RNA–Protein interactions for RNA: ENST00000440430.1

AC003685.1-201, humanhuman

TSL 2 BASIC

Gene AC003685.1, Length 466 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003685.1-201ENST00000440430 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
AC003685.1-201ENST00000440430 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
AC003685.1-201ENST00000440430 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
AC003685.1-201ENST00000440430 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
AC003685.1-201ENST00000440430 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
AC003685.1-201ENST00000440430 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
AC003685.1-201ENST00000440430 KCNA4P22459 653 aa15.29■□□□□ 0.04
AC003685.1-201ENST00000440430 ADRA2BP18089 450 aa15.2■□□□□ 0.02
AC003685.1-201ENST00000440430 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
AC003685.1-201ENST00000440430 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
AC003685.1-201ENST00000440430 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
AC003685.1-201ENST00000440430 FOXD1Q16676 465 aa14.57□□□□□ -0.08
AC003685.1-201ENST00000440430 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
AC003685.1-201ENST00000440430 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
AC003685.1-201ENST00000440430 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
AC003685.1-201ENST00000440430 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
AC003685.1-201ENST00000440430 ZBTB22O15209 634 aa14.12□□□□□ -0.15
AC003685.1-201ENST00000440430 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
AC003685.1-201ENST00000440430 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
AC003685.1-201ENST00000440430 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
AC003685.1-201ENST00000440430 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
AC003685.1-201ENST00000440430 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
AC003685.1-201ENST00000440430 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
AC003685.1-201ENST00000440430 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
AC003685.1-201ENST00000440430 FKBP8Q14318 412 aa13.37□□□□□ -0.27
AC003685.1-201ENST00000440430 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
AC003685.1-201ENST00000440430 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
AC003685.1-201ENST00000440430 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
AC003685.1-201ENST00000440430 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
AC003685.1-201ENST00000440430 MYCNP04198 464 aaPredicted RBP13.02□□□□□ -0.33
AC003685.1-201ENST00000440430 MSH5O43196 834 aa12.97□□□□□ -0.33
AC003685.1-201ENST00000440430 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
AC003685.1-201ENST00000440430 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
AC003685.1-201ENST00000440430 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
AC003685.1-201ENST00000440430 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
AC003685.1-201ENST00000440430 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
AC003685.1-201ENST00000440430 BCANQ96GW7 911 aa12.67□□□□□ -0.38
AC003685.1-201ENST00000440430 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
AC003685.1-201ENST00000440430 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
AC003685.1-201ENST00000440430 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
AC003685.1-201ENST00000440430 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
AC003685.1-201ENST00000440430 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
AC003685.1-201ENST00000440430 SAMD1Q6SPF0 538 aaPredicted RBP12.41□□□□□ -0.42
AC003685.1-201ENST00000440430 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
AC003685.1-201ENST00000440430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
AC003685.1-201ENST00000440430 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
AC003685.1-201ENST00000440430 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
AC003685.1-201ENST00000440430 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
AC003685.1-201ENST00000440430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
AC003685.1-201ENST00000440430 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
AC003685.1-201ENST00000440430 PKD2Q13563 968 aa12.31□□□□□ -0.44
AC003685.1-201ENST00000440430 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
AC003685.1-201ENST00000440430 PROM2Q8N271 834 aa12.28□□□□□ -0.44
AC003685.1-201ENST00000440430 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
AC003685.1-201ENST00000440430 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
AC003685.1-201ENST00000440430 FBLN2P98095 1184 aa12.23□□□□□ -0.45
AC003685.1-201ENST00000440430 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
AC003685.1-201ENST00000440430 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.45
AC003685.1-201ENST00000440430 BBXQ8WY36 941 aaPredicted RBP12.18□□□□□ -0.46
AC003685.1-201ENST00000440430 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
AC003685.1-201ENST00000440430 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
AC003685.1-201ENST00000440430 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
AC003685.1-201ENST00000440430 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC003685.1-201ENST00000440430 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
AC003685.1-201ENST00000440430 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
AC003685.1-201ENST00000440430 APLP2Q06481 763 aa11.99□□□□□ -0.49
AC003685.1-201ENST00000440430 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
AC003685.1-201ENST00000440430 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
AC003685.1-201ENST00000440430 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
AC003685.1-201ENST00000440430 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
AC003685.1-201ENST00000440430 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
AC003685.1-201ENST00000440430 RGL2O15211 777 aa11.91□□□□□ -0.5
AC003685.1-201ENST00000440430 NBR1Q14596 966 aa11.9□□□□□ -0.5
AC003685.1-201ENST00000440430 GTF3C3Q9Y5Q9 886 aa11.85□□□□□ -0.51
AC003685.1-201ENST00000440430 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
AC003685.1-201ENST00000440430 ARXQ96QS3 562 aa11.83□□□□□ -0.52
AC003685.1-201ENST00000440430 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
AC003685.1-201ENST00000440430 CHGAP10645 457 aaKnown RBP11.78□□□□□ -0.52
AC003685.1-201ENST00000440430 POLA2Q14181 598 aa11.75□□□□□ -0.53
AC003685.1-201ENST00000440430 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
AC003685.1-201ENST00000440430 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
AC003685.1-201ENST00000440430 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
AC003685.1-201ENST00000440430 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
AC003685.1-201ENST00000440430 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
AC003685.1-201ENST00000440430 TMEM132AQ24JP5 1023 aa11.63□□□□□ -0.55
AC003685.1-201ENST00000440430 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
AC003685.1-201ENST00000440430 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
AC003685.1-201ENST00000440430 MIER1Q8N108 512 aa11.6□□□□□ -0.55
AC003685.1-201ENST00000440430 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
AC003685.1-201ENST00000440430 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
AC003685.1-201ENST00000440430 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
AC003685.1-201ENST00000440430 CAPN15O75808 1086 aa11.51□□□□□ -0.57
AC003685.1-201ENST00000440430 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
AC003685.1-201ENST00000440430 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
AC003685.1-201ENST00000440430 NKX1-1Q15270 411 aaPredicted RBP11.47□□□□□ -0.57
AC003685.1-201ENST00000440430 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
AC003685.1-201ENST00000440430 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
AC003685.1-201ENST00000440430 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
AC003685.1-201ENST00000440430 ABCB7O75027 752 aa11.43□□□□□ -0.58
AC003685.1-201ENST00000440430 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms