RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
HMGN3P1-201ENST00000453847 AEBP2Q6ZN18 517 aaPredicted RBP15.82■□□□□ 0.12
HMGN3P1-201ENST00000453847 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
HMGN3P1-201ENST00000453847 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
HMGN3P1-201ENST00000453847 SENP3Q9H4L4 574 aaPredicted RBP13.12□□□□□ -0.31
HMGN3P1-201ENST00000453847 ADRA2BP18089 450 aa12.45□□□□□ -0.42
HMGN3P1-201ENST00000453847 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
HMGN3P1-201ENST00000453847 FOXD1Q16676 465 aa12.23□□□□□ -0.45
HMGN3P1-201ENST00000453847 KCNA4P22459 653 aa12.18□□□□□ -0.46
HMGN3P1-201ENST00000453847 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
HMGN3P1-201ENST00000453847 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
HMGN3P1-201ENST00000453847 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
HMGN3P1-201ENST00000453847 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
HMGN3P1-201ENST00000453847 PIAS4Q8N2W9 510 aaPredicted RBP11.58□□□□□ -0.56
HMGN3P1-201ENST00000453847 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
HMGN3P1-201ENST00000453847 NPM3O75607 178 aaKnown RBP11.44□□□□□ -0.58
HMGN3P1-201ENST00000453847 ZBTB22O15209 634 aa11.29□□□□□ -0.6
HMGN3P1-201ENST00000453847 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
HMGN3P1-201ENST00000453847 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
HMGN3P1-201ENST00000453847 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.65
HMGN3P1-201ENST00000453847 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
HMGN3P1-201ENST00000453847 FOXD4L1Q9NU39 408 aa10.94□□□□□ -0.66
HMGN3P1-201ENST00000453847 MSH5O43196 834 aa10.89□□□□□ -0.67
HMGN3P1-201ENST00000453847 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
HMGN3P1-201ENST00000453847 SLC4A2P04920 1241 aa10.71□□□□□ -0.69
HMGN3P1-201ENST00000453847 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
HMGN3P1-201ENST00000453847 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
HMGN3P1-201ENST00000453847 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
HMGN3P1-201ENST00000453847 SLC24A1O60721 1099 aa10.51□□□□□ -0.73
HMGN3P1-201ENST00000453847 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
HMGN3P1-201ENST00000453847 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
HMGN3P1-201ENST00000453847 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
HMGN3P1-201ENST00000453847 FKBP8Q14318 412 aa10.43□□□□□ -0.74
HMGN3P1-201ENST00000453847 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
HMGN3P1-201ENST00000453847 U3KPZ7 1027 aaPredicted RBP10.09□□□□□ -0.79
HMGN3P1-201ENST00000453847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
HMGN3P1-201ENST00000453847 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
HMGN3P1-201ENST00000453847 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
HMGN3P1-201ENST00000453847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
HMGN3P1-201ENST00000453847 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
HMGN3P1-201ENST00000453847 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
HMGN3P1-201ENST00000453847 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
HMGN3P1-201ENST00000453847 PROM2Q8N271 834 aa9.84□□□□□ -0.83
HMGN3P1-201ENST00000453847 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
HMGN3P1-201ENST00000453847 FBXO3Q9UK99 471 aa9.78□□□□□ -0.84
HMGN3P1-201ENST00000453847 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
HMGN3P1-201ENST00000453847 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
HMGN3P1-201ENST00000453847 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
HMGN3P1-201ENST00000453847 APLP2Q06481 763 aa9.68□□□□□ -0.86
HMGN3P1-201ENST00000453847 PKD2Q13563 968 aa9.65□□□□□ -0.86
HMGN3P1-201ENST00000453847 SPINK5Q9NQ38 1064 aaPredicted RBP9.65□□□□□ -0.86
HMGN3P1-201ENST00000453847 POLA2Q14181 598 aa9.61□□□□□ -0.87
HMGN3P1-201ENST00000453847 FBLN2P98095 1184 aa9.6□□□□□ -0.87
HMGN3P1-201ENST00000453847 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
HMGN3P1-201ENST00000453847 HAP1P54257 671 aaPredicted RBP9.56□□□□□ -0.88
HMGN3P1-201ENST00000453847 DCAF8L2P0C7V8 631 aa9.5□□□□□ -0.89
HMGN3P1-201ENST00000453847 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
HMGN3P1-201ENST00000453847 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
HMGN3P1-201ENST00000453847 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMGN3P1-201ENST00000453847 CAPN15O75808 1086 aa9.46□□□□□ -0.9
HMGN3P1-201ENST00000453847 VSIG10Q8N0Z9 540 aa9.45□□□□□ -0.9
HMGN3P1-201ENST00000453847 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
HMGN3P1-201ENST00000453847 BCANQ96GW7 911 aa9.41□□□□□ -0.9
HMGN3P1-201ENST00000453847 ABCB7O75027 752 aa9.4□□□□□ -0.9
HMGN3P1-201ENST00000453847 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
HMGN3P1-201ENST00000453847 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
HMGN3P1-201ENST00000453847 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
HMGN3P1-201ENST00000453847 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
HMGN3P1-201ENST00000453847 KLHL34Q8N239 644 aa9.35□□□□□ -0.91
HMGN3P1-201ENST00000453847 ZBTB12Q9Y330 459 aaPredicted RBP9.35□□□□□ -0.91
HMGN3P1-201ENST00000453847 RGL2O15211 777 aa9.34□□□□□ -0.91
HMGN3P1-201ENST00000453847 C1QBPQ07021 282 aaKnown RBP9.34□□□□□ -0.91
HMGN3P1-201ENST00000453847 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
HMGN3P1-201ENST00000453847 ZNF692Q9BU19 519 aaPredicted RBP9.31□□□□□ -0.92
HMGN3P1-201ENST00000453847 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
HMGN3P1-201ENST00000453847 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
HMGN3P1-201ENST00000453847 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
HMGN3P1-201ENST00000453847 CFAP44Q96MT7 982 aa9.28□□□□□ -0.92
HMGN3P1-201ENST00000453847 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
HMGN3P1-201ENST00000453847 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
HMGN3P1-201ENST00000453847 DSG3P32926 999 aa9.25□□□□□ -0.93
HMGN3P1-201ENST00000453847 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGN3P1-201ENST00000453847 PLCD3Q8N3E9 789 aa9.23□□□□□ -0.93
HMGN3P1-201ENST00000453847 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
HMGN3P1-201ENST00000453847 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
HMGN3P1-201ENST00000453847 SPDYE2Q495Y8 402 aa9.22□□□□□ -0.93
HMGN3P1-201ENST00000453847 TPRNQ4KMQ1 711 aa9.22□□□□□ -0.93
HMGN3P1-201ENST00000453847 MIER1Q8N108 512 aa9.22□□□□□ -0.93
HMGN3P1-201ENST00000453847 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
HMGN3P1-201ENST00000453847 CHGAP10645 457 aaKnown RBP9.15□□□□□ -0.94
HMGN3P1-201ENST00000453847 DNAJC5Q9H3Z4 198 aa9.15□□□□□ -0.94
HMGN3P1-201ENST00000453847 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
HMGN3P1-201ENST00000453847 RNF25Q96BH1 459 aaPredicted RBP9.1□□□□□ -0.95
HMGN3P1-201ENST00000453847 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
HMGN3P1-201ENST00000453847 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
HMGN3P1-201ENST00000453847 NUBP1P53384 320 aa9.02□□□□□ -0.97
HMGN3P1-201ENST00000453847 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
HMGN3P1-201ENST00000453847 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
HMGN3P1-201ENST00000453847 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
HMGN3P1-201ENST00000453847 PLEKHG5O94827 1062 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms