RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
LINC00317-201ENST00000419069 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
LINC00317-201ENST00000419069 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
LINC00317-201ENST00000419069 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
LINC00317-201ENST00000419069 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
LINC00317-201ENST00000419069 FOXD1Q16676 465 aa18.57■□□□□ 0.56
LINC00317-201ENST00000419069 ADRA2BP18089 450 aa18.52■□□□□ 0.56
LINC00317-201ENST00000419069 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
LINC00317-201ENST00000419069 KCNA4P22459 653 aa18■□□□□ 0.47
LINC00317-201ENST00000419069 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
LINC00317-201ENST00000419069 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
LINC00317-201ENST00000419069 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
LINC00317-201ENST00000419069 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
LINC00317-201ENST00000419069 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
LINC00317-201ENST00000419069 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
LINC00317-201ENST00000419069 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
LINC00317-201ENST00000419069 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
LINC00317-201ENST00000419069 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
LINC00317-201ENST00000419069 MSH5O43196 834 aa16.88■□□□□ 0.29
LINC00317-201ENST00000419069 ZBTB22O15209 634 aa16.54■□□□□ 0.24
LINC00317-201ENST00000419069 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
LINC00317-201ENST00000419069 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
LINC00317-201ENST00000419069 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
LINC00317-201ENST00000419069 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
LINC00317-201ENST00000419069 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
LINC00317-201ENST00000419069 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
LINC00317-201ENST00000419069 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
LINC00317-201ENST00000419069 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
LINC00317-201ENST00000419069 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
LINC00317-201ENST00000419069 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
LINC00317-201ENST00000419069 FKBP8Q14318 412 aa15.45■□□□□ 0.06
LINC00317-201ENST00000419069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
LINC00317-201ENST00000419069 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
LINC00317-201ENST00000419069 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
LINC00317-201ENST00000419069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
LINC00317-201ENST00000419069 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
LINC00317-201ENST00000419069 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
LINC00317-201ENST00000419069 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
LINC00317-201ENST00000419069 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
LINC00317-201ENST00000419069 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
LINC00317-201ENST00000419069 APLP2Q06481 763 aa15.02■□□□□ -0
LINC00317-201ENST00000419069 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
LINC00317-201ENST00000419069 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
LINC00317-201ENST00000419069 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
LINC00317-201ENST00000419069 FBLN2P98095 1184 aa14.66□□□□□ -0.06
LINC00317-201ENST00000419069 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
LINC00317-201ENST00000419069 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
LINC00317-201ENST00000419069 SPINK5Q9NQ38 1064 aaPredicted RBP14.57□□□□□ -0.08
LINC00317-201ENST00000419069 CAPN15O75808 1086 aa14.54□□□□□ -0.08
LINC00317-201ENST00000419069 POLA2Q14181 598 aa14.54□□□□□ -0.08
LINC00317-201ENST00000419069 PROM2Q8N271 834 aa14.49□□□□□ -0.09
LINC00317-201ENST00000419069 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
LINC00317-201ENST00000419069 VASPP50552 380 aaPredicted RBP14.47□□□□□ -0.09
LINC00317-201ENST00000419069 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
LINC00317-201ENST00000419069 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
LINC00317-201ENST00000419069 ABCB7O75027 752 aa14.31□□□□□ -0.12
LINC00317-201ENST00000419069 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
LINC00317-201ENST00000419069 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
LINC00317-201ENST00000419069 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
LINC00317-201ENST00000419069 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
LINC00317-201ENST00000419069 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
LINC00317-201ENST00000419069 PKD2Q13563 968 aa14.09□□□□□ -0.15
LINC00317-201ENST00000419069 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
LINC00317-201ENST00000419069 DSG3P32926 999 aa14.04□□□□□ -0.16
LINC00317-201ENST00000419069 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
LINC00317-201ENST00000419069 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
LINC00317-201ENST00000419069 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
LINC00317-201ENST00000419069 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
LINC00317-201ENST00000419069 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
LINC00317-201ENST00000419069 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
LINC00317-201ENST00000419069 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
LINC00317-201ENST00000419069 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
LINC00317-201ENST00000419069 SSUH2Q9Y2M2 353 aa13.97□□□□□ -0.17
LINC00317-201ENST00000419069 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
LINC00317-201ENST00000419069 ECM2O94769 699 aaPredicted RBP13.93□□□□□ -0.18
LINC00317-201ENST00000419069 MIER1Q8N108 512 aa13.89□□□□□ -0.19
LINC00317-201ENST00000419069 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
LINC00317-201ENST00000419069 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
LINC00317-201ENST00000419069 BBXQ8WY36 941 aaPredicted RBP13.82□□□□□ -0.2
LINC00317-201ENST00000419069 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
LINC00317-201ENST00000419069 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
LINC00317-201ENST00000419069 RGL2O15211 777 aa13.74□□□□□ -0.21
LINC00317-201ENST00000419069 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
LINC00317-201ENST00000419069 BCANQ96GW7 911 aa13.72□□□□□ -0.21
LINC00317-201ENST00000419069 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC00317-201ENST00000419069 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
LINC00317-201ENST00000419069 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
LINC00317-201ENST00000419069 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
LINC00317-201ENST00000419069 SPRYD3Q8NCJ5 442 aa13.61□□□□□ -0.23
LINC00317-201ENST00000419069 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
LINC00317-201ENST00000419069 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
LINC00317-201ENST00000419069 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
LINC00317-201ENST00000419069 GSE1Q14687 1217 aa13.52□□□□□ -0.25
LINC00317-201ENST00000419069 SPDYE1Q8NFV5 336 aaPredicted RBP13.46□□□□□ -0.25
LINC00317-201ENST00000419069 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
LINC00317-201ENST00000419069 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
LINC00317-201ENST00000419069 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
LINC00317-201ENST00000419069 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
LINC00317-201ENST00000419069 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
LINC00317-201ENST00000419069 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms