RNA–Protein interactions for RNA: ENST00000415193.5

LINC01047-201, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5 BASIC

Gene LINC01047, Length 778 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-201ENST00000415193 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
LINC01047-201ENST00000415193 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
LINC01047-201ENST00000415193 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
LINC01047-201ENST00000415193 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
LINC01047-201ENST00000415193 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
LINC01047-201ENST00000415193 FOXD1Q16676 465 aa22.07■■□□□ 1.12
LINC01047-201ENST00000415193 MSH5O43196 834 aa21.11■□□□□ 0.97
LINC01047-201ENST00000415193 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
LINC01047-201ENST00000415193 PLPPR3Q6T4P5 718 aa20.2■□□□□ 0.82
LINC01047-201ENST00000415193 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
LINC01047-201ENST00000415193 ADRA2BP18089 450 aa19.72■□□□□ 0.75
LINC01047-201ENST00000415193 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
LINC01047-201ENST00000415193 KCNA4P22459 653 aa19.06■□□□□ 0.64
LINC01047-201ENST00000415193 CACNB1Q02641 598 aaPredicted RBP18.68■□□□□ 0.58
LINC01047-201ENST00000415193 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
LINC01047-201ENST00000415193 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LINC01047-201ENST00000415193 MAPK8IP2Q13387 824 aaPredicted RBP18.4■□□□□ 0.54
LINC01047-201ENST00000415193 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
LINC01047-201ENST00000415193 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
LINC01047-201ENST00000415193 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
LINC01047-201ENST00000415193 PPP4R3CPQ6ZMV5 832 aa17.95■□□□□ 0.46
LINC01047-201ENST00000415193 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
LINC01047-201ENST00000415193 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
LINC01047-201ENST00000415193 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
LINC01047-201ENST00000415193 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
LINC01047-201ENST00000415193 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
LINC01047-201ENST00000415193 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
LINC01047-201ENST00000415193 RTN4Q9NQC3 1192 aaKnown RBP17.58■□□□□ 0.4
LINC01047-201ENST00000415193 ZBTB22O15209 634 aa17.57■□□□□ 0.4
LINC01047-201ENST00000415193 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
LINC01047-201ENST00000415193 POTEHQ6S545 545 aa17.23■□□□□ 0.35
LINC01047-201ENST00000415193 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
LINC01047-201ENST00000415193 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
LINC01047-201ENST00000415193 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
LINC01047-201ENST00000415193 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
LINC01047-201ENST00000415193 FKBP8Q14318 412 aa16.69■□□□□ 0.26
LINC01047-201ENST00000415193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01047-201ENST00000415193 ATXN8OSP0DMR3 200 aa16.47■□□□□ 0.23
LINC01047-201ENST00000415193 DSG3P32926 999 aa16.41■□□□□ 0.22
LINC01047-201ENST00000415193 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
LINC01047-201ENST00000415193 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
LINC01047-201ENST00000415193 CAPN15O75808 1086 aa16.24■□□□□ 0.19
LINC01047-201ENST00000415193 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
LINC01047-201ENST00000415193 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
LINC01047-201ENST00000415193 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
LINC01047-201ENST00000415193 BCANQ96GW7 911 aa15.98■□□□□ 0.15
LINC01047-201ENST00000415193 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
LINC01047-201ENST00000415193 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
LINC01047-201ENST00000415193 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
LINC01047-201ENST00000415193 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
LINC01047-201ENST00000415193 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
LINC01047-201ENST00000415193 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
LINC01047-201ENST00000415193 ABCB7O75027 752 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
LINC01047-201ENST00000415193 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
LINC01047-201ENST00000415193 APLP2Q06481 763 aa15.72■□□□□ 0.11
LINC01047-201ENST00000415193 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
LINC01047-201ENST00000415193 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
LINC01047-201ENST00000415193 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
LINC01047-201ENST00000415193 TPRNQ4KMQ1 711 aa15.55■□□□□ 0.08
LINC01047-201ENST00000415193 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
LINC01047-201ENST00000415193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 VASPP50552 380 aaPredicted RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
LINC01047-201ENST00000415193 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
LINC01047-201ENST00000415193 PROM2Q8N271 834 aa15.39■□□□□ 0.05
LINC01047-201ENST00000415193 PKD2Q13563 968 aa15.38■□□□□ 0.05
LINC01047-201ENST00000415193 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
LINC01047-201ENST00000415193 IFNLR1Q8IU57 520 aaPredicted RBP15.37■□□□□ 0.05
LINC01047-201ENST00000415193 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
LINC01047-201ENST00000415193 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
LINC01047-201ENST00000415193 FBLN2P98095 1184 aa15.27■□□□□ 0.04
LINC01047-201ENST00000415193 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
LINC01047-201ENST00000415193 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
LINC01047-201ENST00000415193 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
LINC01047-201ENST00000415193 HAX1O00165 279 aa15.13■□□□□ 0.01
LINC01047-201ENST00000415193 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
LINC01047-201ENST00000415193 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC01047-201ENST00000415193 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
LINC01047-201ENST00000415193 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
LINC01047-201ENST00000415193 POLA2Q14181 598 aa15.1■□□□□ 0.01
LINC01047-201ENST00000415193 ECM2O94769 699 aaPredicted RBP15.05■□□□□ -0
LINC01047-201ENST00000415193 TULP1O00294 542 aaPredicted RBP15.03■□□□□ -0
LINC01047-201ENST00000415193 DAXXQ9UER7 740 aaPredicted RBP15.03■□□□□ -0
LINC01047-201ENST00000415193 SPRYD3Q8NCJ5 442 aa15.02■□□□□ -0
LINC01047-201ENST00000415193 ARXQ96QS3 562 aa15.01□□□□□ -0.01
LINC01047-201ENST00000415193 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
LINC01047-201ENST00000415193 SPOCK2Q92563 424 aa14.98□□□□□ -0.01
LINC01047-201ENST00000415193 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
LINC01047-201ENST00000415193 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
LINC01047-201ENST00000415193 NBR1Q14596 966 aa14.94□□□□□ -0.02
LINC01047-201ENST00000415193 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC01047-201ENST00000415193 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
LINC01047-201ENST00000415193 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
LINC01047-201ENST00000415193 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
LINC01047-201ENST00000415193 RGL2O15211 777 aa14.85□□□□□ -0.03
LINC01047-201ENST00000415193 EVX2Q03828 476 aa14.82□□□□□ -0.04
LINC01047-201ENST00000415193 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
LINC01047-201ENST00000415193 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms