3-201ENST00000455013 MIER1Q8N108 512 aa12.92□□□□□ -0.34
C1DP3-201ENST00000455013 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
C1DP3-201ENST00000455013 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
C1DP3-201ENST00000455013 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
C1DP3-201ENST00000455013 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
C1DP3-201ENST00000455013 KDM2AQ9Y2K7 1162 aa12.85□□□□□ -0.35
C1DP3-201ENST00000455013 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
C1DP3-201ENST00000455013 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
C1DP3-201ENST00000455013 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
C1DP3-201ENST00000455013 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
C1DP3-201ENST00000455013 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
C1DP3-201ENST00000455013 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
C1DP3-201ENST00000455013 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms