RNA–Protein interactions for RNA: ENST00000413200.1

SRIP3-201, Transcript of sorcin pseudogene 3, humanhuman

BASIC

Gene SRIP3, Length 219 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRIP3-201ENST00000413200 AEBP2Q6ZN18 517 aaPredicted RBP8.75□□□□□ -1.01
SRIP3-201ENST00000413200 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
SRIP3-201ENST00000413200 PHF23Q9BUL5 403 aaPredicted RBP7.59□□□□□ -1.19
SRIP3-201ENST00000413200 SENP3Q9H4L4 574 aaPredicted RBP7.35□□□□□ -1.23
SRIP3-201ENST00000413200 PLPPR3Q6T4P5 718 aa7□□□□□ -1.29
SRIP3-201ENST00000413200 FOXD1Q16676 465 aa6.85□□□□□ -1.31
SRIP3-201ENST00000413200 PPP6R1Q9UPN7 881 aa6.69□□□□□ -1.34
SRIP3-201ENST00000413200 ADRA2BP18089 450 aa6.68□□□□□ -1.34
SRIP3-201ENST00000413200 PIAS4Q8N2W9 510 aaPredicted RBP6.47□□□□□ -1.37
SRIP3-201ENST00000413200 MSH5O43196 834 aa6.23□□□□□ -1.41
SRIP3-201ENST00000413200 KCNA4P22459 653 aa6.22□□□□□ -1.41
SRIP3-201ENST00000413200 PPP4R3CPQ6ZMV5 832 aa6.21□□□□□ -1.42
SRIP3-201ENST00000413200 EHMT2Q96KQ7 1210 aa6.16□□□□□ -1.42
SRIP3-201ENST00000413200 SCAF1Q9H7N4 1312 aaKnown RBP6.05□□□□□ -1.44
SRIP3-201ENST00000413200 MAPK8IP2Q13387 824 aaPredicted RBP6.05□□□□□ -1.44
SRIP3-201ENST00000413200 NCBP3Q53F19 620 aaKnown RBP6.04□□□□□ -1.44
SRIP3-201ENST00000413200 NPM3O75607 178 aaKnown RBP5.99□□□□□ -1.45
SRIP3-201ENST00000413200 CNKSR2Q8WXI2 1034 aa5.99□□□□□ -1.45
SRIP3-201ENST00000413200 CSRNP3Q8WYN3 585 aa5.94□□□□□ -1.46
SRIP3-201ENST00000413200 SLC4A1APQ9BWU0 796 aaKnown RBP5.93□□□□□ -1.46
SRIP3-201ENST00000413200 DMRT2Q9Y5R5 561 aa5.89□□□□□ -1.47
SRIP3-201ENST00000413200 RNF216Q9NWF9 866 aaPredicted RBP5.85□□□□□ -1.47
SRIP3-201ENST00000413200 HOXD11P31277 338 aaPredicted RBP5.8□□□□□ -1.48
SRIP3-201ENST00000413200 ZBTB22O15209 634 aa5.76□□□□□ -1.49
SRIP3-201ENST00000413200 DNAJC5BQ9UF47 199 aa5.73□□□□□ -1.49
SRIP3-201ENST00000413200 DCAF8L1A6NGE4 600 aa5.67□□□□□ -1.5
SRIP3-201ENST00000413200 SLC4A2P04920 1241 aa5.64□□□□□ -1.51
SRIP3-201ENST00000413200 FOXD4L1Q9NU39 408 aa5.63□□□□□ -1.51
SRIP3-201ENST00000413200 POTEDQ86YR6 584 aa5.56□□□□□ -1.52
SRIP3-201ENST00000413200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.54□□□□□ -1.52
SRIP3-201ENST00000413200 MYCNP04198 464 aaPredicted RBP5.5□□□□□ -1.53
SRIP3-201ENST00000413200 U3KPZ7 1027 aaPredicted RBP5.47□□□□□ -1.53
SRIP3-201ENST00000413200 RTN4Q9NQC3 1192 aaKnown RBP5.43□□□□□ -1.54
SRIP3-201ENST00000413200 ATF5Q9Y2D1 282 aaPredicted RBP5.41□□□□□ -1.54
SRIP3-201ENST00000413200 ATXN8OSP0DMR3 200 aa5.4□□□□□ -1.54
SRIP3-201ENST00000413200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.38□□□□□ -1.55
SRIP3-201ENST00000413200 HNRNPUL2Q1KMD3 747 aaKnown RBP5.38□□□□□ -1.55
SRIP3-201ENST00000413200 SAMD1Q6SPF0 538 aaPredicted RBP5.38□□□□□ -1.55
SRIP3-201ENST00000413200 RNF39Q9H2S5 420 aa5.37□□□□□ -1.55
SRIP3-201ENST00000413200 SLC24A1O60721 1099 aa5.35□□□□□ -1.55
SRIP3-201ENST00000413200 FKBP8Q14318 412 aa5.33□□□□□ -1.56
SRIP3-201ENST00000413200 AMER1Q5JTC6 1135 aaPredicted RBP5.33□□□□□ -1.56
SRIP3-201ENST00000413200 SPINK5Q9NQ38 1064 aaPredicted RBP5.31□□□□□ -1.56
SRIP3-201ENST00000413200 APLP2Q06481 763 aa5.29□□□□□ -1.56
SRIP3-201ENST00000413200 C1QBPQ07021 282 aaKnown RBP5.29□□□□□ -1.56
SRIP3-201ENST00000413200 TRHP20396 242 aaPredicted RBP5.28□□□□□ -1.56
SRIP3-201ENST00000413200 ZNF219Q9P2Y4 722 aaPredicted RBP5.28□□□□□ -1.56
SRIP3-201ENST00000413200 CAPN15O75808 1086 aa5.27□□□□□ -1.57
SRIP3-201ENST00000413200 ABCB7O75027 752 aa5.21□□□□□ -1.58
SRIP3-201ENST00000413200 POLA2Q14181 598 aa5.21□□□□□ -1.58
SRIP3-201ENST00000413200 CACNB1Q02641 598 aaPredicted RBP5.18□□□□□ -1.58
SRIP3-201ENST00000413200 MKRN4PQ13434 485 aaPredicted RBP5.16□□□□□ -1.58
SRIP3-201ENST00000413200 DSG3P32926 999 aa5.15□□□□□ -1.59
SRIP3-201ENST00000413200 FBLN2P98095 1184 aa5.12□□□□□ -1.59
SRIP3-201ENST00000413200 SPDYE4A6NLX3 237 aa5.07□□□□□ -1.6
SRIP3-201ENST00000413200 ZBTB12Q9Y330 459 aaPredicted RBP5.06□□□□□ -1.6
SRIP3-201ENST00000413200 OSCARQ8IYS5 282 aa5.03□□□□□ -1.6
SRIP3-201ENST00000413200 ZNF692Q9BU19 519 aaPredicted RBP4.99□□□□□ -1.61
SRIP3-201ENST00000413200 PROM2Q8N271 834 aa4.98□□□□□ -1.61
SRIP3-201ENST00000413200 VASPP50552 380 aaPredicted RBP4.97□□□□□ -1.61
SRIP3-201ENST00000413200 FBXO3Q9UK99 471 aa4.97□□□□□ -1.61
SRIP3-201ENST00000413200 SPDYE2BA6NHP3 402 aa4.96□□□□□ -1.62
SRIP3-201ENST00000413200 SPDYE6P0CI01 402 aa4.96□□□□□ -1.62
SRIP3-201ENST00000413200 SPDYE2Q495Y8 402 aa4.96□□□□□ -1.62
SRIP3-201ENST00000413200 PLCB2Q00722 1185 aa4.95□□□□□ -1.62
SRIP3-201ENST00000413200 IFNLR1Q8IU57 520 aaPredicted RBP4.95□□□□□ -1.62
SRIP3-201ENST00000413200 SSUH2Q9Y2M2 353 aa4.94□□□□□ -1.62
SRIP3-201ENST00000413200 PABPN1Q86U42 306 aaKnown RBP eCLIP4.93□□□□□ -1.62
SRIP3-201ENST00000413200 PKD2Q13563 968 aa4.91□□□□□ -1.62
SRIP3-201ENST00000413200 DCAF8L2P0C7V8 631 aa4.9□□□□□ -1.63
SRIP3-201ENST00000413200 HAP1P54257 671 aaPredicted RBP4.9□□□□□ -1.63
SRIP3-201ENST00000413200 RBM42Q9BTD8 480 aaKnown RBP4.86□□□□□ -1.63
SRIP3-201ENST00000413200 PRKCSHP14314 528 aaPredicted RBP4.85□□□□□ -1.63
SRIP3-201ENST00000413200 AKT1S1Q96B36 256 aa4.84□□□□□ -1.63
SRIP3-201ENST00000413200 STAG3Q9UJ98 1225 aa4.83□□□□□ -1.64
SRIP3-201ENST00000413200 NPM1P06748 294 aaKnown RBP eCLIP4.82□□□□□ -1.64
SRIP3-201ENST00000413200 REM2Q8IYK8 340 aaPredicted RBP4.82□□□□□ -1.64
SRIP3-201ENST00000413200 CLEC11AQ9Y240 323 aa4.81□□□□□ -1.64
SRIP3-201ENST00000413200 MIER1Q8N108 512 aa4.8□□□□□ -1.64
SRIP3-201ENST00000413200 PLCD3Q8N3E9 789 aa4.8□□□□□ -1.64
SRIP3-201ENST00000413200 SPDYE1Q8NFV5 336 aaPredicted RBP4.8□□□□□ -1.64
SRIP3-201ENST00000413200 KDM2AQ9Y2K7 1162 aa4.8□□□□□ -1.64
SRIP3-201ENST00000413200 VSIG10Q8N0Z9 540 aa4.79□□□□□ -1.64
SRIP3-201ENST00000413200 KLHL34Q8N239 644 aa4.79□□□□□ -1.64
SRIP3-201ENST00000413200 SPOCK2Q92563 424 aa4.79□□□□□ -1.64
SRIP3-201ENST00000413200 ECM2O94769 699 aaPredicted RBP4.78□□□□□ -1.64
SRIP3-201ENST00000413200 BCANQ96GW7 911 aa4.78□□□□□ -1.64
SRIP3-201ENST00000413200 PITPNM1O00562 1244 aa4.77□□□□□ -1.65
SRIP3-201ENST00000413200 RGL2O15211 777 aa4.77□□□□□ -1.65
SRIP3-201ENST00000413200 PAXIP1Q6ZW49 1069 aaPredicted RBP4.77□□□□□ -1.65
SRIP3-201ENST00000413200 TAOK2Q9UL54 1235 aa4.77□□□□□ -1.65
SRIP3-201ENST00000413200 PRR29P0C7W0 189 aa4.76□□□□□ -1.65
SRIP3-201ENST00000413200 BBXQ8WY36 941 aaPredicted RBP4.76□□□□□ -1.65
SRIP3-201ENST00000413200 CFAP44Q96MT7 982 aa4.76□□□□□ -1.65
SRIP3-201ENST00000413200 CREBZFQ9NS37 354 aa4.74□□□□□ -1.65
SRIP3-201ENST00000413200 PLEKHG5O94827 1062 aa4.73□□□□□ -1.65
SRIP3-201ENST00000413200 TSHZ2Q9NRE2 1034 aa4.73□□□□□ -1.65
SRIP3-201ENST00000413200 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.73□□□□□ -1.65
SRIP3-201ENST00000413200 TPRNQ4KMQ1 711 aa4.72□□□□□ -1.65
SRIP3-201ENST00000413200 CHADLQ6NUI6 762 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms