RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
HMGB3P10-201ENST00000434734 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
HMGB3P10-201ENST00000434734 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
HMGB3P10-201ENST00000434734 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
HMGB3P10-201ENST00000434734 FOXD1Q16676 465 aa15.09■□□□□ 0.01
HMGB3P10-201ENST00000434734 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
HMGB3P10-201ENST00000434734 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
HMGB3P10-201ENST00000434734 ADRA2BP18089 450 aa14.25□□□□□ -0.13
HMGB3P10-201ENST00000434734 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
HMGB3P10-201ENST00000434734 MSH5O43196 834 aa14.11□□□□□ -0.15
HMGB3P10-201ENST00000434734 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
HMGB3P10-201ENST00000434734 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
HMGB3P10-201ENST00000434734 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
HMGB3P10-201ENST00000434734 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
HMGB3P10-201ENST00000434734 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
HMGB3P10-201ENST00000434734 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
HMGB3P10-201ENST00000434734 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
HMGB3P10-201ENST00000434734 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
HMGB3P10-201ENST00000434734 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
HMGB3P10-201ENST00000434734 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
HMGB3P10-201ENST00000434734 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
HMGB3P10-201ENST00000434734 KCNA4P22459 653 aa12.37□□□□□ -0.43
HMGB3P10-201ENST00000434734 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
HMGB3P10-201ENST00000434734 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
HMGB3P10-201ENST00000434734 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
HMGB3P10-201ENST00000434734 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
HMGB3P10-201ENST00000434734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMGB3P10-201ENST00000434734 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
HMGB3P10-201ENST00000434734 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
HMGB3P10-201ENST00000434734 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
HMGB3P10-201ENST00000434734 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
HMGB3P10-201ENST00000434734 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
HMGB3P10-201ENST00000434734 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
HMGB3P10-201ENST00000434734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
HMGB3P10-201ENST00000434734 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
HMGB3P10-201ENST00000434734 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
HMGB3P10-201ENST00000434734 APLP2Q06481 763 aa11.57□□□□□ -0.56
HMGB3P10-201ENST00000434734 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
HMGB3P10-201ENST00000434734 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
HMGB3P10-201ENST00000434734 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
HMGB3P10-201ENST00000434734 CAPN15O75808 1086 aa11.45□□□□□ -0.58
HMGB3P10-201ENST00000434734 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
HMGB3P10-201ENST00000434734 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
HMGB3P10-201ENST00000434734 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
HMGB3P10-201ENST00000434734 ZBTB22O15209 634 aa11.36□□□□□ -0.59
HMGB3P10-201ENST00000434734 DSG3P32926 999 aa11.34□□□□□ -0.59
HMGB3P10-201ENST00000434734 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
HMGB3P10-201ENST00000434734 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
HMGB3P10-201ENST00000434734 ABCB7O75027 752 aa11.15□□□□□ -0.62
HMGB3P10-201ENST00000434734 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
HMGB3P10-201ENST00000434734 POLA2Q14181 598 aa11.09□□□□□ -0.63
HMGB3P10-201ENST00000434734 ZBTB12Q9Y330 459 aaPredicted RBP10.99□□□□□ -0.65
HMGB3P10-201ENST00000434734 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
HMGB3P10-201ENST00000434734 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
HMGB3P10-201ENST00000434734 FBLN2P98095 1184 aa10.79□□□□□ -0.68
HMGB3P10-201ENST00000434734 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
HMGB3P10-201ENST00000434734 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
HMGB3P10-201ENST00000434734 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
HMGB3P10-201ENST00000434734 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
HMGB3P10-201ENST00000434734 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
HMGB3P10-201ENST00000434734 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
HMGB3P10-201ENST00000434734 FKBP8Q14318 412 aa10.58□□□□□ -0.72
HMGB3P10-201ENST00000434734 POTEHQ6S545 545 aa10.58□□□□□ -0.72
HMGB3P10-201ENST00000434734 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
HMGB3P10-201ENST00000434734 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
HMGB3P10-201ENST00000434734 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
HMGB3P10-201ENST00000434734 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
HMGB3P10-201ENST00000434734 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
HMGB3P10-201ENST00000434734 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
HMGB3P10-201ENST00000434734 BCANQ96GW7 911 aa10.49□□□□□ -0.73
HMGB3P10-201ENST00000434734 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
HMGB3P10-201ENST00000434734 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
HMGB3P10-201ENST00000434734 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
HMGB3P10-201ENST00000434734 TPRNQ4KMQ1 711 aa10.39□□□□□ -0.75
HMGB3P10-201ENST00000434734 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
HMGB3P10-201ENST00000434734 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
HMGB3P10-201ENST00000434734 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGB3P10-201ENST00000434734 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
HMGB3P10-201ENST00000434734 FXR2P51116 673 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGB3P10-201ENST00000434734 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
HMGB3P10-201ENST00000434734 ARXQ96QS3 562 aa10.26□□□□□ -0.77
HMGB3P10-201ENST00000434734 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
HMGB3P10-201ENST00000434734 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
HMGB3P10-201ENST00000434734 STAG3Q9UJ98 1225 aa10.21□□□□□ -0.77
HMGB3P10-201ENST00000434734 PRR29P0C7W0 189 aa10.19□□□□□ -0.78
HMGB3P10-201ENST00000434734 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
HMGB3P10-201ENST00000434734 PROM2Q8N271 834 aa10.17□□□□□ -0.78
HMGB3P10-201ENST00000434734 PRKAR2AP13861 404 aaKnown RBP10.12□□□□□ -0.79
HMGB3P10-201ENST00000434734 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
HMGB3P10-201ENST00000434734 DCAF8L2P0C7V8 631 aa10.04□□□□□ -0.8
HMGB3P10-201ENST00000434734 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
HMGB3P10-201ENST00000434734 HAX1O00165 279 aa10.01□□□□□ -0.81
HMGB3P10-201ENST00000434734 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
HMGB3P10-201ENST00000434734 HOMEZQ8IX15 550 aa10.01□□□□□ -0.81
HMGB3P10-201ENST00000434734 CREBZFQ9NS37 354 aa9.97□□□□□ -0.81
HMGB3P10-201ENST00000434734 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P10-201ENST00000434734 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
HMGB3P10-201ENST00000434734 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P10-201ENST00000434734 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
HMGB3P10-201ENST00000434734 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms