RNA–Protein interactions for RNA: ENST00000410666.1

RNU2-49P-201, Transcript of RNA, U2 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU2-49P, Length 184 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-49P-201ENST00000410666 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
RNU2-49P-201ENST00000410666 CHIC1Q5VXU3 224 aa10.35□□□□□ -0.75
RNU2-49P-201ENST00000410666 SENP3Q9H4L4 574 aaPredicted RBP9.38□□□□□ -0.91
RNU2-49P-201ENST00000410666 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.93
RNU2-49P-201ENST00000410666 FOXD1Q16676 465 aa8.8□□□□□ -1
RNU2-49P-201ENST00000410666 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
RNU2-49P-201ENST00000410666 MSH5O43196 834 aa8.22□□□□□ -1.09
RNU2-49P-201ENST00000410666 PLPPR3Q6T4P5 718 aa8.2□□□□□ -1.1
RNU2-49P-201ENST00000410666 PPP6R1Q9UPN7 881 aa8.18□□□□□ -1.1
RNU2-49P-201ENST00000410666 PIAS4Q8N2W9 510 aaPredicted RBP8.17□□□□□ -1.1
RNU2-49P-201ENST00000410666 ADRA2BP18089 450 aa8.13□□□□□ -1.11
RNU2-49P-201ENST00000410666 MAPK8IP2Q13387 824 aaPredicted RBP7.51□□□□□ -1.21
RNU2-49P-201ENST00000410666 DMRT2Q9Y5R5 561 aa7.44□□□□□ -1.22
RNU2-49P-201ENST00000410666 EHMT2Q96KQ7 1210 aa7.42□□□□□ -1.22
RNU2-49P-201ENST00000410666 KCNA4P22459 653 aa7.38□□□□□ -1.23
RNU2-49P-201ENST00000410666 SCAF1Q9H7N4 1312 aaKnown RBP7.36□□□□□ -1.23
RNU2-49P-201ENST00000410666 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
RNU2-49P-201ENST00000410666 SLC4A1APQ9BWU0 796 aaKnown RBP7.18□□□□□ -1.26
RNU2-49P-201ENST00000410666 NCBP3Q53F19 620 aaKnown RBP7.16□□□□□ -1.26
RNU2-49P-201ENST00000410666 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
RNU2-49P-201ENST00000410666 CACNB1Q02641 598 aaPredicted RBP7.13□□□□□ -1.27
RNU2-49P-201ENST00000410666 DCAF8L1A6NGE4 600 aa7.12□□□□□ -1.27
RNU2-49P-201ENST00000410666 CSRNP3Q8WYN3 585 aa7.1□□□□□ -1.27
RNU2-49P-201ENST00000410666 CNKSR2Q8WXI2 1034 aa7.07□□□□□ -1.28
RNU2-49P-201ENST00000410666 RNF39Q9H2S5 420 aa7.04□□□□□ -1.28
RNU2-49P-201ENST00000410666 RNF216Q9NWF9 866 aaPredicted RBP7.04□□□□□ -1.28
RNU2-49P-201ENST00000410666 NPM3O75607 178 aaKnown RBP6.92□□□□□ -1.3
RNU2-49P-201ENST00000410666 C1QBPQ07021 282 aaKnown RBP6.9□□□□□ -1.3
RNU2-49P-201ENST00000410666 DNAJC5BQ9UF47 199 aa6.87□□□□□ -1.31
RNU2-49P-201ENST00000410666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.77□□□□□ -1.33
RNU2-49P-201ENST00000410666 FOXD4L1Q9NU39 408 aa6.77□□□□□ -1.33
RNU2-49P-201ENST00000410666 ZBTB22O15209 634 aa6.76□□□□□ -1.33
RNU2-49P-201ENST00000410666 SLC24A1O60721 1099 aa6.75□□□□□ -1.33
RNU2-49P-201ENST00000410666 AMER1Q5JTC6 1135 aaPredicted RBP6.74□□□□□ -1.33
RNU2-49P-201ENST00000410666 U3KPZ7 1027 aaPredicted RBP6.65□□□□□ -1.34
RNU2-49P-201ENST00000410666 SPINK5Q9NQ38 1064 aaPredicted RBP6.6□□□□□ -1.35
RNU2-49P-201ENST00000410666 RTN4Q9NQC3 1192 aaKnown RBP6.59□□□□□ -1.35
RNU2-49P-201ENST00000410666 DSG3P32926 999 aa6.56□□□□□ -1.36
RNU2-49P-201ENST00000410666 CAPN15O75808 1086 aa6.55□□□□□ -1.36
RNU2-49P-201ENST00000410666 ATXN8OSP0DMR3 200 aa6.55□□□□□ -1.36
RNU2-49P-201ENST00000410666 SLC4A2P04920 1241 aa6.54□□□□□ -1.36
RNU2-49P-201ENST00000410666 MYCNP04198 464 aaPredicted RBP6.48□□□□□ -1.37
RNU2-49P-201ENST00000410666 FKBP8Q14318 412 aa6.44□□□□□ -1.38
RNU2-49P-201ENST00000410666 TRHP20396 242 aaPredicted RBP6.43□□□□□ -1.38
RNU2-49P-201ENST00000410666 POTEHQ6S545 545 aa6.42□□□□□ -1.38
RNU2-49P-201ENST00000410666 ABCB7O75027 752 aa6.41□□□□□ -1.38
RNU2-49P-201ENST00000410666 ZNF219Q9P2Y4 722 aaPredicted RBP6.38□□□□□ -1.39
RNU2-49P-201ENST00000410666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.36□□□□□ -1.39
RNU2-49P-201ENST00000410666 APLP2Q06481 763 aa6.36□□□□□ -1.39
RNU2-49P-201ENST00000410666 HNRNPUL2Q1KMD3 747 aaKnown RBP6.36□□□□□ -1.39
RNU2-49P-201ENST00000410666 SAMD1Q6SPF0 538 aaPredicted RBP6.33□□□□□ -1.4
RNU2-49P-201ENST00000410666 POLA2Q14181 598 aa6.25□□□□□ -1.41
RNU2-49P-201ENST00000410666 FBXO3Q9UK99 471 aa6.23□□□□□ -1.41
RNU2-49P-201ENST00000410666 RBM42Q9BTD8 480 aaKnown RBP6.21□□□□□ -1.42
RNU2-49P-201ENST00000410666 ATF5Q9Y2D1 282 aaPredicted RBP6.19□□□□□ -1.42
RNU2-49P-201ENST00000410666 CHRDL2Q6WN34 429 aa6.15□□□□□ -1.42
RNU2-49P-201ENST00000410666 PLCB2Q00722 1185 aa6.13□□□□□ -1.43
RNU2-49P-201ENST00000410666 AKT1S1Q96B36 256 aa6.07□□□□□ -1.44
RNU2-49P-201ENST00000410666 SPDYE4A6NLX3 237 aa6.06□□□□□ -1.44
RNU2-49P-201ENST00000410666 BCANQ96GW7 911 aa6.06□□□□□ -1.44
RNU2-49P-201ENST00000410666 VASPP50552 380 aaPredicted RBP6.05□□□□□ -1.44
RNU2-49P-201ENST00000410666 ZBTB12Q9Y330 459 aaPredicted RBP6.05□□□□□ -1.44
RNU2-49P-201ENST00000410666 REM2Q8IYK8 340 aaPredicted RBP6.04□□□□□ -1.44
RNU2-49P-201ENST00000410666 OSCARQ8IYS5 282 aa6.04□□□□□ -1.44
RNU2-49P-201ENST00000410666 PROM2Q8N271 834 aa6.03□□□□□ -1.44
RNU2-49P-201ENST00000410666 HAP1P54257 671 aaPredicted RBP6.02□□□□□ -1.45
RNU2-49P-201ENST00000410666 FBLN2P98095 1184 aa6.02□□□□□ -1.45
RNU2-49P-201ENST00000410666 DCAF8L2P0C7V8 631 aa6.01□□□□□ -1.45
RNU2-49P-201ENST00000410666 PIP4P2Q8N4L2 257 aa6□□□□□ -1.45
RNU2-49P-201ENST00000410666 VSIG10Q8N0Z9 540 aa5.99□□□□□ -1.45
RNU2-49P-201ENST00000410666 PITPNM1O00562 1244 aa5.97□□□□□ -1.45
RNU2-49P-201ENST00000410666 SP7Q8TDD2 431 aaPredicted RBP5.97□□□□□ -1.45
RNU2-49P-201ENST00000410666 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.96□□□□□ -1.46
RNU2-49P-201ENST00000410666 FXR2P51116 673 aaKnown RBP eCLIP5.94□□□□□ -1.46
RNU2-49P-201ENST00000410666 IFNLR1Q8IU57 520 aaPredicted RBP5.92□□□□□ -1.46
RNU2-49P-201ENST00000410666 TAOK2Q9UL54 1235 aa5.91□□□□□ -1.46
RNU2-49P-201ENST00000410666 HAX1O00165 279 aa5.9□□□□□ -1.46
RNU2-49P-201ENST00000410666 BBXQ8WY36 941 aaPredicted RBP5.9□□□□□ -1.46
RNU2-49P-201ENST00000410666 MKRN4PQ13434 485 aaPredicted RBP5.89□□□□□ -1.47
RNU2-49P-201ENST00000410666 PKD2Q13563 968 aa5.89□□□□□ -1.47
RNU2-49P-201ENST00000410666 SPDYE2BA6NHP3 402 aa5.88□□□□□ -1.47
RNU2-49P-201ENST00000410666 SPDYE6P0CI01 402 aa5.88□□□□□ -1.47
RNU2-49P-201ENST00000410666 EVX2Q03828 476 aa5.88□□□□□ -1.47
RNU2-49P-201ENST00000410666 SPDYE2Q495Y8 402 aa5.88□□□□□ -1.47
RNU2-49P-201ENST00000410666 SPOCK2Q92563 424 aa5.87□□□□□ -1.47
RNU2-49P-201ENST00000410666 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
RNU2-49P-201ENST00000410666 KLHL34Q8N239 644 aa5.84□□□□□ -1.47
RNU2-49P-201ENST00000410666 ECM2O94769 699 aaPredicted RBP5.83□□□□□ -1.48
RNU2-49P-201ENST00000410666 CLEC11AQ9Y240 323 aa5.82□□□□□ -1.48
RNU2-49P-201ENST00000410666 PRKAR2AP13861 404 aaKnown RBP5.81□□□□□ -1.48
RNU2-49P-201ENST00000410666 PAXIP1Q6ZW49 1069 aaPredicted RBP5.81□□□□□ -1.48
RNU2-49P-201ENST00000410666 ZNF692Q9BU19 519 aaPredicted RBP5.81□□□□□ -1.48
RNU2-49P-201ENST00000410666 SSUH2Q9Y2M2 353 aa5.81□□□□□ -1.48
RNU2-49P-201ENST00000410666 SPDYE1Q8NFV5 336 aaPredicted RBP5.8□□□□□ -1.48
RNU2-49P-201ENST00000410666 TPRNQ4KMQ1 711 aa5.79□□□□□ -1.48
RNU2-49P-201ENST00000410666 SPRYD3Q8NCJ5 442 aa5.79□□□□□ -1.48
RNU2-49P-201ENST00000410666 ZBTB47Q9UFB7 747 aaPredicted RBP5.79□□□□□ -1.48
RNU2-49P-201ENST00000410666 PLEKHG5O94827 1062 aa5.78□□□□□ -1.48
RNU2-49P-201ENST00000410666 PRKCSHP14314 528 aaPredicted RBP5.78□□□□□ -1.48
RNU2-49P-201ENST00000410666 PLCD3Q8N3E9 789 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms