RNA–Protein interactions for RNA: ENST00000410845.1

RNU6-233P-201, Transcript of RNA, U6 small nuclear 233, pseudogene, humanhuman

BASIC

Gene RNU6-233P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-233P-201ENST00000410845 CHIC1Q5VXU3 224 aa29.13■■■□□ 2.25
RNU6-233P-201ENST00000410845 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
RNU6-233P-201ENST00000410845 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
RNU6-233P-201ENST00000410845 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
RNU6-233P-201ENST00000410845 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
RNU6-233P-201ENST00000410845 ADRA2BP18089 450 aa22.49■■□□□ 1.19
RNU6-233P-201ENST00000410845 FOXD1Q16676 465 aa22.46■■□□□ 1.19
RNU6-233P-201ENST00000410845 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
RNU6-233P-201ENST00000410845 KCNA4P22459 653 aa21.9■■□□□ 1.1
RNU6-233P-201ENST00000410845 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
RNU6-233P-201ENST00000410845 PIAS4Q8N2W9 510 aaPredicted RBP21.36■■□□□ 1.01
RNU6-233P-201ENST00000410845 PPP4R3CPQ6ZMV5 832 aa21.32■■□□□ 1
RNU6-233P-201ENST00000410845 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
RNU6-233P-201ENST00000410845 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
RNU6-233P-201ENST00000410845 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
RNU6-233P-201ENST00000410845 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
RNU6-233P-201ENST00000410845 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
RNU6-233P-201ENST00000410845 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
RNU6-233P-201ENST00000410845 MSH5O43196 834 aa20.33■□□□□ 0.85
RNU6-233P-201ENST00000410845 ZBTB22O15209 634 aa20.19■□□□□ 0.82
RNU6-233P-201ENST00000410845 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
RNU6-233P-201ENST00000410845 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
RNU6-233P-201ENST00000410845 RNF216Q9NWF9 866 aaPredicted RBP19.9■□□□□ 0.78
RNU6-233P-201ENST00000410845 FOXD4L1Q9NU39 408 aa19.89■□□□□ 0.77
RNU6-233P-201ENST00000410845 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
RNU6-233P-201ENST00000410845 DMRT2Q9Y5R5 561 aa19.59■□□□□ 0.73
RNU6-233P-201ENST00000410845 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
RNU6-233P-201ENST00000410845 ATXN8OSP0DMR3 200 aa19.17■□□□□ 0.66
RNU6-233P-201ENST00000410845 MYCNP04198 464 aaPredicted RBP19.13■□□□□ 0.65
RNU6-233P-201ENST00000410845 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
RNU6-233P-201ENST00000410845 RTN4Q9NQC3 1192 aaKnown RBP18.76■□□□□ 0.59
RNU6-233P-201ENST00000410845 FKBP8Q14318 412 aa18.73■□□□□ 0.59
RNU6-233P-201ENST00000410845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
RNU6-233P-201ENST00000410845 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
RNU6-233P-201ENST00000410845 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
RNU6-233P-201ENST00000410845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
RNU6-233P-201ENST00000410845 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
RNU6-233P-201ENST00000410845 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
RNU6-233P-201ENST00000410845 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
RNU6-233P-201ENST00000410845 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
RNU6-233P-201ENST00000410845 ZNF219Q9P2Y4 722 aaPredicted RBP18.14■□□□□ 0.49
RNU6-233P-201ENST00000410845 APLP2Q06481 763 aa18.08■□□□□ 0.48
RNU6-233P-201ENST00000410845 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
RNU6-233P-201ENST00000410845 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.44
RNU6-233P-201ENST00000410845 MKRN4PQ13434 485 aaPredicted RBP17.82■□□□□ 0.44
RNU6-233P-201ENST00000410845 PROM2Q8N271 834 aa17.8■□□□□ 0.44
RNU6-233P-201ENST00000410845 FBLN2P98095 1184 aa17.67■□□□□ 0.42
RNU6-233P-201ENST00000410845 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
RNU6-233P-201ENST00000410845 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
RNU6-233P-201ENST00000410845 VASPP50552 380 aaPredicted RBP17.57■□□□□ 0.4
RNU6-233P-201ENST00000410845 POLA2Q14181 598 aa17.56■□□□□ 0.4
RNU6-233P-201ENST00000410845 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
RNU6-233P-201ENST00000410845 CAPN15O75808 1086 aa17.43■□□□□ 0.38
RNU6-233P-201ENST00000410845 IFNLR1Q8IU57 520 aaPredicted RBP17.42■□□□□ 0.38
RNU6-233P-201ENST00000410845 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
RNU6-233P-201ENST00000410845 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
RNU6-233P-201ENST00000410845 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
RNU6-233P-201ENST00000410845 PKD2Q13563 968 aa17.23■□□□□ 0.35
RNU6-233P-201ENST00000410845 ABCB7O75027 752 aa17.19■□□□□ 0.34
RNU6-233P-201ENST00000410845 DCAF8L2P0C7V8 631 aa17.05■□□□□ 0.32
RNU6-233P-201ENST00000410845 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
RNU6-233P-201ENST00000410845 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
RNU6-233P-201ENST00000410845 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
RNU6-233P-201ENST00000410845 DSG3P32926 999 aa17.01■□□□□ 0.31
RNU6-233P-201ENST00000410845 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
RNU6-233P-201ENST00000410845 SPDYE6P0CI01 402 aa17■□□□□ 0.31
RNU6-233P-201ENST00000410845 SPDYE2Q495Y8 402 aa17■□□□□ 0.31
RNU6-233P-201ENST00000410845 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
RNU6-233P-201ENST00000410845 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
RNU6-233P-201ENST00000410845 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
RNU6-233P-201ENST00000410845 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
RNU6-233P-201ENST00000410845 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
RNU6-233P-201ENST00000410845 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
RNU6-233P-201ENST00000410845 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
RNU6-233P-201ENST00000410845 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
RNU6-233P-201ENST00000410845 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNU6-233P-201ENST00000410845 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
RNU6-233P-201ENST00000410845 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
RNU6-233P-201ENST00000410845 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
RNU6-233P-201ENST00000410845 MIER1Q8N108 512 aa16.77■□□□□ 0.28
RNU6-233P-201ENST00000410845 BCANQ96GW7 911 aa16.75■□□□□ 0.27
RNU6-233P-201ENST00000410845 RGL2O15211 777 aa16.72■□□□□ 0.27
RNU6-233P-201ENST00000410845 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
RNU6-233P-201ENST00000410845 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
RNU6-233P-201ENST00000410845 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
RNU6-233P-201ENST00000410845 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
RNU6-233P-201ENST00000410845 CFAP44Q96MT7 982 aa16.57■□□□□ 0.24
RNU6-233P-201ENST00000410845 SPRYD3Q8NCJ5 442 aa16.54■□□□□ 0.24
RNU6-233P-201ENST00000410845 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
RNU6-233P-201ENST00000410845 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
RNU6-233P-201ENST00000410845 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
RNU6-233P-201ENST00000410845 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
RNU6-233P-201ENST00000410845 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
RNU6-233P-201ENST00000410845 PRKCSHP14314 528 aaPredicted RBP16.41■□□□□ 0.22
RNU6-233P-201ENST00000410845 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
RNU6-233P-201ENST00000410845 GSE1Q14687 1217 aa16.37■□□□□ 0.21
RNU6-233P-201ENST00000410845 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
RNU6-233P-201ENST00000410845 NUBP1P53384 320 aa16.33■□□□□ 0.2
RNU6-233P-201ENST00000410845 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
RNU6-233P-201ENST00000410845 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms