RNA–Protein interactions for RNA: ENST00000441146.1

GK-IT1-201, GK intronic transcript 1, humanhuman

TSL 5 BASIC

Gene GK-IT1, Length 397 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GK-IT1-201ENST00000441146 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
GK-IT1-201ENST00000441146 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
GK-IT1-201ENST00000441146 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
GK-IT1-201ENST00000441146 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
GK-IT1-201ENST00000441146 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
GK-IT1-201ENST00000441146 ADRA2BP18089 450 aa18.29■□□□□ 0.52
GK-IT1-201ENST00000441146 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
GK-IT1-201ENST00000441146 KCNA4P22459 653 aa18.04■□□□□ 0.48
GK-IT1-201ENST00000441146 FOXD1Q16676 465 aa17.97■□□□□ 0.47
GK-IT1-201ENST00000441146 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
GK-IT1-201ENST00000441146 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
GK-IT1-201ENST00000441146 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
GK-IT1-201ENST00000441146 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
GK-IT1-201ENST00000441146 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
GK-IT1-201ENST00000441146 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
GK-IT1-201ENST00000441146 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
GK-IT1-201ENST00000441146 ZBTB22O15209 634 aa16.65■□□□□ 0.26
GK-IT1-201ENST00000441146 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
GK-IT1-201ENST00000441146 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
GK-IT1-201ENST00000441146 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
GK-IT1-201ENST00000441146 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
GK-IT1-201ENST00000441146 MSH5O43196 834 aa16.15■□□□□ 0.18
GK-IT1-201ENST00000441146 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
GK-IT1-201ENST00000441146 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
GK-IT1-201ENST00000441146 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
GK-IT1-201ENST00000441146 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
GK-IT1-201ENST00000441146 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
GK-IT1-201ENST00000441146 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
GK-IT1-201ENST00000441146 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
GK-IT1-201ENST00000441146 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
GK-IT1-201ENST00000441146 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
GK-IT1-201ENST00000441146 ATXN8OSP0DMR3 200 aa15.66■□□□□ 0.1
GK-IT1-201ENST00000441146 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
GK-IT1-201ENST00000441146 FKBP8Q14318 412 aa15.57■□□□□ 0.08
GK-IT1-201ENST00000441146 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
GK-IT1-201ENST00000441146 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
GK-IT1-201ENST00000441146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
GK-IT1-201ENST00000441146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
GK-IT1-201ENST00000441146 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
GK-IT1-201ENST00000441146 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
GK-IT1-201ENST00000441146 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
GK-IT1-201ENST00000441146 ZNF219Q9P2Y4 722 aaPredicted RBP14.76□□□□□ -0.05
GK-IT1-201ENST00000441146 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
GK-IT1-201ENST00000441146 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
GK-IT1-201ENST00000441146 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
GK-IT1-201ENST00000441146 APLP2Q06481 763 aa14.58□□□□□ -0.08
GK-IT1-201ENST00000441146 PROM2Q8N271 834 aa14.58□□□□□ -0.08
GK-IT1-201ENST00000441146 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
GK-IT1-201ENST00000441146 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
GK-IT1-201ENST00000441146 IFNLR1Q8IU57 520 aaPredicted RBP14.43□□□□□ -0.1
GK-IT1-201ENST00000441146 HAP1P54257 671 aaPredicted RBP14.4□□□□□ -0.1
GK-IT1-201ENST00000441146 FBLN2P98095 1184 aa14.38□□□□□ -0.11
GK-IT1-201ENST00000441146 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
GK-IT1-201ENST00000441146 PKD2Q13563 968 aa14.32□□□□□ -0.12
GK-IT1-201ENST00000441146 BCANQ96GW7 911 aa14.26□□□□□ -0.13
GK-IT1-201ENST00000441146 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
GK-IT1-201ENST00000441146 POLA2Q14181 598 aa14.23□□□□□ -0.13
GK-IT1-201ENST00000441146 VSIG10Q8N0Z9 540 aa14.23□□□□□ -0.13
GK-IT1-201ENST00000441146 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
GK-IT1-201ENST00000441146 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
GK-IT1-201ENST00000441146 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
GK-IT1-201ENST00000441146 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
GK-IT1-201ENST00000441146 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
GK-IT1-201ENST00000441146 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
GK-IT1-201ENST00000441146 CAPN15O75808 1086 aa14.05□□□□□ -0.16
GK-IT1-201ENST00000441146 ECM2O94769 699 aaPredicted RBP14.03□□□□□ -0.16
GK-IT1-201ENST00000441146 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
GK-IT1-201ENST00000441146 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
GK-IT1-201ENST00000441146 NISCHQ9Y2I1 1504 aa14.03□□□□□ -0.16
GK-IT1-201ENST00000441146 KDM2AQ9Y2K7 1162 aa14.02□□□□□ -0.17
GK-IT1-201ENST00000441146 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
GK-IT1-201ENST00000441146 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
GK-IT1-201ENST00000441146 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
GK-IT1-201ENST00000441146 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
GK-IT1-201ENST00000441146 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
GK-IT1-201ENST00000441146 ABCB7O75027 752 aa13.89□□□□□ -0.19
GK-IT1-201ENST00000441146 RGL2O15211 777 aa13.88□□□□□ -0.19
GK-IT1-201ENST00000441146 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
GK-IT1-201ENST00000441146 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
GK-IT1-201ENST00000441146 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
GK-IT1-201ENST00000441146 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
GK-IT1-201ENST00000441146 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
GK-IT1-201ENST00000441146 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
GK-IT1-201ENST00000441146 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
GK-IT1-201ENST00000441146 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
GK-IT1-201ENST00000441146 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
GK-IT1-201ENST00000441146 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
GK-IT1-201ENST00000441146 MIER1Q8N108 512 aa13.76□□□□□ -0.21
GK-IT1-201ENST00000441146 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
GK-IT1-201ENST00000441146 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
GK-IT1-201ENST00000441146 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
GK-IT1-201ENST00000441146 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
GK-IT1-201ENST00000441146 DSG3P32926 999 aa13.63□□□□□ -0.23
GK-IT1-201ENST00000441146 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
GK-IT1-201ENST00000441146 ABCC9O60706 1549 aa13.63□□□□□ -0.23
GK-IT1-201ENST00000441146 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
GK-IT1-201ENST00000441146 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
GK-IT1-201ENST00000441146 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
GK-IT1-201ENST00000441146 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
GK-IT1-201ENST00000441146 NBR1Q14596 966 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms