RNA–Protein interactions for RNA: ENST00000411856.1

AC003975.1-201, humanhuman

TSL 3 BASIC

Gene AC003975.1, Length 837 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003975.1-201ENST00000411856 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
AC003975.1-201ENST00000411856 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
AC003975.1-201ENST00000411856 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
AC003975.1-201ENST00000411856 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
AC003975.1-201ENST00000411856 PLPPR3Q6T4P5 718 aa17.7■□□□□ 0.42
AC003975.1-201ENST00000411856 ADRA2BP18089 450 aa16.64■□□□□ 0.25
AC003975.1-201ENST00000411856 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
AC003975.1-201ENST00000411856 FOXD1Q16676 465 aa16.49■□□□□ 0.23
AC003975.1-201ENST00000411856 KCNA4P22459 653 aa16.26■□□□□ 0.19
AC003975.1-201ENST00000411856 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
AC003975.1-201ENST00000411856 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
AC003975.1-201ENST00000411856 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
AC003975.1-201ENST00000411856 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
AC003975.1-201ENST00000411856 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
AC003975.1-201ENST00000411856 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
AC003975.1-201ENST00000411856 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
AC003975.1-201ENST00000411856 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
AC003975.1-201ENST00000411856 ZBTB22O15209 634 aa15.03■□□□□ -0
AC003975.1-201ENST00000411856 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
AC003975.1-201ENST00000411856 MSH5O43196 834 aa14.84□□□□□ -0.03
AC003975.1-201ENST00000411856 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
AC003975.1-201ENST00000411856 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
AC003975.1-201ENST00000411856 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
AC003975.1-201ENST00000411856 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
AC003975.1-201ENST00000411856 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
AC003975.1-201ENST00000411856 DMRT2Q9Y5R5 561 aa14.37□□□□□ -0.11
AC003975.1-201ENST00000411856 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
AC003975.1-201ENST00000411856 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
AC003975.1-201ENST00000411856 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
AC003975.1-201ENST00000411856 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
AC003975.1-201ENST00000411856 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
AC003975.1-201ENST00000411856 FKBP8Q14318 412 aa13.95□□□□□ -0.18
AC003975.1-201ENST00000411856 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
AC003975.1-201ENST00000411856 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
AC003975.1-201ENST00000411856 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
AC003975.1-201ENST00000411856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.65□□□□□ -0.22
AC003975.1-201ENST00000411856 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
AC003975.1-201ENST00000411856 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
AC003975.1-201ENST00000411856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
AC003975.1-201ENST00000411856 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
AC003975.1-201ENST00000411856 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
AC003975.1-201ENST00000411856 APLP2Q06481 763 aa13.22□□□□□ -0.29
AC003975.1-201ENST00000411856 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
AC003975.1-201ENST00000411856 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
AC003975.1-201ENST00000411856 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
AC003975.1-201ENST00000411856 PROM2Q8N271 834 aa13.15□□□□□ -0.3
AC003975.1-201ENST00000411856 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
AC003975.1-201ENST00000411856 FBLN2P98095 1184 aa13.01□□□□□ -0.33
AC003975.1-201ENST00000411856 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
AC003975.1-201ENST00000411856 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
AC003975.1-201ENST00000411856 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
AC003975.1-201ENST00000411856 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
AC003975.1-201ENST00000411856 POLA2Q14181 598 aa12.93□□□□□ -0.34
AC003975.1-201ENST00000411856 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
AC003975.1-201ENST00000411856 CAPN15O75808 1086 aa12.83□□□□□ -0.36
AC003975.1-201ENST00000411856 PKD2Q13563 968 aa12.82□□□□□ -0.36
AC003975.1-201ENST00000411856 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
AC003975.1-201ENST00000411856 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
AC003975.1-201ENST00000411856 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
AC003975.1-201ENST00000411856 ABCB7O75027 752 aa12.7□□□□□ -0.38
AC003975.1-201ENST00000411856 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
AC003975.1-201ENST00000411856 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
AC003975.1-201ENST00000411856 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
AC003975.1-201ENST00000411856 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
AC003975.1-201ENST00000411856 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
AC003975.1-201ENST00000411856 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
AC003975.1-201ENST00000411856 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
AC003975.1-201ENST00000411856 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
AC003975.1-201ENST00000411856 BCANQ96GW7 911 aa12.53□□□□□ -0.4
AC003975.1-201ENST00000411856 BBXQ8WY36 941 aaPredicted RBP12.52□□□□□ -0.41
AC003975.1-201ENST00000411856 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
AC003975.1-201ENST00000411856 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
AC003975.1-201ENST00000411856 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
AC003975.1-201ENST00000411856 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
AC003975.1-201ENST00000411856 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
AC003975.1-201ENST00000411856 DSG3P32926 999 aa12.48□□□□□ -0.41
AC003975.1-201ENST00000411856 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
AC003975.1-201ENST00000411856 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
AC003975.1-201ENST00000411856 RGL2O15211 777 aa12.45□□□□□ -0.42
AC003975.1-201ENST00000411856 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
AC003975.1-201ENST00000411856 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
AC003975.1-201ENST00000411856 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
AC003975.1-201ENST00000411856 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
AC003975.1-201ENST00000411856 MIER1Q8N108 512 aa12.39□□□□□ -0.43
AC003975.1-201ENST00000411856 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
AC003975.1-201ENST00000411856 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
AC003975.1-201ENST00000411856 POTEDQ86YR6 584 aa12.34□□□□□ -0.43
AC003975.1-201ENST00000411856 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
AC003975.1-201ENST00000411856 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
AC003975.1-201ENST00000411856 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
AC003975.1-201ENST00000411856 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
AC003975.1-201ENST00000411856 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
AC003975.1-201ENST00000411856 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
AC003975.1-201ENST00000411856 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
AC003975.1-201ENST00000411856 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
AC003975.1-201ENST00000411856 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
AC003975.1-201ENST00000411856 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
AC003975.1-201ENST00000411856 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
AC003975.1-201ENST00000411856 NUBP1P53384 320 aa12.07□□□□□ -0.48
AC003975.1-201ENST00000411856 GSE1Q14687 1217 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms